RNA–Protein interactions for RNA: YNL079C

TPM1, Transcript of Major isoform of tropomyosin, yeast

Gene TPM1, Length 600 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TPM1	YNL079C	LSM8	P47093	109 aa	Known RBP	2.72	□□□□□ -1.97
TPM1	YNL079C	APS2	Q00381	147 aa		2.72	□□□□□ -1.97
TPM1	YNL079C	PAA1	Q12447	191 aa	Known RBP	2.72	□□□□□ -1.97
TPM1	YNL079C	TRA1	P38811	3744 aa		2.71	□□□□□ -1.98
TPM1	YNL079C	HSP12	P22943	109 aa	Known RBP	2.71	□□□□□ -1.98
TPM1	YNL079C	SRP21	P32342	167 aa		2.71	□□□□□ -1.98
TPM1	YNL079C	SSS1	P35179	80 aa		2.71	□□□□□ -1.98
TPM1	YNL079C	YKR045C	P36138	183 aa		2.71	□□□□□ -1.98
TPM1	YNL079C	YBL071C	P38185	102 aa		2.71	□□□□□ -1.98
TPM1	YNL079C	CSH1	P38287	376 aa		2.71	□□□□□ -1.98
TPM1	YNL079C	YHL044W	P38727	235 aa		2.71	□□□□□ -1.98
TPM1	YNL079C	YIL163C	P40448	117 aa		2.71	□□□□□ -1.98
TPM1	YNL079C	YGL185C	P53100	379 aa		2.71	□□□□□ -1.98
TPM1	YNL079C	CGR1	P53188	120 aa		2.71	□□□□□ -1.98
TPM1	YNL079C	ARL3	Q02804	198 aa		2.71	□□□□□ -1.98
TPM1	YNL079C	ADH6	Q04894	360 aa	Known RBP	2.71	□□□□□ -1.98
TPM1	YNL079C	NAT3	Q06504	195 aa		2.71	□□□□□ -1.98
TPM1	YNL079C	MCH1	Q07376	486 aa		2.71	□□□□□ -1.98
TPM1	YNL079C	YPR063C	Q12160	140 aa		2.71	□□□□□ -1.98
TPM1	YNL079C	SMT3	Q12306	101 aa	Known RBP	2.71	□□□□□ -1.98
TPM1	YNL079C	ATO3	Q12359	275 aa		2.71	□□□□□ -1.98
TPM1	YNL079C	DCN1	Q12395	269 aa		2.71	□□□□□ -1.98
TPM1	YNL079C	YGL010W	P25338	174 aa		2.7	□□□□□ -1.98
TPM1	YNL079C	MRPL28	P36527	147 aa		2.7	□□□□□ -1.98
TPM1	YNL079C	DOG2	P38773	246 aa		2.7	□□□□□ -1.98
TPM1	YNL079C	DOG1	P38774	246 aa		2.7	□□□□□ -1.98
TPM1	YNL079C	YHR173C	P38864	112 aa		2.7	□□□□□ -1.98
TPM1	YNL079C	SRP14	P38985	146 aa		2.7	□□□□□ -1.98
TPM1	YNL079C	YIR020C	P40575	100 aa		2.7	□□□□□ -1.98
TPM1	YNL079C	SDH7	Q04401	133 aa		2.7	□□□□□ -1.98
TPM1	YNL079C	FIT2	Q08906	153 aa		2.7	□□□□□ -1.98
TPM1	YNL079C	GEP5	Q12393	293 aa		2.7	□□□□□ -1.98
TPM1	YNL079C	YDL012C	Q12489	107 aa		2.7	□□□□□ -1.98
TPM1	YNL079C	COX2	P00410	251 aa		2.69	□□□□□ -1.98
TPM1	YNL079C	PHO85	P17157	305 aa		2.69	□□□□□ -1.98
TPM1	YNL079C	SUA7	P29055	345 aa	Predicted RBP	2.69	□□□□□ -1.98
TPM1	YNL079C	YKL075C	P36083	450 aa		2.69	□□□□□ -1.98
TPM1	YNL079C	SMP1	P38128	452 aa		2.69	□□□□□ -1.98
TPM1	YNL079C	SFT2	P38166	215 aa		2.69	□□□□□ -1.98
TPM1	YNL079C	RRT1	P38192	103 aa		2.69	□□□□□ -1.98
TPM1	YNL079C	IRC22	P40006	225 aa		2.69	□□□□□ -1.98
TPM1	YNL079C	YIL012W	P40551	113 aa		2.69	□□□□□ -1.98
TPM1	YNL079C	CPD1	P53314	239 aa		2.69	□□□□□ -1.98
TPM1	YNL079C	CYT2	Q00873	224 aa		2.69	□□□□□ -1.98
TPM1	YNL079C	MRX11	Q03079	207 aa		2.69	□□□□□ -1.98
TPM1	YNL079C	CUE4	Q04201	117 aa	Predicted RBP	2.69	□□□□□ -1.98
TPM1	YNL079C	CSI2	Q08054	341 aa		2.69	□□□□□ -1.98
TPM1	YNL079C	YOR105W	Q08504	108 aa		2.69	□□□□□ -1.98
TPM1	YNL079C	FCY1	Q12178	158 aa		2.69	□□□□□ -1.98
TPM1	YNL079C	SPO24	Q3E752	67 aa		2.69	□□□□□ -1.98
TPM1	YNL079C	MRS1	P07266	363 aa		2.68	□□□□□ -1.98
TPM1	YNL079C	QRI5	P32344	111 aa		2.68	□□□□□ -1.98
TPM1	YNL079C	LSM2	P38203	95 aa	Known RBP	2.68	□□□□□ -1.98
TPM1	YNL079C	YBR090C	P38253	122 aa		2.68	□□□□□ -1.98
TPM1	YNL079C	LSM4	P40070	187 aa	Known RBP	2.68	□□□□□ -1.98
TPM1	YNL079C	HST4	P53688	370 aa		2.68	□□□□□ -1.98
TPM1	YNL079C	ATP19	P81451	68 aa		2.68	□□□□□ -1.98
TPM1	YNL079C	RAV2	Q03956	351 aa		2.68	□□□□□ -1.98
TPM1	YNL079C	YNR034W-A	Q3E841	98 aa		2.68	□□□□□ -1.98
TPM1	YNL079C	PRP8	P33334	2413 aa	Known RBP	2.67	□□□□□ -1.98
TPM1	YNL079C	POR1	P04840	283 aa	Known RBP	2.67	□□□□□ -1.98
TPM1	YNL079C	DDI2	P0CH63	225 aa		2.67	□□□□□ -1.98
TPM1	YNL079C	DDI3	P0CH64	225 aa		2.67	□□□□□ -1.98
TPM1	YNL079C	YHR213W	P0CI67	198 aa		2.67	□□□□□ -1.98
TPM1	YNL079C	RPL43A	P0CX25	92 aa	Known RBP	2.67	□□□□□ -1.98
TPM1	YNL079C	RPL43B	P0CX26	92 aa		2.67	□□□□□ -1.98
TPM1	YNL079C	HMRA1	P0CY11	126 aa		2.67	□□□□□ -1.98
TPM1	YNL079C	TIR1	P10863	254 aa		2.67	□□□□□ -1.98
TPM1	YNL079C	CUP2	P15315	225 aa		2.67	□□□□□ -1.98
TPM1	YNL079C	YPS1	P32329	569 aa		2.67	□□□□□ -1.98
TPM1	YNL079C	VMA11	P32842	164 aa		2.67	□□□□□ -1.98
TPM1	YNL079C	MRPL38	P35996	138 aa	Predicted RBP	2.67	□□□□□ -1.98
TPM1	YNL079C	RPB11	P38902	120 aa		2.67	□□□□□ -1.98
TPM1	YNL079C	HUA1	P40325	198 aa		2.67	□□□□□ -1.98
TPM1	YNL079C	IMP2	P46972	177 aa		2.67	□□□□□ -1.98
TPM1	YNL079C	TOM7	P53507	60 aa		2.67	□□□□□ -1.98
TPM1	YNL079C	SWT21	P53873	357 aa	Predicted RBP	2.67	□□□□□ -1.98
TPM1	YNL079C	SEN15	Q04675	128 aa		2.67	□□□□□ -1.98
TPM1	YNL079C	COA6	Q3E846	104 aa		2.67	□□□□□ -1.98
TPM1	YNL079C	YCL001W-B	Q96VH2	84 aa		2.67	□□□□□ -1.98
TPM1	YNL079C	SAL1	D6W196	494 aa		2.66	□□□□□ -1.98
TPM1	YNL079C	PAM17	P36147	197 aa		2.66	□□□□□ -1.98
TPM1	YNL079C	YJL027C	P47063	138 aa	Predicted RBP	2.66	□□□□□ -1.98
TPM1	YNL079C	OST3	P48439	350 aa		2.66	□□□□□ -1.98
TPM1	YNL079C	YMR166C	Q03829	368 aa		2.66	□□□□□ -1.98
TPM1	YNL079C	GIM5	Q04493	163 aa		2.66	□□□□□ -1.98
TPM1	YNL079C	PBP4	Q07362	185 aa	Known RBP	2.66	□□□□□ -1.98
TPM1	YNL079C	IRC23	Q08416	157 aa		2.66	□□□□□ -1.98
TPM1	YNL079C	RPS22B	Q3E7Y3	130 aa	Known RBP	2.66	□□□□□ -1.98
TPM1	YNL079C	YOL085C	Q99345	113 aa		2.66	□□□□□ -1.98
TPM1	YNL079C	Q0297	Q9ZZV8	51 aa		2.66	□□□□□ -1.98
TPM1	YNL079C	MEC1	P38111	2368 aa		2.66	□□□□□ -1.98
TPM1	YNL079C	HTB2	P02294	131 aa		2.65	□□□□□ -1.99
TPM1	YNL079C	MRPL31	P14063	131 aa	Predicted RBP	2.65	□□□□□ -1.99
TPM1	YNL079C	MRPL20	P22354	195 aa	Predicted RBP	2.65	□□□□□ -1.99
TPM1	YNL079C	FZF1	P32805	299 aa		2.65	□□□□□ -1.99
TPM1	YNL079C	AME1	P38313	324 aa		2.65	□□□□□ -1.99
TPM1	YNL079C	GLE2	P40066	365 aa		2.65	□□□□□ -1.99
TPM1	YNL079C	ERV14	P53173	138 aa		2.65	□□□□□ -1.99
TPM1	YNL079C	YGR219W	P53307	113 aa		2.65	□□□□□ -1.99

Retrieved 100 of 5,963 RNA–protein pairs in 38.1 ms