RNA–Protein interactions for RNA: YLR058C

SHM2, Transcript of Cytosolic serine hydroxymethyltransferase, yeastyeast

Gene SHM2, Length 1,410 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHM2YLR058C MPC2P38857 129 aa7.99□□□□□ -1.13
SHM2YLR058C APS2Q00381 147 aa7.99□□□□□ -1.13
SHM2YLR058C DAD1Q12248 94 aa7.99□□□□□ -1.13
SHM2YLR058C YCL001W-BQ96VH2 84 aa7.99□□□□□ -1.13
SHM2YLR058C QRI5P32344 111 aa7.98□□□□□ -1.13
SHM2YLR058C YDL183CP48569 320 aa7.98□□□□□ -1.13
SHM2YLR058C TRI1Q05024 226 aa7.98□□□□□ -1.13
SHM2YLR058C YBR013CP38215 129 aa7.97□□□□□ -1.13
SHM2YLR058C YFR045WP43617 309 aa7.97□□□□□ -1.13
SHM2YLR058C MIC26P50087 233 aa7.97□□□□□ -1.13
SHM2YLR058C ALG13P53178 202 aa7.97□□□□□ -1.13
SHM2YLR058C YER135CP40082 130 aa7.96□□□□□ -1.13
SHM2YLR058C SPI1P40092 148 aa7.96□□□□□ -1.13
SHM2YLR058C GTT1P40582 234 aa7.96□□□□□ -1.13
SHM2YLR058C PAU5P43575 122 aa7.96□□□□□ -1.13
SHM2YLR058C YPL162CQ12042 273 aa7.96□□□□□ -1.13
SHM2YLR058C AIR2Q12476 344 aaKnown RBP7.96□□□□□ -1.13
SHM2YLR058C YLR342W-AQ3E810 57 aa7.96□□□□□ -1.13
SHM2YLR058C HAM1P47119 197 aaKnown RBP7.95□□□□□ -1.14
SHM2YLR058C VPS71Q03433 280 aa7.95□□□□□ -1.14
SHM2YLR058C CCW12Q12127 133 aa7.95□□□□□ -1.14
SHM2YLR058C CPT1P17898 393 aa7.95□□□□□ -1.14
SHM2YLR058C MDM10P18409 493 aa7.95□□□□□ -1.14
SHM2YLR058C YHR022CP38763 256 aa7.95□□□□□ -1.14
SHM2YLR058C YMR244WQ04018 355 aa7.95□□□□□ -1.14
SHM2YLR058C GIM5Q04493 163 aa7.95□□□□□ -1.14
SHM2YLR058C YNR034W-AQ3E841 98 aa7.95□□□□□ -1.14
SHM2YLR058C CUP2P15315 225 aa7.94□□□□□ -1.14
SHM2YLR058C DAD2P36162 133 aa7.94□□□□□ -1.14
SHM2YLR058C MIX23P38162 196 aa7.94□□□□□ -1.14
SHM2YLR058C YDR274CP87283 123 aa7.94□□□□□ -1.14
SHM2YLR058C GRH1Q04410 372 aaKnown RBP7.94□□□□□ -1.14
SHM2YLR058C UTP23Q12339 254 aaKnown RBP7.94□□□□□ -1.14
SHM2YLR058C MRPL31P14063 131 aaPredicted RBP7.93□□□□□ -1.14
SHM2YLR058C YGR026WP53217 278 aa7.93□□□□□ -1.14
SHM2YLR058C YPR063CQ12160 140 aa7.93□□□□□ -1.14
SHM2YLR058C HMRA1P0CY11 126 aa7.92□□□□□ -1.14
SHM2YLR058C PAM17P36147 197 aa7.92□□□□□ -1.14
SHM2YLR058C MIG3P39943 394 aa7.92□□□□□ -1.14
SHM2YLR058C MRPS8Q03799 155 aa7.92□□□□□ -1.14
SHM2YLR058C PAU19P0CE85 124 aa7.91□□□□□ -1.14
SHM2YLR058C PAU21P0CE86 164 aa7.91□□□□□ -1.14
SHM2YLR058C PAU22P0CE87 164 aa7.91□□□□□ -1.14
SHM2YLR058C PAU3P25610 124 aa7.91□□□□□ -1.14
SHM2YLR058C YJR096WP47137 282 aa7.91□□□□□ -1.14
SHM2YLR058C YOL085CQ99345 113 aa7.91□□□□□ -1.14
SHM2YLR058C GET2P40056 285 aa7.9□□□□□ -1.14
SHM2YLR058C RPB11P38902 120 aa7.89□□□□□ -1.15
SHM2YLR058C IRC22P40006 225 aa7.89□□□□□ -1.15
SHM2YLR058C UPS3Q04006 179 aa7.89□□□□□ -1.15
SHM2YLR058C RPL12AP0CX53 165 aaKnown RBP7.88□□□□□ -1.15
SHM2YLR058C RPL12BP0CX54 165 aa7.88□□□□□ -1.15
SHM2YLR058C TIM22Q12328 207 aa7.88□□□□□ -1.15
SHM2YLR058C CSM4Q08955 156 aa7.87□□□□□ -1.15
SHM2YLR058C YDR215CQ12240 137 aa7.87□□□□□ -1.15
SHM2YLR058C MRPL33P20084 86 aa7.86□□□□□ -1.15
SHM2YLR058C COX16P47081 118 aa7.86□□□□□ -1.15
SHM2YLR058C MSC3Q05812 728 aa7.86□□□□□ -1.15
SHM2YLR058C VAR1P02381 398 aa7.86□□□□□ -1.15
SHM2YLR058C YFR035CP43608 114 aa7.86□□□□□ -1.15
SHM2YLR058C ATG33Q06485 197 aa7.86□□□□□ -1.15
SHM2YLR058C POR1P04840 283 aaKnown RBP7.85□□□□□ -1.15
SHM2YLR058C VMA16P23968 213 aa7.85□□□□□ -1.15
SHM2YLR058C SUR2P38992 349 aa7.85□□□□□ -1.15
SHM2YLR058C PAU7P39545 55 aa7.85□□□□□ -1.15
SHM2YLR058C THG1P53215 237 aaKnown RBP7.85□□□□□ -1.15
SHM2YLR058C YLR281CQ05863 155 aa7.85□□□□□ -1.15
SHM2YLR058C ARC18Q05933 178 aaKnown RBP7.85□□□□□ -1.15
SHM2YLR058C YLR122CQ12312 125 aa7.85□□□□□ -1.15
SHM2YLR058C AGA1P32323 725 aa7.84□□□□□ -1.15
SHM2YLR058C YGR017WP53210 297 aa7.84□□□□□ -1.15
SHM2YLR058C SDS23P53172 527 aa7.83□□□□□ -1.16
SHM2YLR058C DIA1P54005 336 aa7.83□□□□□ -1.16
SHM2YLR058C ATP16Q12165 160 aa7.83□□□□□ -1.16
SHM2YLR058C YCR024C-BQ3E7Z8 88 aa7.83□□□□□ -1.16
SHM2YLR058C RPL2AP0CX45 254 aaKnown RBP7.82□□□□□ -1.16
SHM2YLR058C RPL2BP0CX46 254 aaKnown RBP7.82□□□□□ -1.16
SHM2YLR058C KEG1P43614 200 aa7.82□□□□□ -1.16
SHM2YLR058C RPL27AP0C2H6 136 aaKnown RBP7.81□□□□□ -1.16
SHM2YLR058C RPS11AP0CX47 156 aaKnown RBP7.81□□□□□ -1.16
SHM2YLR058C RPS11BP0CX48 156 aaKnown RBP7.81□□□□□ -1.16
SHM2YLR058C DUO1P53168 247 aaKnown RBP7.81□□□□□ -1.16
SHM2YLR058C COX12Q01519 83 aa7.81□□□□□ -1.16
SHM2YLR058C ARL3Q02804 198 aa7.81□□□□□ -1.16
SHM2YLR058C GTO3Q04806 366 aa7.81□□□□□ -1.16
SHM2YLR058C POM33Q12164 279 aa7.81□□□□□ -1.16
SHM2YLR058C RPS22BQ3E7Y3 130 aaKnown RBP7.81□□□□□ -1.16
SHM2YLR058C RPL23AP0CX41 137 aaKnown RBP7.8□□□□□ -1.16
SHM2YLR058C RPL23BP0CX42 137 aaKnown RBP7.8□□□□□ -1.16
SHM2YLR058C MLF3P32047 452 aa7.8□□□□□ -1.16
SHM2YLR058C ZRT1P32804 376 aa7.8□□□□□ -1.16
SHM2YLR058C YHR140WP38842 239 aa7.8□□□□□ -1.16
SHM2YLR058C YGR149WP48236 432 aa7.8□□□□□ -1.16
SHM2YLR058C CYT2Q00873 224 aa7.8□□□□□ -1.16
SHM2YLR058C GPI19Q04082 140 aa7.8□□□□□ -1.16
SHM2YLR058C YBR200W-AQ3E755 54 aa7.8□□□□□ -1.16
SHM2YLR058C Q0255P03881 472 aa7.79□□□□□ -1.16
SHM2YLR058C TY1A-HP0C2I4 478 aaKnown RBP7.79□□□□□ -1.16
SHM2YLR058C FSF1Q12029 327 aaKnown RBP7.79□□□□□ -1.16
SHM2YLR058C SEC4P07560 215 aaKnown RBP7.78□□□□□ -1.16
Retrieved 100 of 5,963 RNA–protein pairs in 7.2 ms