RNA–Protein interactions for RNA: YNL086W

SNN1, Transcript of Subunit of the BLOC-1 complex involved in endosomal maturation, yeastyeast

Gene SNN1, Length 309 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNN1YNL086W YOR283WQ12040 230 aaKnown RBP4.1□□□□□ -1.75
SNN1YNL086W POC4Q12245 148 aaPredicted RBP4.1□□□□□ -1.75
SNN1YNL086W YGL118CP53132 145 aa4.09□□□□□ -1.75
SNN1YNL086W YAL067W-AQ8TGK6 75 aa4.09□□□□□ -1.75
SNN1YNL086W NHP6BP11633 99 aaKnown RBP4.08□□□□□ -1.76
SNN1YNL086W YCR025CP25352 136 aa4.08□□□□□ -1.76
SNN1YNL086W HPA3P39979 161 aa4.08□□□□□ -1.76
SNN1YNL086W IRC22P40006 225 aa4.08□□□□□ -1.76
SNN1YNL086W TOM7P53507 60 aa4.08□□□□□ -1.76
SNN1YNL086W VPS28Q02767 242 aa4.08□□□□□ -1.76
SNN1YNL086W YOL160WQ08321 113 aa4.08□□□□□ -1.76
SNN1YNL086W YCT1Q12235 531 aa4.08□□□□□ -1.76
SNN1YNL086W SNU23Q12368 194 aaPredicted RBP4.08□□□□□ -1.76
SNN1YNL086W DFM1Q12743 341 aaKnown RBP4.08□□□□□ -1.76
SNN1YNL086W QCR2P07257 368 aa4.07□□□□□ -1.76
SNN1YNL086W FCY2P17064 533 aa4.07□□□□□ -1.76
SNN1YNL086W MRP17P28778 131 aa4.07□□□□□ -1.76
SNN1YNL086W EDC2P40023 145 aaPredicted RBP4.07□□□□□ -1.76
SNN1YNL086W IMP2P46972 177 aa4.07□□□□□ -1.76
SNN1YNL086W RBL2P48606 106 aaKnown RBP4.07□□□□□ -1.76
SNN1YNL086W YPR063CQ12160 140 aa4.07□□□□□ -1.76
SNN1YNL086W YPS3Q12303 508 aa4.07□□□□□ -1.76
SNN1YNL086W TPI1P00942 248 aaKnown RBP4.06□□□□□ -1.76
SNN1YNL086W CSH1P38287 376 aa4.06□□□□□ -1.76
SNN1YNL086W AIM25P47140 327 aa4.06□□□□□ -1.76
SNN1YNL086W HST4P53688 370 aa4.06□□□□□ -1.76
SNN1YNL086W SEC22P22214 214 aa4.05□□□□□ -1.76
SNN1YNL086W ASP1P38986 381 aaPredicted RBP4.05□□□□□ -1.76
SNN1YNL086W LSM1P47017 172 aaKnown RBP4.05□□□□□ -1.76
SNN1YNL086W ECM19Q06011 112 aa4.05□□□□□ -1.76
SNN1YNL086W YOR385WQ08909 290 aa4.05□□□□□ -1.76
SNN1YNL086W YAL063C-AQ3E791 96 aa4.05□□□□□ -1.76
SNN1YNL086W YOL085CQ99345 113 aa4.05□□□□□ -1.76
SNN1YNL086W ADH1P00330 348 aaKnown RBP4.04□□□□□ -1.76
SNN1YNL086W GOS1P38736 223 aa4.04□□□□□ -1.76
SNN1YNL086W COA4Q05809 96 aa4.04□□□□□ -1.76
SNN1YNL086W RPS25BP0C0T4 108 aaKnown RBP4.03□□□□□ -1.76
SNN1YNL086W SHB17P36136 271 aaKnown RBP4.03□□□□□ -1.76
SNN1YNL086W SPC1P46965 94 aa4.03□□□□□ -1.76
SNN1YNL086W DXO1Q06349 442 aa4.03□□□□□ -1.76
SNN1YNL086W RPS25AQ3E792 108 aaPredicted RBP4.03□□□□□ -1.76
SNN1YNL086W FPR2P32472 135 aa4.02□□□□□ -1.77
SNN1YNL086W SFT2P38166 215 aa4.02□□□□□ -1.77
SNN1YNL086W LSM2P38203 95 aaKnown RBP4.02□□□□□ -1.77
SNN1YNL086W YHR022CP38763 256 aa4.02□□□□□ -1.77
SNN1YNL086W YPL264CQ08980 353 aa4.01□□□□□ -1.77
SNN1YNL086W CCW12Q12127 133 aa4.01□□□□□ -1.77
SNN1YNL086W RDI1Q12434 202 aa4.01□□□□□ -1.77
SNN1YNL086W COX10P21592 462 aa4□□□□□ -1.77
SNN1YNL086W MRPS9P38120 278 aa4□□□□□ -1.77
SNN1YNL086W NIF3P53081 288 aa4□□□□□ -1.77
SNN1YNL086W ORM1P53224 222 aa4□□□□□ -1.77
SNN1YNL086W PDR17P53844 350 aa4□□□□□ -1.77
SNN1YNL086W SNO1Q03144 224 aa4□□□□□ -1.77
SNN1YNL086W MRPS17Q03246 237 aaPredicted RBP4□□□□□ -1.77
SNN1YNL086W YMR090WQ04304 227 aaKnown RBP4□□□□□ -1.77
SNN1YNL086W YPL229WQ99395 206 aa4□□□□□ -1.77
SNN1YNL086W YBR121C-AP0C5L4 52 aa3.99□□□□□ -1.77
SNN1YNL086W EMP24P32803 203 aaKnown RBP3.99□□□□□ -1.77
SNN1YNL086W YPR145C-AQ2V2P0 78 aa3.99□□□□□ -1.77
SNN1YNL086W YDR034C-AP0C289 58 aa3.98□□□□□ -1.77
SNN1YNL086W YJL028WP47062 111 aa3.98□□□□□ -1.77
SNN1YNL086W MIC27P50945 234 aa3.98□□□□□ -1.77
SNN1YNL086W TMA20P89886 181 aaPredicted RBP3.98□□□□□ -1.77
SNN1YNL086W SHH3Q04487 196 aa3.98□□□□□ -1.77
SNN1YNL086W YGR240C-AQ3E786 66 aa3.98□□□□□ -1.77
SNN1YNL086W COA2Q3E823 68 aa3.98□□□□□ -1.77
SNN1YNL086W RTC6O14464 93 aa3.97□□□□□ -1.77
SNN1YNL086W Q0255P03881 472 aa3.97□□□□□ -1.77
SNN1YNL086W SVP26P38869 228 aa3.97□□□□□ -1.77
SNN1YNL086W ERG28P40030 148 aa3.97□□□□□ -1.77
SNN1YNL086W TMA23Q03525 211 aa3.97□□□□□ -1.77
SNN1YNL086W RRT15Q3E811 62 aa3.97□□□□□ -1.77
SNN1YNL086W YLL066W-BQ8TGJ7 56 aa3.97□□□□□ -1.77
SNN1YNL086W RPB3P16370 318 aaKnown RBP3.96□□□□□ -1.78
SNN1YNL086W SER2P42941 309 aa3.96□□□□□ -1.78
SNN1YNL086W SMD1Q02260 146 aaPredicted RBP3.96□□□□□ -1.78
SNN1YNL086W IES3Q12345 250 aa3.96□□□□□ -1.78
SNN1YNL086W YKL183C-AQ3E765 70 aa3.96□□□□□ -1.78
SNN1YNL086W DDI2P0CH63 225 aa3.95□□□□□ -1.78
SNN1YNL086W DDI3P0CH64 225 aa3.95□□□□□ -1.78
SNN1YNL086W CPT1P17898 393 aa3.95□□□□□ -1.78
SNN1YNL086W DSK2P48510 373 aa3.95□□□□□ -1.78
SNN1YNL086W YGR269WP40326 108 aa3.94□□□□□ -1.78
SNN1YNL086W SWM2P40342 146 aa3.94□□□□□ -1.78
SNN1YNL086W LSM7P53905 115 aaKnown RBP3.94□□□□□ -1.78
SNN1YNL086W GCN3P14741 305 aa3.93□□□□□ -1.78
SNN1YNL086W MID2P36027 376 aa3.93□□□□□ -1.78
SNN1YNL086W YBL081WP38180 368 aaKnown RBP3.93□□□□□ -1.78
SNN1YNL086W IPI1P38803 334 aaPredicted RBP3.93□□□□□ -1.78
SNN1YNL086W YNL217WP40152 326 aa3.93□□□□□ -1.78
SNN1YNL086W RRT7Q07829 113 aa3.93□□□□□ -1.78
SNN1YNL086W YBL008W-AQ3E821 79 aa3.93□□□□□ -1.78
SNN1YNL086W NTF2P33331 125 aaKnown RBP3.92□□□□□ -1.78
SNN1YNL086W CWC23P52868 283 aaPredicted RBP3.92□□□□□ -1.78
SNN1YNL086W YMR007WQ03675 126 aa3.92□□□□□ -1.78
SNN1YNL086W YMR253CQ04835 414 aa3.92□□□□□ -1.78
SNN1YNL086W FCF1Q05498 189 aaPredicted RBP3.92□□□□□ -1.78
SNN1YNL086W VAR1P02381 398 aa3.91□□□□□ -1.78
SNN1YNL086W RPL28P02406 149 aaKnown RBP3.91□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 54.9 ms