RNA–Protein interactions for RNA: YKR092C

SRP40, Transcript of Nucleolar serine-rich protein, yeastyeast

Gene SRP40, Length 1,221 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRP40YKR092C POR1P04840 283 aaKnown RBP3.27□□□□□ -1.89
SRP40YKR092C RPL15AP05748 204 aaKnown RBP3.27□□□□□ -1.89
SRP40YKR092C HEM4P06174 275 aa3.27□□□□□ -1.89
SRP40YKR092C CKS1P20486 150 aaKnown RBP3.27□□□□□ -1.89
SRP40YKR092C YCR085WP25650 117 aa3.27□□□□□ -1.89
SRP40YKR092C FUN19P28003 413 aaPredicted RBP3.27□□□□□ -1.89
SRP40YKR092C AHT1P29589 182 aa3.27□□□□□ -1.89
SRP40YKR092C DSK2P48510 373 aa3.27□□□□□ -1.89
SRP40YKR092C PIR3Q03180 325 aa3.27□□□□□ -1.89
SRP40YKR092C NMA1Q06178 401 aaKnown RBP3.27□□□□□ -1.89
SRP40YKR092C IRC25Q07951 179 aa3.27□□□□□ -1.89
SRP40YKR092C YLR363W-AQ3E747 85 aa3.27□□□□□ -1.89
SRP40YKR092C ENV10Q99382 181 aa3.27□□□□□ -1.89
SRP40YKR092C UBR1P19812 1950 aa3.27□□□□□ -1.89
SRP40YKR092C Q0255P03881 472 aa3.26□□□□□ -1.89
SRP40YKR092C YOL162WP0CF19 215 aa3.26□□□□□ -1.89
SRP40YKR092C HSP12P22943 109 aaKnown RBP3.26□□□□□ -1.89
SRP40YKR092C YCR022CP25620 114 aa3.26□□□□□ -1.89
SRP40YKR092C YCR050CP25630 102 aa3.26□□□□□ -1.89
SRP40YKR092C SHE1P38200 338 aa3.26□□□□□ -1.89
SRP40YKR092C ECM34P38728 170 aa3.26□□□□□ -1.89
SRP40YKR092C RPR2P40571 144 aa3.26□□□□□ -1.89
SRP40YKR092C KNH1P50112 268 aa3.26□□□□□ -1.89
SRP40YKR092C GPI19Q04082 140 aa3.26□□□□□ -1.89
SRP40YKR092C HRT1Q08273 121 aa3.26□□□□□ -1.89
SRP40YKR092C AYT1Q12226 474 aa3.26□□□□□ -1.89
SRP40YKR092C DAD1Q12248 94 aa3.26□□□□□ -1.89
SRP40YKR092C YPR011CQ12251 326 aa3.26□□□□□ -1.89
SRP40YKR092C YMR230W-AQ3E7B5 62 aa3.26□□□□□ -1.89
SRP40YKR092C KSH1Q8TGJ3 72 aa3.26□□□□□ -1.89
SRP40YKR092C PAU19P0CE85 124 aa3.25□□□□□ -1.89
SRP40YKR092C PAU21P0CE86 164 aa3.25□□□□□ -1.89
SRP40YKR092C PAU22P0CE87 164 aa3.25□□□□□ -1.89
SRP40YKR092C KRE1P17260 313 aa3.25□□□□□ -1.89
SRP40YKR092C MRS4P23500 304 aa3.25□□□□□ -1.89
SRP40YKR092C PAU3P25610 124 aa3.25□□□□□ -1.89
SRP40YKR092C MRP17P28778 131 aa3.25□□□□□ -1.89
SRP40YKR092C PAM17P36147 197 aa3.25□□□□□ -1.89
SRP40YKR092C YBL081WP38180 368 aaKnown RBP3.25□□□□□ -1.89
SRP40YKR092C YHL018WP38744 120 aaPredicted RBP3.25□□□□□ -1.89
SRP40YKR092C GCV3P39726 170 aaPredicted RBP3.25□□□□□ -1.89
SRP40YKR092C YER134CP40081 178 aa3.25□□□□□ -1.89
SRP40YKR092C SKI6P46948 246 aaPredicted RBP3.25□□□□□ -1.89
SRP40YKR092C SPG1P50088 95 aa3.25□□□□□ -1.89
SRP40YKR092C SDS23P53172 527 aa3.25□□□□□ -1.89
SRP40YKR092C YGR050CP53231 118 aa3.25□□□□□ -1.89
SRP40YKR092C YNL046WP53956 172 aa3.25□□□□□ -1.89
SRP40YKR092C YMR252CQ04814 134 aa3.25□□□□□ -1.89
SRP40YKR092C ANT1Q06497 328 aa3.25□□□□□ -1.89
SRP40YKR092C JID1Q12350 301 aa3.25□□□□□ -1.89
SRP40YKR092C PCL9Q12477 304 aa3.25□□□□□ -1.89
SRP40YKR092C MSB2P32334 1306 aa3.24□□□□□ -1.89
SRP40YKR092C RPA12P32529 125 aaKnown RBP3.24□□□□□ -1.89
SRP40YKR092C MID2P36027 376 aa3.24□□□□□ -1.89
SRP40YKR092C HTD2P38790 280 aaKnown RBP3.24□□□□□ -1.89
SRP40YKR092C YEL073CP39974 107 aa3.24□□□□□ -1.89
SRP40YKR092C YNL198CP40166 100 aa3.24□□□□□ -1.89
SRP40YKR092C TOS2P50078 622 aa3.24□□□□□ -1.89
SRP40YKR092C ELP6Q04868 273 aa3.24□□□□□ -1.89
SRP40YKR092C GAT3Q07928 141 aa3.24□□□□□ -1.89
SRP40YKR092C YOL160WQ08321 113 aa3.24□□□□□ -1.89
SRP40YKR092C YOR186WQ08560 144 aa3.24□□□□□ -1.89
SRP40YKR092C YOR292CQ08743 309 aa3.24□□□□□ -1.89
SRP40YKR092C PPT2Q12036 173 aa3.24□□□□□ -1.89
SRP40YKR092C ATG41Q12048 136 aa3.24□□□□□ -1.89
SRP40YKR092C DFM1Q12743 341 aaKnown RBP3.24□□□□□ -1.89
SRP40YKR092C YIL102C-AQ2V2P5 75 aa3.24□□□□□ -1.89
SRP40YKR092C ATG40Q99325 256 aa3.24□□□□□ -1.89
SRP40YKR092C RPL40AP0CH08 128 aaKnown RBP3.23□□□□□ -1.89
SRP40YKR092C RPL40BP0CH09 128 aaKnown RBP3.23□□□□□ -1.89
SRP40YKR092C UBC4P15731 148 aa3.23□□□□□ -1.89
SRP40YKR092C NHP2P32495 156 aaPredicted RBP3.23□□□□□ -1.89
SRP40YKR092C TOM6P33448 61 aa3.23□□□□□ -1.89
SRP40YKR092C GPI18P38211 433 aa3.23□□□□□ -1.89
SRP40YKR092C CSH1P38287 376 aa3.23□□□□□ -1.89
SRP40YKR092C TVP23P38962 199 aa3.23□□□□□ -1.89
SRP40YKR092C ASP1P38986 381 aaPredicted RBP3.23□□□□□ -1.89
SRP40YKR092C NSA2P40078 261 aaKnown RBP3.23□□□□□ -1.89
SRP40YKR092C DFG10P40526 253 aa3.23□□□□□ -1.89
SRP40YKR092C GAT4P40569 121 aa3.23□□□□□ -1.89
SRP40YKR092C PAU12P53343 120 aa3.23□□□□□ -1.89
SRP40YKR092C RSM19P53733 91 aaPredicted RBP3.23□□□□□ -1.89
SRP40YKR092C SMP1P38128 452 aa3.22□□□□□ -1.89
SRP40YKR092C PAU24P38155 120 aa3.22□□□□□ -1.89
SRP40YKR092C SVP26P38869 228 aa3.22□□□□□ -1.89
SRP40YKR092C TIM17P39515 158 aa3.22□□□□□ -1.89
SRP40YKR092C TDA2P40045 126 aa3.22□□□□□ -1.89
SRP40YKR092C POP3P53833 195 aaPredicted RBP3.22□□□□□ -1.89
SRP40YKR092C EST3Q03096 181 aa3.22□□□□□ -1.89
SRP40YKR092C PIR1Q03178 341 aa3.22□□□□□ -1.89
SRP40YKR092C YDL157CQ12082 118 aa3.22□□□□□ -1.89
SRP40YKR092C EMC6Q12431 108 aa3.22□□□□□ -1.89
SRP40YKR092C AGA1P32323 725 aa3.21□□□□□ -1.9
SRP40YKR092C PAU2P32612 120 aa3.21□□□□□ -1.9
SRP40YKR092C PAU16P35994 123 aa3.21□□□□□ -1.9
SRP40YKR092C GGC1P38988 300 aa3.21□□□□□ -1.9
SRP40YKR092C YGL193CP53097 103 aa3.21□□□□□ -1.9
SRP40YKR092C SMD1Q02260 146 aaPredicted RBP3.21□□□□□ -1.9
SRP40YKR092C RRT7Q07829 113 aa3.21□□□□□ -1.9
SRP40YKR092C YDL211CQ12121 372 aa3.21□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 22.6 ms