RNA–Protein interactions for RNA: YNL088W

TOP2, Transcript of Topoisomerase II, yeastyeast

Gene TOP2, Length 4,287 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TOP2YNL088W SWD3P38123 315 aa1.97□□□□□ -2.09
TOP2YNL088W GPI18P38211 433 aa1.97□□□□□ -2.09
TOP2YNL088W DSK2P48510 373 aa1.97□□□□□ -2.09
TOP2YNL088W THG1P53215 237 aaKnown RBP1.97□□□□□ -2.09
TOP2YNL088W PIN3Q06449 215 aa1.97□□□□□ -2.09
TOP2YNL088W POC4Q12245 148 aaPredicted RBP1.97□□□□□ -2.09
TOP2YNL088W MLP2P40457 1679 aa1.97□□□□□ -2.09
TOP2YNL088W DOP1Q03921 1698 aa1.97□□□□□ -2.09
TOP2YNL088W RPS25BP0C0T4 108 aaKnown RBP1.97□□□□□ -2.09
TOP2YNL088W KRE1P17260 313 aa1.97□□□□□ -2.09
TOP2YNL088W SMD3P43321 101 aaKnown RBP1.97□□□□□ -2.09
TOP2YNL088W RSM19P53733 91 aaPredicted RBP1.97□□□□□ -2.09
TOP2YNL088W YNR064CP53750 290 aa1.97□□□□□ -2.09
TOP2YNL088W MHF1Q3E835 90 aa1.97□□□□□ -2.09
TOP2YNL088W UBR1P19812 1950 aa1.97□□□□□ -2.09
TOP2YNL088W MIX23P38162 196 aa1.97□□□□□ -2.09
TOP2YNL088W HYR1P40581 163 aaKnown RBP1.97□□□□□ -2.09
TOP2YNL088W ATG18P43601 500 aa1.97□□□□□ -2.09
TOP2YNL088W PAU23Q07987 124 aa1.97□□□□□ -2.09
TOP2YNL088W PAU17Q12370 124 aa1.97□□□□□ -2.09
TOP2YNL088W ATG40Q99325 256 aa1.97□□□□□ -2.09
TOP2YNL088W YOL162WP0CF19 215 aa1.97□□□□□ -2.09
TOP2YNL088W SNF11P38956 169 aa1.97□□□□□ -2.09
TOP2YNL088W YNL208WP40159 199 aaKnown RBP1.97□□□□□ -2.09
TOP2YNL088W FLX1P40464 311 aa1.97□□□□□ -2.09
TOP2YNL088W ELP6Q04868 273 aa1.97□□□□□ -2.09
TOP2YNL088W ENV10Q99382 181 aa1.97□□□□□ -2.09
TOP2YNL088W YLR419WQ06698 1435 aaKnown RBP1.96□□□□□ -2.1
TOP2YNL088W UTR5P32630 166 aa1.96□□□□□ -2.1
TOP2YNL088W GPI19Q04082 140 aa1.96□□□□□ -2.1
TOP2YNL088W CSI2Q08054 341 aa1.96□□□□□ -2.1
TOP2YNL088W YMR175W-AQ3E766 64 aa1.96□□□□□ -2.1
TOP2YNL088W RRP5Q05022 1729 aaKnown RBP1.96□□□□□ -2.1
TOP2YNL088W MYO1P08964 1928 aa1.96□□□□□ -2.1
TOP2YNL088W NCA3P46955 337 aa1.96□□□□□ -2.1
TOP2YNL088W YML122CQ03207 126 aa1.96□□□□□ -2.1
TOP2YNL088W MRPS8Q03799 155 aa1.96□□□□□ -2.1
TOP2YNL088W RIM9Q04734 239 aa1.96□□□□□ -2.1
TOP2YNL088W USO1P25386 1790 aa1.96□□□□□ -2.1
TOP2YNL088W GDB1Q06625 1536 aa1.96□□□□□ -2.1
TOP2YNL088W SPO14P36126 1683 aa1.96□□□□□ -2.1
TOP2YNL088W YEL045CP32616 141 aa1.96□□□□□ -2.1
TOP2YNL088W YKL044WP36092 106 aa1.96□□□□□ -2.1
TOP2YNL088W TDA2P40045 126 aa1.96□□□□□ -2.1
TOP2YNL088W YDR274CP87283 123 aa1.96□□□□□ -2.1
TOP2YNL088W YDR042CQ03205 200 aa1.96□□□□□ -2.1
TOP2YNL088W LIP1Q03579 150 aa1.96□□□□□ -2.1
TOP2YNL088W YOR385WQ08909 290 aa1.96□□□□□ -2.1
TOP2YNL088W YIL134C-AQ45U18 67 aa1.96□□□□□ -2.1
TOP2YNL088W RPS13P05756 151 aaKnown RBP1.95□□□□□ -2.1
TOP2YNL088W YHL042WP38729 150 aa1.95□□□□□ -2.1
TOP2YNL088W PEP8P40335 379 aa1.95□□□□□ -2.1
TOP2YNL088W YLR296WQ05898 108 aa1.95□□□□□ -2.1
TOP2YNL088W NMA1Q06178 401 aaKnown RBP1.95□□□□□ -2.1
TOP2YNL088W IRC25Q07951 179 aa1.95□□□□□ -2.1
TOP2YNL088W PCC1Q3E833 88 aa1.95□□□□□ -2.1
TOP2YNL088W YNR034W-AQ3E841 98 aa1.95□□□□□ -2.1
TOP2YNL088W MAK31P23059 88 aa1.95□□□□□ -2.1
TOP2YNL088W RPB9P27999 122 aa1.95□□□□□ -2.1
TOP2YNL088W HUR1P45820 110 aa1.95□□□□□ -2.1
TOP2YNL088W ATP20Q12233 115 aa1.95□□□□□ -2.1
TOP2YNL088W SUS1Q6WNK7 96 aa1.95□□□□□ -2.1
TOP2YNL088W TIM9O74700 87 aa1.95□□□□□ -2.1
TOP2YNL088W YHR138CP38841 114 aaPredicted RBP1.95□□□□□ -2.1
TOP2YNL088W DIM1P41819 318 aaKnown RBP1.95□□□□□ -2.1
TOP2YNL088W NAT5Q08689 176 aa1.95□□□□□ -2.1
TOP2YNL088W RPL21BQ12672 160 aaKnown RBP1.95□□□□□ -2.1
TOP2YNL088W HSP26P15992 214 aaKnown RBP RIP-Chip data1.94□□□□□ -2.1not detected
TOP2YNL088W ARC15P40518 154 aaRIP-Chip data1.94□□□□□ -2.1not detected
TOP2YNL088W YHP1Q04116 353 aa1.94□□□□□ -2.1
TOP2YNL088W YLR111WQ12528 110 aa1.94□□□□□ -2.1
TOP2YNL088W YDR119W-AQ2V2P9 66 aa1.94□□□□□ -2.1
TOP2YNL088W RRT15Q3E811 62 aa1.94□□□□□ -2.1
TOP2YNL088W ODC2Q99297 307 aa1.94□□□□□ -2.1
TOP2YNL088W TOM6P33448 61 aa1.94□□□□□ -2.1
TOP2YNL088W YKR045CP36138 183 aa1.94□□□□□ -2.1
TOP2YNL088W UMP1P38293 148 aa1.94□□□□□ -2.1
TOP2YNL088W CYT2Q00873 224 aa1.94□□□□□ -2.1
TOP2YNL088W YMR244WQ04018 355 aa1.94□□□□□ -2.1
TOP2YNL088W MSB2P32334 1306 aa1.94□□□□□ -2.1
TOP2YNL088W PDR5P33302 1511 aaKnown RBP1.94□□□□□ -2.1
TOP2YNL088W BCK1Q01389 1478 aa1.94□□□□□ -2.1
TOP2YNL088W COX4P04037 155 aa1.94□□□□□ -2.1
TOP2YNL088W YJR085CP47131 105 aaKnown RBP1.94□□□□□ -2.1
TOP2YNL088W YLR363W-AQ3E747 85 aa1.94□□□□□ -2.1
TOP2YNL088W SCS22Q6Q595 175 aa1.94□□□□□ -2.1
TOP2YNL088W VTH1P40438 1549 aa1.94□□□□□ -2.1
TOP2YNL088W VTH2P40890 1549 aa1.94□□□□□ -2.1
TOP2YNL088W ECM29P38737 1868 aa1.94□□□□□ -2.1
TOP2YNL088W CHC1P22137 1653 aaKnown RBP1.94□□□□□ -2.1
TOP2YNL088W THO2P53552 1597 aaKnown RBP1.94□□□□□ -2.1
TOP2YNL088W TY4B-HP0C2J7 1802 aa1.93□□□□□ -2.1
TOP2YNL088W FYV5P25585 152 aa1.93□□□□□ -2.1
TOP2YNL088W QCR10P37299 77 aa1.93□□□□□ -2.1
TOP2YNL088W ATX1P38636 73 aa1.93□□□□□ -2.1
TOP2YNL088W CTR2P38865 189 aa1.93□□□□□ -2.1
TOP2YNL088W YEL073CP39974 107 aa1.93□□□□□ -2.1
TOP2YNL088W RPL21AQ02753 160 aaKnown RBP1.93□□□□□ -2.1
TOP2YNL088W YMR295CQ03559 197 aa1.93□□□□□ -2.1
TOP2YNL088W SMT3Q12306 101 aaKnown RBP1.93□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 47.8 ms