RNA–Protein interactions for RNA: YLR360W

VPS38, Transcript of Part of a Vps34p phosphatidylinositol 3-kinase complex, yeastyeast

Gene VPS38, Length 1,320 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS38YLR360W SVP26P38869 228 aa1.44□□□□□ -2.18
VPS38YLR360W GLE2P40066 365 aa1.44□□□□□ -2.18
VPS38YLR360W PRE6P40303 254 aaKnown RBP1.44□□□□□ -2.18
VPS38YLR360W SWM2P40342 146 aa1.44□□□□□ -2.18
VPS38YLR360W FLX1P40464 311 aa1.44□□□□□ -2.18
VPS38YLR360W SAY1P53324 424 aa1.44□□□□□ -2.18
VPS38YLR360W LSM7P53905 115 aaKnown RBP1.44□□□□□ -2.18
VPS38YLR360W HPT1Q04178 221 aaKnown RBP1.44□□□□□ -2.18
VPS38YLR360W TRM12Q04235 462 aa1.44□□□□□ -2.18
VPS38YLR360W NAT5Q08689 176 aa1.44□□□□□ -2.18
VPS38YLR360W RPS25AQ3E792 108 aaPredicted RBP1.44□□□□□ -2.18
VPS38YLR360W PAI3P01094 68 aa1.43□□□□□ -2.18
VPS38YLR360W SIR2P06700 562 aa1.43□□□□□ -2.18
VPS38YLR360W TAH1P25638 111 aaPredicted RBP1.43□□□□□ -2.18
VPS38YLR360W BUB2P26448 306 aaPredicted RBP1.43□□□□□ -2.18
VPS38YLR360W MRP49P32388 137 aa1.43□□□□□ -2.18
VPS38YLR360W MRPL11P36521 249 aaPredicted RBP1.43□□□□□ -2.18
VPS38YLR360W YNL198CP40166 100 aa1.43□□□□□ -2.18
VPS38YLR360W PAU15P40585 124 aa1.43□□□□□ -2.18
VPS38YLR360W THI74Q04083 370 aa1.43□□□□□ -2.18
VPS38YLR360W ANT1Q06497 328 aa1.43□□□□□ -2.18
VPS38YLR360W PAU23Q07987 124 aa1.43□□□□□ -2.18
VPS38YLR360W PRM3Q08931 133 aa1.43□□□□□ -2.18
VPS38YLR360W YLR118CQ12354 227 aa1.43□□□□□ -2.18
VPS38YLR360W PAU17Q12370 124 aa1.43□□□□□ -2.18
VPS38YLR360W RDI1Q12434 202 aa1.43□□□□□ -2.18
VPS38YLR360W HUT1Q12520 339 aa1.43□□□□□ -2.18
VPS38YLR360W MHF1Q3E835 90 aa1.43□□□□□ -2.18
VPS38YLR360W SUS1Q6WNK7 96 aa1.43□□□□□ -2.18
VPS38YLR360W CPA1P07258 411 aaKnown RBP1.42□□□□□ -2.18
VPS38YLR360W SEC4P07560 215 aaKnown RBP1.42□□□□□ -2.18
VPS38YLR360W HMRA1P0CY11 126 aa1.42□□□□□ -2.18
VPS38YLR360W UBC5P15732 148 aa1.42□□□□□ -2.18
VPS38YLR360W FPR1P20081 114 aaKnown RBP1.42□□□□□ -2.18
VPS38YLR360W MGT1P26188 188 aa1.42□□□□□ -2.18
VPS38YLR360W TRR1P29509 319 aaKnown RBP1.42□□□□□ -2.18
VPS38YLR360W RPS20P38701 121 aaKnown RBP1.42□□□□□ -2.18
VPS38YLR360W RPL14BP38754 138 aaKnown RBP1.42□□□□□ -2.18
VPS38YLR360W GAA1P39012 614 aa1.42□□□□□ -2.18
VPS38YLR360W GCV3P39726 170 aaPredicted RBP1.42□□□□□ -2.18
VPS38YLR360W PEX17P40155 199 aa1.42□□□□□ -2.18
VPS38YLR360W RPL13BP40212 199 aaKnown RBP1.42□□□□□ -2.18
VPS38YLR360W YFL065CP43539 102 aa1.42□□□□□ -2.18
VPS38YLR360W MIC26P50087 233 aa1.42□□□□□ -2.18
VPS38YLR360W YGL230CP53074 147 aa1.42□□□□□ -2.18
VPS38YLR360W MPC1P53157 130 aaKnown RBP1.42□□□□□ -2.18
VPS38YLR360W THG1P53215 237 aaKnown RBP1.42□□□□□ -2.18
VPS38YLR360W HHT1P61830 136 aa1.42□□□□□ -2.18
VPS38YLR360W APS2Q00381 147 aa1.42□□□□□ -2.18
VPS38YLR360W GAS3Q03655 524 aa1.42□□□□□ -2.18
VPS38YLR360W YMR082CQ04276 118 aa1.42□□□□□ -2.18
VPS38YLR360W SPG3Q04398 127 aaPredicted RBP1.42□□□□□ -2.18
VPS38YLR360W AVO2Q04749 426 aa1.42□□□□□ -2.18
VPS38YLR360W YMR320WQ04897 101 aa1.42□□□□□ -2.18
VPS38YLR360W YLR162WQ06235 118 aa1.42□□□□□ -2.18
VPS38YLR360W SWC7Q06707 132 aa1.42□□□□□ -2.18
VPS38YLR360W YPR203WQ08994 102 aa1.42□□□□□ -2.18
VPS38YLR360W TIM9O74700 87 aa1.41□□□□□ -2.18
VPS38YLR360W PAU19P0CE85 124 aa1.41□□□□□ -2.18
VPS38YLR360W PAU21P0CE86 164 aa1.41□□□□□ -2.18
VPS38YLR360W PAU22P0CE87 164 aa1.41□□□□□ -2.18
VPS38YLR360W UBI4P0CG63 381 aaKnown RBP1.41□□□□□ -2.18
VPS38YLR360W INO4P13902 151 aa1.41□□□□□ -2.18
VPS38YLR360W YMR31P19955 123 aa1.41□□□□□ -2.18
VPS38YLR360W PAU3P25610 124 aa1.41□□□□□ -2.18
VPS38YLR360W PAN3P36102 679 aaPredicted RBP1.41□□□□□ -2.18
VPS38YLR360W SHB17P36136 271 aaKnown RBP1.41□□□□□ -2.18
VPS38YLR360W SPC25P40014 221 aa1.41□□□□□ -2.18
VPS38YLR360W CCS1P40202 249 aaKnown RBP1.41□□□□□ -2.18
VPS38YLR360W AIM25P47140 327 aa1.41□□□□□ -2.18
VPS38YLR360W EST3Q03096 181 aa1.41□□□□□ -2.18
VPS38YLR360W RCE1Q03530 315 aa1.41□□□□□ -2.18
VPS38YLR360W FIT1Q04433 528 aa1.41□□□□□ -2.18
VPS38YLR360W GRX8Q05926 109 aa1.41□□□□□ -2.18
VPS38YLR360W YPR174CQ06616 221 aaPredicted RBP1.41□□□□□ -2.18
VPS38YLR360W YOL024WQ08172 172 aa1.41□□□□□ -2.18
VPS38YLR360W YDL157CQ12082 118 aa1.41□□□□□ -2.18
VPS38YLR360W MCP1Q12106 302 aa1.41□□□□□ -2.18
VPS38YLR360W YLR050CQ12155 161 aaKnown RBP1.41□□□□□ -2.18
VPS38YLR360W POC4Q12245 148 aaPredicted RBP1.41□□□□□ -2.18
VPS38YLR360W FAS1P07149 2051 aaKnown RBP1.41□□□□□ -2.18
VPS38YLR360W RPL2AP0CX45 254 aaKnown RBP1.4□□□□□ -2.18
VPS38YLR360W RPL2BP0CX46 254 aaKnown RBP1.4□□□□□ -2.18
VPS38YLR360W HYP2P23301 157 aaKnown RBP1.4□□□□□ -2.18
VPS38YLR360W SPS18P32572 300 aa1.4□□□□□ -2.18
VPS38YLR360W YKL102CP34249 101 aa1.4□□□□□ -2.18
VPS38YLR360W YKR041WP36134 250 aa1.4□□□□□ -2.18
VPS38YLR360W YBR090CP38253 122 aa1.4□□□□□ -2.18
VPS38YLR360W HNT1Q04344 158 aaKnown RBP1.4□□□□□ -2.18
VPS38YLR360W YPR114WQ06107 315 aa1.4□□□□□ -2.18
VPS38YLR360W KEI1Q06346 221 aa1.4□□□□□ -2.18
VPS38YLR360W COX19Q3E731 98 aa1.4□□□□□ -2.18
VPS38YLR360W YKL018C-AQ3E7A7 99 aa1.4□□□□□ -2.18
VPS38YLR360W FIG2P25653 1609 aa1.4□□□□□ -2.19
VPS38YLR360W RPL40AP0CH08 128 aaKnown RBP1.4□□□□□ -2.19
VPS38YLR360W RPL40BP0CH09 128 aaKnown RBP1.4□□□□□ -2.19
VPS38YLR360W ANB1P19211 157 aa1.4□□□□□ -2.19
VPS38YLR360W FZF1P32805 299 aa1.4□□□□□ -2.19
VPS38YLR360W YKR070WP36151 352 aaKnown RBP1.4□□□□□ -2.19
VPS38YLR360W HTD2P38790 280 aaKnown RBP1.4□□□□□ -2.19
Retrieved 100 of 5,963 RNA–protein pairs in 16.5 ms