RNA–Protein interactions for RNA: YKR056W

TRM2, Transcript of tRNA methyltransferase, yeastyeast

Gene TRM2, Length 1,920 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRM2YKR056W YEL014CP39999 101 aa1.58□□□□□ -2.16
TRM2YKR056W TAR1Q8TGM6 124 aa1.58□□□□□ -2.16
TRM2YKR056W SNF11P38956 169 aa1.58□□□□□ -2.16
TRM2YKR056W PEP8P40335 379 aa1.58□□□□□ -2.16
TRM2YKR056W RPS12P48589 143 aaKnown RBP1.58□□□□□ -2.16
TRM2YKR056W FYV7Q12247 151 aa1.58□□□□□ -2.16
TRM2YKR056W YOR097CQ12274 175 aaPredicted RBP1.58□□□□□ -2.16
TRM2YKR056W KTI11Q3E840 82 aa1.58□□□□□ -2.16
TRM2YKR056W MYO2P19524 1574 aaKnown RBP1.57□□□□□ -2.16
TRM2YKR056W VAR1P02381 398 aa1.57□□□□□ -2.16
TRM2YKR056W HAP2P06774 265 aa1.57□□□□□ -2.16
TRM2YKR056W UTP11P34247 250 aaPredicted RBP1.57□□□□□ -2.16
TRM2YKR056W DCV1P43595 202 aa1.57□□□□□ -2.16
TRM2YKR056W YGL230CP53074 147 aa1.57□□□□□ -2.16
TRM2YKR056W YPR153WQ06537 140 aa1.57□□□□□ -2.16
TRM2YKR056W RAF1Q06891 181 aa1.57□□□□□ -2.16
TRM2YKR056W GTT2Q12390 233 aa1.57□□□□□ -2.16
TRM2YKR056W OCA6Q12454 224 aa1.57□□□□□ -2.16
TRM2YKR056W YGL041W-AP0C5N3 154 aa1.56□□□□□ -2.16
TRM2YKR056W YFL051CP43552 160 aa1.56□□□□□ -2.16
TRM2YKR056W YFR035CP43608 114 aa1.56□□□□□ -2.16
TRM2YKR056W YGL149WP53116 101 aa1.56□□□□□ -2.16
TRM2YKR056W SPP41P38904 1435 aa1.56□□□□□ -2.16
TRM2YKR056W RTC6O14464 93 aa1.56□□□□□ -2.16
TRM2YKR056W FUN14P18411 198 aa1.56□□□□□ -2.16
TRM2YKR056W HYR1P40581 163 aaKnown RBP1.56□□□□□ -2.16
TRM2YKR056W YAE1P47118 141 aaPredicted RBP1.56□□□□□ -2.16
TRM2YKR056W GPI11Q06636 219 aa1.56□□□□□ -2.16
TRM2YKR056W YPL225WQ08971 146 aaKnown RBP1.56□□□□□ -2.16
TRM2YKR056W ACC1Q00955 2233 aaKnown RBP1.56□□□□□ -2.16
TRM2YKR056W RPL40AP0CH08 128 aaKnown RBP1.55□□□□□ -2.16
TRM2YKR056W RPL40BP0CH09 128 aaKnown RBP1.55□□□□□ -2.16
TRM2YKR056W SEC59P20048 519 aa1.55□□□□□ -2.16
TRM2YKR056W ERV14P53173 138 aa1.55□□□□□ -2.16
TRM2YKR056W BRP1P53194 125 aa1.55□□□□□ -2.16
TRM2YKR056W RCE1Q03530 315 aa1.55□□□□□ -2.16
TRM2YKR056W GPI19Q04082 140 aa1.55□□□□□ -2.16
TRM2YKR056W PAU21P0CE86 164 aa1.54□□□□□ -2.16
TRM2YKR056W PAU22P0CE87 164 aa1.54□□□□□ -2.16
TRM2YKR056W YHR130CP38834 111 aa1.54□□□□□ -2.16
TRM2YKR056W PAU12P53343 120 aa1.54□□□□□ -2.16
TRM2YKR056W MET31Q03081 177 aa1.54□□□□□ -2.16
TRM2YKR056W NAT5Q08689 176 aa1.54□□□□□ -2.16
TRM2YKR056W BUD4P47136 1447 aa1.54□□□□□ -2.16
TRM2YKR056W MRPL44P19956 98 aa1.54□□□□□ -2.16
TRM2YKR056W EMP24P32803 203 aaKnown RBP1.54□□□□□ -2.16
TRM2YKR056W HSP10P38910 106 aa1.54□□□□□ -2.16
TRM2YKR056W YPL067CQ02754 198 aa1.54□□□□□ -2.16
TRM2YKR056W CWC27Q02770 301 aa1.54□□□□□ -2.16
TRM2YKR056W RTR2Q12378 196 aa1.54□□□□□ -2.16
TRM2YKR056W YCR099CP25657 155 aa1.53□□□□□ -2.16
TRM2YKR056W TDA2P40045 126 aa1.53□□□□□ -2.16
TRM2YKR056W YOR289WQ12012 251 aaPredicted RBP1.53□□□□□ -2.16
TRM2YKR056W RPL13AQ12690 199 aaPredicted RBP1.53□□□□□ -2.16
TRM2YKR056W MED11Q99278 115 aa1.53□□□□□ -2.16
TRM2YKR056W TOP2P06786 1428 aaKnown RBP1.53□□□□□ -2.16
TRM2YKR056W BUD23P25627 275 aaPredicted RBP1.52□□□□□ -2.17
TRM2YKR056W ATG8P38182 117 aaRIP-Chip data1.52□□□□□ -2.17not detected
TRM2YKR056W YIL014C-AQ02598 104 aa1.52□□□□□ -2.17
TRM2YKR056W COA3Q3E7B2 85 aa1.52□□□□□ -2.17
TRM2YKR056W TSC11P40061 1430 aa1.52□□□□□ -2.17
TRM2YKR056W QCR8P08525 94 aa1.52□□□□□ -2.17
TRM2YKR056W YFL065CP43539 102 aa1.52□□□□□ -2.17
TRM2YKR056W MPC1P53157 130 aaKnown RBP1.52□□□□□ -2.17
TRM2YKR056W YMR103CQ04436 120 aa1.52□□□□□ -2.17
TRM2YKR056W YNL146C-AQ3E7Z1 64 aa1.52□□□□□ -2.17
TRM2YKR056W MHF1Q3E835 90 aa1.52□□□□□ -2.17
TRM2YKR056W MDS3P53094 1487 aa1.51□□□□□ -2.17
TRM2YKR056W YCL042WP25572 119 aa1.51□□□□□ -2.17
TRM2YKR056W YBR242WP38331 238 aa1.51□□□□□ -2.17
TRM2YKR056W PAU2P32612 120 aa1.5□□□□□ -2.17
TRM2YKR056W ECM31P38122 312 aa1.5□□□□□ -2.17
TRM2YKR056W YBR027CP38220 110 aa1.5□□□□□ -2.17
TRM2YKR056W AIM18P38884 321 aa1.5□□□□□ -2.17
TRM2YKR056W YEA6P39953 335 aa1.5□□□□□ -2.17
TRM2YKR056W RPL13BP40212 199 aaKnown RBP1.5□□□□□ -2.17
TRM2YKR056W ZEO1Q08245 113 aa1.5□□□□□ -2.17
TRM2YKR056W YLR365WQ7LIF2 110 aa1.5□□□□□ -2.17
TRM2YKR056W HAP3P13434 144 aa1.5□□□□□ -2.17
TRM2YKR056W UBC5P15732 148 aa1.5□□□□□ -2.17
TRM2YKR056W PAU24P38155 120 aa1.5□□□□□ -2.17
TRM2YKR056W GNA1P43577 159 aaPredicted RBP1.5□□□□□ -2.17
TRM2YKR056W GSC2P40989 1895 aa1.5□□□□□ -2.17
TRM2YKR056W YGL014C-AP0C5N1 53 aa1.49□□□□□ -2.17
TRM2YKR056W AQY2P0CD90 149 aa1.49□□□□□ -2.17
TRM2YKR056W PRE1P22141 198 aaKnown RBP1.49□□□□□ -2.17
TRM2YKR056W YGL010WP25338 174 aa1.49□□□□□ -2.17
TRM2YKR056W YBR090CP38253 122 aa1.49□□□□□ -2.17
TRM2YKR056W YLR194CQ05777 254 aa1.49□□□□□ -2.17
TRM2YKR056W TY1B-HO13535 1793 aa1.48□□□□□ -2.17
TRM2YKR056W MRPL11P36521 249 aaPredicted RBP1.48□□□□□ -2.17
TRM2YKR056W AIM4P38305 123 aaPredicted RBP1.48□□□□□ -2.17
TRM2YKR056W MIC10Q96VH5 97 aa1.48□□□□□ -2.17
TRM2YKR056W SEN15Q04675 128 aa1.48□□□□□ -2.17
TRM2YKR056W YLR296WQ05898 108 aa1.48□□□□□ -2.17
TRM2YKR056W VAM10Q08474 114 aa1.48□□□□□ -2.17
TRM2YKR056W YPL261CQ08976 102 aa1.48□□□□□ -2.17
TRM2YKR056W YPR203WQ08994 102 aa1.48□□□□□ -2.17
TRM2YKR056W YCL001W-BQ96VH2 84 aa1.48□□□□□ -2.17
TRM2YKR056W KRE5P22023 1365 aa1.47□□□□□ -2.17
Retrieved 100 of 5,963 RNA–protein pairs in 15.9 ms