RNA–Protein interactions for RNA: YKR072C

SIS2, Transcript of Negative regulatory subunit of protein phosphatase 1 (Ppz1p), yeast

Gene SIS2, Length 1,689 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SIS2	YKR072C	PAM17	P36147	197 aa		3.67	□□□□□ -1.82
SIS2	YKR072C	YPI1	P43587	155 aa		3.67	□□□□□ -1.82
SIS2	YKR072C	SAY1	P53324	424 aa		3.67	□□□□□ -1.82
SIS2	YKR072C	RAS2	P01120	322 aa	Known RBP	3.66	□□□□□ -1.82
SIS2	YKR072C	YGL041W-A	P0C5N3	154 aa		3.66	□□□□□ -1.82
SIS2	YKR072C	MDH2	P22133	377 aa		3.66	□□□□□ -1.82
SIS2	YKR072C	YBR090C	P38253	122 aa		3.66	□□□□□ -1.82
SIS2	YKR072C	ATG10	Q07879	167 aa		3.66	□□□□□ -1.82
SIS2	YKR072C	DDP1	Q99321	188 aa	Known RBP	3.66	□□□□□ -1.82
SIS2	YKR072C	YPR117W	Q06116	2489 aa		3.66	□□□□□ -1.82
SIS2	YKR072C	YLR419W	Q06698	1435 aa	Known RBP	3.66	□□□□□ -1.82
SIS2	YKR072C	YCR050C	P25630	102 aa		3.65	□□□□□ -1.82
SIS2	YKR072C	SDH4	P37298	181 aa		3.65	□□□□□ -1.82
SIS2	YKR072C	YNL217W	P40152	326 aa		3.65	□□□□□ -1.82
SIS2	YKR072C	YGL260W	P53056	76 aa		3.65	□□□□□ -1.82
SIS2	YKR072C	DOC1	P53068	250 aa		3.65	□□□□□ -1.82
SIS2	YKR072C	NHP10	Q03435	203 aa		3.65	□□□□□ -1.82
SIS2	YKR072C	RIM9	Q04734	239 aa		3.65	□□□□□ -1.82
SIS2	YKR072C	YMR230W-A	Q3E7B5	62 aa		3.65	□□□□□ -1.82
SIS2	YKR072C	FZF1	P32805	299 aa		3.65	□□□□□ -1.83
SIS2	YKR072C	YET1	P35723	206 aa		3.65	□□□□□ -1.83
SIS2	YKR072C	LSM8	P47093	109 aa	Known RBP	3.65	□□□□□ -1.83
SIS2	YKR072C	DIE2	P50076	525 aa		3.65	□□□□□ -1.83
SIS2	YKR072C	HAL1	Q01766	294 aa		3.65	□□□□□ -1.83
SIS2	YKR072C	UPS1	Q05776	175 aa		3.65	□□□□□ -1.83
SIS2	YKR072C	YPR063C	Q12160	140 aa		3.65	□□□□□ -1.83
SIS2	YKR072C	YOR097C	Q12274	175 aa	Predicted RBP	3.65	□□□□□ -1.83
SIS2	YKR072C	UBR1	P19812	1950 aa		3.64	□□□□□ -1.83
SIS2	YKR072C	GAA1	P39012	614 aa		3.64	□□□□□ -1.83
SIS2	YKR072C	YFL012W	P43580	148 aa		3.64	□□□□□ -1.83
SIS2	YKR072C	MPC1	P53157	130 aa	Known RBP	3.64	□□□□□ -1.83
SIS2	YKR072C	YOR381W-A	Q3E804	55 aa		3.64	□□□□□ -1.83
SIS2	YKR072C	HYP2	P23301	157 aa	Known RBP	3.63	□□□□□ -1.83
SIS2	YKR072C	TVP23	P38962	199 aa		3.63	□□□□□ -1.83
SIS2	YKR072C	YAR029W	P39549	74 aa		3.63	□□□□□ -1.83
SIS2	YKR072C	YEA6	P39953	335 aa		3.63	□□□□□ -1.83
SIS2	YKR072C	YIR035C	P40579	254 aa		3.63	□□□□□ -1.83
SIS2	YKR072C	GNA1	P43577	159 aa	Predicted RBP	3.63	□□□□□ -1.83
SIS2	YKR072C	ATP19	P81451	68 aa		3.63	□□□□□ -1.83
SIS2	YKR072C	CSI2	Q08054	341 aa		3.63	□□□□□ -1.83
SIS2	YKR072C	IRC23	Q08416	157 aa		3.63	□□□□□ -1.83
SIS2	YKR072C	UIP4	Q08926	304 aa		3.63	□□□□□ -1.83
SIS2	YKR072C	SCS22	Q6Q595	175 aa		3.63	□□□□□ -1.83
SIS2	YKR072C	VPS13	Q07878	3144 aa		3.62	□□□□□ -1.83
SIS2	YKR072C	YOL162W	P0CF19	215 aa		3.62	□□□□□ -1.83
SIS2	YKR072C	YHR180W	P38868	163 aa		3.62	□□□□□ -1.83
SIS2	YKR072C	FLX1	P40464	311 aa		3.62	□□□□□ -1.83
SIS2	YKR072C	YMR252C	Q04814	134 aa		3.62	□□□□□ -1.83
SIS2	YKR072C	TAO3	P40468	2376 aa		3.62	□□□□□ -1.83
SIS2	YKR072C	UBC5	P15732	148 aa		3.62	□□□□□ -1.83
SIS2	YKR072C	PAM16	P42949	149 aa		3.62	□□□□□ -1.83
SIS2	YKR072C	PIN3	Q06449	215 aa		3.62	□□□□□ -1.83
SIS2	YKR072C	TMA19	P35691	167 aa	Known RBP	3.61	□□□□□ -1.83
SIS2	YKR072C	NSE4	P43124	402 aa		3.61	□□□□□ -1.83
SIS2	YKR072C	THG1	P53215	237 aa	Known RBP	3.61	□□□□□ -1.83
SIS2	YKR072C	RCE1	Q03530	315 aa		3.61	□□□□□ -1.83
SIS2	YKR072C	FAS2	P19097	1887 aa	Known RBP	3.61	□□□□□ -1.83
SIS2	YKR072C	HSP26	P15992	214 aa	Known RBP RIP-Chip data	3.6	□□□□□ -1.83	not detected
SIS2	YKR072C	YAL064W	P39711	94 aa		3.6	□□□□□ -1.83
SIS2	YKR072C	BAT2	P47176	376 aa	Known RBP	3.6	□□□□□ -1.83
SIS2	YKR072C	YGR164W	P53291	111 aa		3.6	□□□□□ -1.83
SIS2	YKR072C	ATG40	Q99325	256 aa		3.6	□□□□□ -1.83
SIS2	YKR072C	FIG2	P25653	1609 aa		3.6	□□□□□ -1.83
SIS2	YKR072C	YCR099C	P25657	155 aa		3.59	□□□□□ -1.83
SIS2	YKR072C	SCM4	P32564	187 aa		3.59	□□□□□ -1.83
SIS2	YKR072C	CLB6	P32943	380 aa		3.59	□□□□□ -1.83
SIS2	YKR072C	RPL33B	P41056	107 aa	Known RBP	3.59	□□□□□ -1.83
SIS2	YKR072C	YNR077C	P53758	84 aa		3.59	□□□□□ -1.83
SIS2	YKR072C	RPS23A	P0CX29	145 aa	Known RBP	3.59	□□□□□ -1.84
SIS2	YKR072C	RPS23B	P0CX30	145 aa		3.59	□□□□□ -1.84
SIS2	YKR072C	PRE1	P22141	198 aa	Known RBP	3.59	□□□□□ -1.84
SIS2	YKR072C	PIR1	Q03178	341 aa		3.59	□□□□□ -1.84
SIS2	YKR072C	YOR015W	Q12169	119 aa		3.59	□□□□□ -1.84
SIS2	YKR072C	UTP10	P42945	1769 aa	Known RBP	3.58	□□□□□ -1.84
SIS2	YKR072C	YHL042W	P38729	150 aa		3.58	□□□□□ -1.84
SIS2	YKR072C	UPS3	Q04006	179 aa		3.58	□□□□□ -1.84
SIS2	YKR072C	KEI1	Q06346	221 aa		3.58	□□□□□ -1.84
SIS2	YKR072C	YCR075W-A	Q3E830	75 aa		3.58	□□□□□ -1.84
SIS2	YKR072C	HAP3	P13434	144 aa		3.57	□□□□□ -1.84
SIS2	YKR072C	YEL045C	P32616	141 aa		3.57	□□□□□ -1.84
SIS2	YKR072C	PIR5	P46999	287 aa		3.57	□□□□□ -1.84
SIS2	YKR072C	YMR103C	Q04436	120 aa		3.57	□□□□□ -1.84
SIS2	YKR072C	SCP1	Q08873	200 aa		3.57	□□□□□ -1.84
SIS2	YKR072C	YOR385W	Q08909	290 aa		3.57	□□□□□ -1.84
SIS2	YKR072C	YOR376W-A	Q3E805	51 aa		3.57	□□□□□ -1.84
SIS2	YKR072C	YLR422W	Q06409	1932 aa		3.57	□□□□□ -1.84
SIS2	YKR072C	TOR1	P35169	2470 aa		3.56	□□□□□ -1.84
SIS2	YKR072C	INO4	P13902	151 aa		3.56	□□□□□ -1.84
SIS2	YKR072C	PEX4	P29340	183 aa		3.56	□□□□□ -1.84
SIS2	YKR072C	SRL3	P36167	246 aa		3.56	□□□□□ -1.84
SIS2	YKR072C	ERV15	P38312	142 aa		3.56	□□□□□ -1.84
SIS2	YKR072C	YML079W	Q03629	201 aa		3.56	□□□□□ -1.84
SIS2	YKR072C	YHP1	Q04116	353 aa		3.56	□□□□□ -1.84
SIS2	YKR072C	FEX1	Q08913	375 aa		3.56	□□□□□ -1.84
SIS2	YKR072C	FEX2	Q08991	375 aa		3.56	□□□□□ -1.84
SIS2	YKR072C	GTT2	Q12390	233 aa		3.56	□□□□□ -1.84
SIS2	YKR072C	YLR236C	A0A023PZG4	107 aa		3.55	□□□□□ -1.84
SIS2	YKR072C	MIG1	P27705	504 aa		3.55	□□□□□ -1.84
SIS2	YKR072C	TIR3	P40552	269 aa		3.55	□□□□□ -1.84
SIS2	YKR072C	YPR013C	Q12145	317 aa		3.55	□□□□□ -1.84

Retrieved 100 of 5,963 RNA–protein pairs in 14.3 ms