RNA–Protein interactions for RNA: YLR005W

SSL1, Transcript of Subunit of the core form of RNA polymerase transcription factor TFIIH, yeastyeast

Gene SSL1, Length 1,386 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSL1YLR005W YMR007WQ03675 126 aa2.69□□□□□ -1.98
SSL1YLR005W FIT2Q08906 153 aa2.69□□□□□ -1.98
SSL1YLR005W UTP23Q12339 254 aaKnown RBP2.69□□□□□ -1.98
SSL1YLR005W RTC6O14464 93 aa2.68□□□□□ -1.98
SSL1YLR005W HTB2P02294 131 aa2.68□□□□□ -1.98
SSL1YLR005W GCN3P14741 305 aa2.68□□□□□ -1.98
SSL1YLR005W AHT1P29589 182 aa2.68□□□□□ -1.98
SSL1YLR005W YBR292CP38357 123 aa2.68□□□□□ -1.98
SSL1YLR005W ASP1P38986 381 aaPredicted RBP2.68□□□□□ -1.98
SSL1YLR005W EMC5P40540 141 aa2.68□□□□□ -1.98
SSL1YLR005W CDC40P40968 455 aaPredicted RBP2.68□□□□□ -1.98
SSL1YLR005W MRPL50P53724 139 aa2.68□□□□□ -1.98
SSL1YLR005W YNR066CP53752 436 aa2.68□□□□□ -1.98
SSL1YLR005W MRPS17Q03246 237 aaPredicted RBP2.68□□□□□ -1.98
SSL1YLR005W PBA1Q05778 276 aa2.68□□□□□ -1.98
SSL1YLR005W LCL2Q08045 131 aa2.68□□□□□ -1.98
SSL1YLR005W FCF2Q12035 217 aaPredicted RBP2.68□□□□□ -1.98
SSL1YLR005W YPR010C-AA5Z2X5 72 aa2.67□□□□□ -1.98
SSL1YLR005W Q0255P03881 472 aa2.67□□□□□ -1.98
SSL1YLR005W AME1P38313 324 aa2.67□□□□□ -1.98
SSL1YLR005W YJL028WP47062 111 aa2.67□□□□□ -1.98
SSL1YLR005W DSK2P48510 373 aa2.67□□□□□ -1.98
SSL1YLR005W BRP1P53194 125 aa2.67□□□□□ -1.98
SSL1YLR005W TIM21P53220 239 aa2.67□□□□□ -1.98
SSL1YLR005W ERI1P62651 68 aaKnown RBP2.67□□□□□ -1.98
SSL1YLR005W AVO2Q04749 426 aa2.67□□□□□ -1.98
SSL1YLR005W SPO13P23624 291 aa2.66□□□□□ -1.98
SSL1YLR005W ACB1P31787 87 aa2.66□□□□□ -1.98
SSL1YLR005W MRPL28P36527 147 aa2.66□□□□□ -1.98
SSL1YLR005W YHR173CP38864 112 aa2.66□□□□□ -1.98
SSL1YLR005W YNL217WP40152 326 aa2.66□□□□□ -1.98
SSL1YLR005W AIM34Q03673 198 aa2.66□□□□□ -1.98
SSL1YLR005W YLR342W-AQ3E810 57 aa2.66□□□□□ -1.98
SSL1YLR005W YOL085CQ99345 113 aa2.66□□□□□ -1.98
SSL1YLR005W UBI4P0CG63 381 aaKnown RBP2.65□□□□□ -1.98
SSL1YLR005W RNA15P25299 296 aaPredicted RBP2.65□□□□□ -1.98
SSL1YLR005W CDC50P25656 391 aa2.65□□□□□ -1.98
SSL1YLR005W RPL16BP26785 198 aaKnown RBP2.65□□□□□ -1.98
SSL1YLR005W YBR013CP38215 129 aa2.65□□□□□ -1.98
SSL1YLR005W RRT13P40042 185 aa2.65□□□□□ -1.98
SSL1YLR005W YGL185CP53100 379 aa2.65□□□□□ -1.98
SSL1YLR005W DAD1Q12248 94 aa2.65□□□□□ -1.98
SSL1YLR005W DFM1Q12743 341 aaKnown RBP2.65□□□□□ -1.98
SSL1YLR005W CKS1P20486 150 aaKnown RBP2.64□□□□□ -1.99
SSL1YLR005W SMD3P43321 101 aaKnown RBP2.64□□□□□ -1.99
SSL1YLR005W YJR111CP47148 283 aaKnown RBP2.64□□□□□ -1.99
SSL1YLR005W YCL001W-AP87012 153 aa2.64□□□□□ -1.99
SSL1YLR005W UPS3Q04006 179 aa2.64□□□□□ -1.99
SSL1YLR005W DPP1Q05521 289 aa2.64□□□□□ -1.99
SSL1YLR005W YLR042CQ07990 161 aa2.64□□□□□ -1.99
SSL1YLR005W YLL066W-BQ8TGJ7 56 aa2.64□□□□□ -1.99
SSL1YLR005W RPL33AP05744 107 aaKnown RBP2.63□□□□□ -1.99
SSL1YLR005W YDR034C-AP0C289 58 aa2.63□□□□□ -1.99
SSL1YLR005W AGA1P32323 725 aa2.63□□□□□ -1.99
SSL1YLR005W HMX1P32339 317 aa2.63□□□□□ -1.99
SSL1YLR005W TRS20P38334 175 aa2.63□□□□□ -1.99
SSL1YLR005W RPL33BP41056 107 aaKnown RBP2.63□□□□□ -1.99
SSL1YLR005W YGR017WP53210 297 aa2.63□□□□□ -1.99
SSL1YLR005W RAV2Q03956 351 aa2.63□□□□□ -1.99
SSL1YLR005W ANT1Q06497 328 aa2.63□□□□□ -1.99
SSL1YLR005W YBR200W-AQ3E755 54 aa2.63□□□□□ -1.99
SSL1YLR005W YBR298C-AQ8TGK4 73 aa2.63□□□□□ -1.99
SSL1YLR005W RPL12AP0CX53 165 aaKnown RBP2.62□□□□□ -1.99
SSL1YLR005W RPL12BP0CX54 165 aa2.62□□□□□ -1.99
SSL1YLR005W MAG1P22134 296 aaKnown RBP2.62□□□□□ -1.99
SSL1YLR005W KTI12P34253 313 aaKnown RBP2.62□□□□□ -1.99
SSL1YLR005W SHG1P38337 142 aa2.62□□□□□ -1.99
SSL1YLR005W YMR141CP40211 102 aa2.62□□□□□ -1.99
SSL1YLR005W MGA1P53050 456 aa2.62□□□□□ -1.99
SSL1YLR005W DAD4P69851 72 aa2.62□□□□□ -1.99
SSL1YLR005W SDO1Q07953 250 aaKnown RBP2.62□□□□□ -1.99
SSL1YLR005W DGA1Q08650 418 aa2.62□□□□□ -1.99
SSL1YLR005W PCC1Q3E833 88 aa2.62□□□□□ -1.99
SSL1YLR005W YCR007CP25354 239 aa2.61□□□□□ -1.99
SSL1YLR005W MIX23P38162 196 aa2.61□□□□□ -1.99
SSL1YLR005W SVP26P38869 228 aa2.61□□□□□ -1.99
SSL1YLR005W TEM1P38987 245 aa2.61□□□□□ -1.99
SSL1YLR005W SUR2P38992 349 aa2.61□□□□□ -1.99
SSL1YLR005W GCV3P39726 170 aaPredicted RBP2.61□□□□□ -1.99
SSL1YLR005W CYB5P40312 120 aa2.61□□□□□ -1.99
SSL1YLR005W LOC1P43586 204 aaPredicted RBP2.61□□□□□ -1.99
SSL1YLR005W ATP19P81451 68 aa2.61□□□□□ -1.99
SSL1YLR005W TIM22Q12328 207 aa2.61□□□□□ -1.99
SSL1YLR005W YMR122W-AQ3E842 84 aa2.61□□□□□ -1.99
SSL1YLR005W RPS22AP0C0W1 130 aaKnown RBP2.61□□□□□ -1.99
SSL1YLR005W SAR1P20606 190 aaKnown RBP2.61□□□□□ -1.99
SSL1YLR005W YCR023CP25351 611 aa2.61□□□□□ -1.99
SSL1YLR005W RPS0AP32905 252 aaKnown RBP2.61□□□□□ -1.99
SSL1YLR005W YGR026WP53217 278 aa2.61□□□□□ -1.99
SSL1YLR005W PAU4P53427 120 aa2.61□□□□□ -1.99
SSL1YLR005W EOS1P53938 366 aa2.61□□□□□ -1.99
SSL1YLR005W DIA1P54005 336 aa2.61□□□□□ -1.99
SSL1YLR005W PMP3P87284 55 aa2.61□□□□□ -1.99
SSL1YLR005W YOR105WQ08504 108 aa2.61□□□□□ -1.99
SSL1YLR005W YOR015WQ12169 119 aa2.61□□□□□ -1.99
SSL1YLR005W SPC25P40014 221 aa2.6□□□□□ -1.99
SSL1YLR005W TAD2P47058 250 aa2.6□□□□□ -1.99
SSL1YLR005W LCL1Q02786 101 aa2.6□□□□□ -1.99
SSL1YLR005W BET5Q03630 159 aa2.6□□□□□ -1.99
SSL1YLR005W YDR115WQ04598 105 aa2.6□□□□□ -1.99
Retrieved 100 of 5,963 RNA–protein pairs in 16.8 ms