RNA–Protein interactions for RNA: YNL224C

SQS1, Transcript of Protein that stimulates the ATPase and helicase activities of Prp43p, yeast

Gene SQS1, Length 2,304 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SQS1	YNL224C	TIM17	P39515	158 aa		2.7	□□□□□ -1.98
SQS1	YNL224C	RSM19	P53733	91 aa	Predicted RBP	2.7	□□□□□ -1.98
SQS1	YNL224C	RPL22B	P56628	122 aa	Known RBP	2.7	□□□□□ -1.98
SQS1	YNL224C	YMR175W-A	Q3E766	64 aa		2.7	□□□□□ -1.98
SQS1	YNL224C	YAL063C-A	Q3E791	96 aa		2.7	□□□□□ -1.98
SQS1	YNL224C	YOL162W	P0CF19	215 aa		2.7	□□□□□ -1.98
SQS1	YNL224C	URA5	P13298	226 aa	Known RBP	2.7	□□□□□ -1.98
SQS1	YNL224C	DDR48	P18899	430 aa	Known RBP	2.7	□□□□□ -1.98
SQS1	YNL224C	HSP12	P22943	109 aa	Known RBP	2.7	□□□□□ -1.98
SQS1	YNL224C	ERG4	P25340	473 aa		2.7	□□□□□ -1.98
SQS1	YNL224C	CSE2	P33308	149 aa		2.7	□□□□□ -1.98
SQS1	YNL224C	YNL217W	P40152	326 aa		2.7	□□□□□ -1.98
SQS1	YNL224C	YFL019C	P43576	117 aa		2.7	□□□□□ -1.98
SQS1	YNL224C	YJL028W	P47062	111 aa		2.7	□□□□□ -1.98
SQS1	YNL224C	YIL102C-A	Q2V2P5	75 aa		2.7	□□□□□ -1.98
SQS1	YNL224C	ODC2	Q99297	307 aa		2.7	□□□□□ -1.98
SQS1	YNL224C	YOR093C	Q12275	1648 aa		2.69	□□□□□ -1.98
SQS1	YNL224C	PAU19	P0CE85	124 aa		2.69	□□□□□ -1.98
SQS1	YNL224C	PAU21	P0CE86	164 aa		2.69	□□□□□ -1.98
SQS1	YNL224C	PAU22	P0CE87	164 aa		2.69	□□□□□ -1.98
SQS1	YNL224C	PAU3	P25610	124 aa		2.69	□□□□□ -1.98
SQS1	YNL224C	HSP10	P38910	106 aa		2.69	□□□□□ -1.98
SQS1	YNL224C	VPS25	P47142	202 aa		2.69	□□□□□ -1.98
SQS1	YNL224C	YDL242W	Q07746	117 aa		2.69	□□□□□ -1.98
SQS1	YNL224C	IRC25	Q07951	179 aa		2.69	□□□□□ -1.98
SQS1	YNL224C	YLR363W-A	Q3E747	85 aa		2.69	□□□□□ -1.98
SQS1	YNL224C	HTL1	Q9URQ5	78 aa		2.69	□□□□□ -1.98
SQS1	YNL224C	YRF1-1	P0CX20	1796 aa		2.69	□□□□□ -1.98
SQS1	YNL224C	YRF1-5	P0CX21	1796 aa		2.69	□□□□□ -1.98
SQS1	YNL224C	YRF1-8	P0CX22	1796 aa		2.69	□□□□□ -1.98
SQS1	YNL224C	YKL044W	P36092	106 aa		2.69	□□□□□ -1.98
SQS1	YNL224C	YPT10	P38146	199 aa		2.69	□□□□□ -1.98
SQS1	YNL224C	YFR035C	P43608	114 aa		2.69	□□□□□ -1.98
SQS1	YNL224C	RRT7	Q07829	113 aa		2.69	□□□□□ -1.98
SQS1	YNL224C	YOR292C	Q08743	309 aa		2.69	□□□□□ -1.98
SQS1	YNL224C	YOR385W	Q08909	290 aa		2.69	□□□□□ -1.98
SQS1	YNL224C	YPL264C	Q08980	353 aa		2.69	□□□□□ -1.98
SQS1	YNL224C	YFR032C-B	Q8TGU2	87 aa		2.69	□□□□□ -1.98
SQS1	YNL224C	ECM34	P38728	170 aa		2.68	□□□□□ -1.98
SQS1	YNL224C	PCL5	P38794	229 aa		2.68	□□□□□ -1.98
SQS1	YNL224C	SVP26	P38869	228 aa		2.68	□□□□□ -1.98
SQS1	YNL224C	PEP8	P40335	379 aa		2.68	□□□□□ -1.98
SQS1	YNL224C	YIA6	P40556	373 aa		2.68	□□□□□ -1.98
SQS1	YNL224C	SKI6	P46948	246 aa	Predicted RBP	2.68	□□□□□ -1.98
SQS1	YNL224C	MIC27	P50945	234 aa		2.68	□□□□□ -1.98
SQS1	YNL224C	YGR045C	P53229	120 aa		2.68	□□□□□ -1.98
SQS1	YNL224C	YLR296W	Q05898	108 aa		2.68	□□□□□ -1.98
SQS1	YNL224C	ATG41	Q12048	136 aa		2.68	□□□□□ -1.98
SQS1	YNL224C	MDH2	P22133	377 aa		2.68	□□□□□ -1.98
SQS1	YNL224C	BET1	P22804	142 aa		2.68	□□□□□ -1.98
SQS1	YNL224C	SWD3	P38123	315 aa		2.68	□□□□□ -1.98
SQS1	YNL224C	CTP1	P38152	299 aa		2.68	□□□□□ -1.98
SQS1	YNL224C	TES1	P41903	349 aa	Known RBP	2.68	□□□□□ -1.98
SQS1	YNL224C	TDA4	P47153	279 aa		2.68	□□□□□ -1.98
SQS1	YNL224C	MTR3	P48240	250 aa	Predicted RBP	2.68	□□□□□ -1.98
SQS1	YNL224C	YGL193C	P53097	103 aa		2.68	□□□□□ -1.98
SQS1	YNL224C	YGR018C	P53211	109 aa		2.68	□□□□□ -1.98
SQS1	YNL224C	YDR102C	Q03864	110 aa		2.68	□□□□□ -1.98
SQS1	YNL224C	RIM9	Q04734	239 aa		2.68	□□□□□ -1.98
SQS1	YNL224C	VMR1	P38735	1592 aa		2.67	□□□□□ -1.98
SQS1	YNL224C	SEC11	P15367	167 aa		2.67	□□□□□ -1.98
SQS1	YNL224C	YCR025C	P25352	136 aa		2.67	□□□□□ -1.98
SQS1	YNL224C	RPB7	P34087	171 aa		2.67	□□□□□ -1.98
SQS1	YNL224C	OM14	P38325	134 aa		2.67	□□□□□ -1.98
SQS1	YNL224C	SNF11	P38956	169 aa		2.67	□□□□□ -1.98
SQS1	YNL224C	BOL2	P53082	120 aa		2.67	□□□□□ -1.98
SQS1	YNL224C	YER175W-A	Q8TGU4	54 aa		2.67	□□□□□ -1.98
SQS1	YNL224C	RNQ1	P25367	405 aa		2.67	□□□□□ -1.98
SQS1	YNL224C	PAU16	P35994	123 aa		2.67	□□□□□ -1.98
SQS1	YNL224C	GPX1	P36014	167 aa		2.67	□□□□□ -1.98
SQS1	YNL224C	NRG2	P38082	220 aa		2.67	□□□□□ -1.98
SQS1	YNL224C	YHL042W	P38729	150 aa		2.67	□□□□□ -1.98
SQS1	YNL224C	RRT13	P40042	185 aa		2.67	□□□□□ -1.98
SQS1	YNL224C	YER135C	P40082	130 aa		2.67	□□□□□ -1.98
SQS1	YNL224C	CDC1	P40986	491 aa		2.67	□□□□□ -1.98
SQS1	YNL224C	LST8	P41318	303 aa		2.67	□□□□□ -1.98
SQS1	YNL224C	PAU5	P43575	122 aa		2.67	□□□□□ -1.98
SQS1	YNL224C	SYM1	Q06563	197 aa		2.67	□□□□□ -1.98
SQS1	YNL224C	AYT1	Q12226	474 aa		2.67	□□□□□ -1.98
SQS1	YNL224C	YPL247C	Q12523	523 aa		2.67	□□□□□ -1.98
SQS1	YNL224C	CSR2	Q12734	1121 aa		2.67	□□□□□ -1.98
SQS1	YNL224C	YLR365W	Q7LIF2	110 aa		2.67	□□□□□ -1.98
SQS1	YNL224C	YHR213W	P0CI67	198 aa		2.66	□□□□□ -1.98
SQS1	YNL224C	RPS8A	P0CX39	200 aa	Known RBP	2.66	□□□□□ -1.98
SQS1	YNL224C	RPS8B	P0CX40	200 aa	Known RBP	2.66	□□□□□ -1.98
SQS1	YNL224C	YEL045C	P32616	141 aa		2.66	□□□□□ -1.98
SQS1	YNL224C	IGO1	P53897	168 aa		2.66	□□□□□ -1.98
SQS1	YNL224C	YLR346C	Q06139	101 aa		2.66	□□□□□ -1.98
SQS1	YNL224C	NPC2	Q12408	173 aa		2.66	□□□□□ -1.98
SQS1	YNL224C	EMC6	Q12431	108 aa		2.66	□□□□□ -1.98
SQS1	YNL224C	YCR024C-B	Q3E7Z8	88 aa		2.66	□□□□□ -1.98
SQS1	YNL224C	ECM29	P38737	1868 aa		2.66	□□□□□ -1.98
SQS1	YNL224C	NHP2	P32495	156 aa	Predicted RBP	2.65	□□□□□ -1.98
SQS1	YNL224C	TIM12	P32830	109 aa		2.65	□□□□□ -1.98
SQS1	YNL224C	UMP1	P38293	148 aa		2.65	□□□□□ -1.98
SQS1	YNL224C	YFL015C	P43578	164 aa		2.65	□□□□□ -1.98
SQS1	YNL224C	LYS5	P50113	272 aa		2.65	□□□□□ -1.98
SQS1	YNL224C	MIM1	Q08176	113 aa		2.65	□□□□□ -1.98
SQS1	YNL224C	YFL041W-A	Q3E817	63 aa		2.65	□□□□□ -1.98
SQS1	YNL224C	TOM6	P33448	61 aa		2.65	□□□□□ -1.99

Retrieved 100 of 5,963 RNA–protein pairs in 39.9 ms