RNA–Protein interactions for RNA: YLR006C

SSK1, Transcript of Cytoplasmic phosphorelay intermediate osmosensor and regulator, yeastyeast

Gene SSK1, Length 2,139 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSK1YLR006C NAT3Q06504 195 aa4.78□□□□□ -1.64
SSK1YLR006C YER145C-AA0A023PYF4 145 aa4.77□□□□□ -1.65
SSK1YLR006C SPS100P13130 326 aa4.77□□□□□ -1.65
SSK1YLR006C URA5P13298 226 aaKnown RBP4.77□□□□□ -1.65
SSK1YLR006C ATG15P25641 520 aa4.77□□□□□ -1.65
SSK1YLR006C YGL230CP53074 147 aa4.77□□□□□ -1.65
SSK1YLR006C YGR039WP53225 103 aa4.77□□□□□ -1.65
SSK1YLR006C YMR007WQ03675 126 aa4.77□□□□□ -1.65
SSK1YLR006C RIM9Q04734 239 aa4.77□□□□□ -1.65
SSK1YLR006C USV1Q12132 391 aa4.77□□□□□ -1.65
SSK1YLR006C COA6Q3E846 104 aa4.77□□□□□ -1.65
SSK1YLR006C RPS25BP0C0T4 108 aaKnown RBP4.76□□□□□ -1.65
SSK1YLR006C MSI1P13712 422 aa4.76□□□□□ -1.65
SSK1YLR006C IMP1P28627 190 aa4.76□□□□□ -1.65
SSK1YLR006C APS1P35181 156 aa4.76□□□□□ -1.65
SSK1YLR006C CCS1P40202 249 aaKnown RBP4.76□□□□□ -1.65
SSK1YLR006C YDR366CP87287 132 aa4.76□□□□□ -1.65
SSK1YLR006C YMR254CQ04838 102 aa4.76□□□□□ -1.65
SSK1YLR006C FCF1Q05498 189 aaPredicted RBP4.76□□□□□ -1.65
SSK1YLR006C TMA10Q06177 86 aa4.76□□□□□ -1.65
SSK1YLR006C YOR292CQ08743 309 aa4.76□□□□□ -1.65
SSK1YLR006C MPD1Q12404 318 aaKnown RBP4.76□□□□□ -1.65
SSK1YLR006C RPS25AQ3E792 108 aaPredicted RBP4.76□□□□□ -1.65
SSK1YLR006C STE4P18851 423 aa4.76□□□□□ -1.65
SSK1YLR006C YRA2P36036 203 aaKnown RBP RIP-Chip data4.76□□□□□ -1.65not detected
SSK1YLR006C PET8P38921 284 aa4.76□□□□□ -1.65
SSK1YLR006C YGR269WP40326 108 aa4.76□□□□□ -1.65
SSK1YLR006C FIP1P45976 327 aa4.76□□□□□ -1.65
SSK1YLR006C YGR050CP53231 118 aa4.76□□□□□ -1.65
SSK1YLR006C QCR9P22289 66 aa4.75□□□□□ -1.65
SSK1YLR006C YHR140WP38842 239 aa4.75□□□□□ -1.65
SSK1YLR006C RCE1Q03530 315 aa4.75□□□□□ -1.65
SSK1YLR006C PIN3Q06449 215 aa4.75□□□□□ -1.65
SSK1YLR006C YNL277W-AQ3E7Z0 62 aa4.75□□□□□ -1.65
SSK1YLR006C ANB1P19211 157 aa4.75□□□□□ -1.65
SSK1YLR006C YCR007CP25354 239 aa4.75□□□□□ -1.65
SSK1YLR006C PRE5P40302 234 aaKnown RBP4.75□□□□□ -1.65
SSK1YLR006C YFL015CP43578 164 aa4.75□□□□□ -1.65
SSK1YLR006C ECO1P43605 281 aa4.75□□□□□ -1.65
SSK1YLR006C POC4Q12245 148 aaPredicted RBP4.75□□□□□ -1.65
SSK1YLR006C FLO9P39712 1322 aa4.75□□□□□ -1.65
SSK1YLR006C HYP2P23301 157 aaKnown RBP4.74□□□□□ -1.65
SSK1YLR006C ARO2P28777 376 aaKnown RBP4.74□□□□□ -1.65
SSK1YLR006C YBL059WP34224 193 aa4.74□□□□□ -1.65
SSK1YLR006C YGL034CP53186 121 aa4.74□□□□□ -1.65
SSK1YLR006C FCY1Q12178 158 aa4.74□□□□□ -1.65
SSK1YLR006C YDL180WQ12301 547 aa4.74□□□□□ -1.65
SSK1YLR006C ISD11Q6Q560 94 aa4.74□□□□□ -1.65
SSK1YLR006C POR1P04840 283 aaKnown RBP4.73□□□□□ -1.65
SSK1YLR006C RPL9AP05738 191 aaKnown RBP4.73□□□□□ -1.65
SSK1YLR006C YBR090CP38253 122 aa4.73□□□□□ -1.65
SSK1YLR006C OST1P41543 476 aaKnown RBP4.73□□□□□ -1.65
SSK1YLR006C PRY1P47032 299 aa4.73□□□□□ -1.65
SSK1YLR006C ARP3P47117 449 aaKnown RBP4.73□□□□□ -1.65
SSK1YLR006C RPL9BP51401 191 aaKnown RBP4.73□□□□□ -1.65
SSK1YLR006C SHH3Q04487 196 aa4.73□□□□□ -1.65
SSK1YLR006C FIT3Q08907 204 aa4.73□□□□□ -1.65
SSK1YLR006C CSF1Q12150 2958 aa4.73□□□□□ -1.65
SSK1YLR006C UBC5P15732 148 aa4.73□□□□□ -1.65
SSK1YLR006C YNL234WP53857 426 aa4.73□□□□□ -1.65
SSK1YLR006C CYC7P00045 113 aa4.72□□□□□ -1.65
SSK1YLR006C RPS22AP0C0W1 130 aaKnown RBP4.72□□□□□ -1.65
SSK1YLR006C UPS1Q05776 175 aa4.72□□□□□ -1.65
SSK1YLR006C RAF1Q06891 181 aa4.72□□□□□ -1.65
SSK1YLR006C BOL1Q3E793 110 aa4.72□□□□□ -1.65
SSK1YLR006C TOM40P23644 387 aaKnown RBP4.72□□□□□ -1.65
SSK1YLR006C LDB16P25587 256 aa4.72□□□□□ -1.65
SSK1YLR006C YIL163CP40448 117 aa4.72□□□□□ -1.65
SSK1YLR006C DFG10P40526 253 aa4.72□□□□□ -1.65
SSK1YLR006C SBH1P52870 82 aa4.72□□□□□ -1.65
SSK1YLR006C CRH1P53301 507 aa4.72□□□□□ -1.65
SSK1YLR006C NRM1P53718 249 aa4.72□□□□□ -1.65
SSK1YLR006C YDR114CQ04597 100 aa4.72□□□□□ -1.65
SSK1YLR006C SMT3Q12306 101 aaKnown RBP4.72□□□□□ -1.65
SSK1YLR006C AIR2Q12476 344 aaKnown RBP4.72□□□□□ -1.65
SSK1YLR006C YOR032W-AQ8TGS1 66 aa4.72□□□□□ -1.65
SSK1YLR006C UTH1P36135 365 aa4.71□□□□□ -1.66
SSK1YLR006C GON7P46984 123 aa4.71□□□□□ -1.66
SSK1YLR006C YOR105WQ08504 108 aa4.71□□□□□ -1.66
SSK1YLR006C YDR215CQ12240 137 aa4.71□□□□□ -1.66
SSK1YLR006C Q0255P03881 472 aa4.7□□□□□ -1.66
SSK1YLR006C TIR1P10863 254 aa4.7□□□□□ -1.66
SSK1YLR006C COX10P21592 462 aa4.7□□□□□ -1.66
SSK1YLR006C YHR138CP38841 114 aaPredicted RBP4.7□□□□□ -1.66
SSK1YLR006C RPB11P38902 120 aa4.7□□□□□ -1.66
SSK1YLR006C PRM5P40476 318 aa4.7□□□□□ -1.66
SSK1YLR006C GPI2P46961 280 aa4.7□□□□□ -1.66
SSK1YLR006C DSK2P48510 373 aa4.7□□□□□ -1.66
SSK1YLR006C RPL21AQ02753 160 aaKnown RBP4.7□□□□□ -1.66
SSK1YLR006C RPL21BQ12672 160 aaKnown RBP4.7□□□□□ -1.66
SSK1YLR006C HFA1P32874 2273 aa4.7□□□□□ -1.66
SSK1YLR006C AQY1P0CD91 305 aa4.7□□□□□ -1.66
SSK1YLR006C ROX3P25046 220 aa4.7□□□□□ -1.66
SSK1YLR006C MRPL39P36533 70 aa4.7□□□□□ -1.66
SSK1YLR006C MTC6P38849 526 aa4.7□□□□□ -1.66
SSK1YLR006C TEM1P38987 245 aa4.7□□□□□ -1.66
SSK1YLR006C YER084WP40057 128 aa4.7□□□□□ -1.66
SSK1YLR006C YER188WP40103 239 aa4.7□□□□□ -1.66
SSK1YLR006C YPL162CQ12042 273 aa4.7□□□□□ -1.66
SSK1YLR006C FMP27Q06179 2628 aa4.7□□□□□ -1.66
Retrieved 100 of 5,963 RNA–protein pairs in 49.3 ms