RNA–Protein interactions for RNA: YKL062W

MSN4, Transcript of Stress-responsive transcriptional activator, yeastyeast

Gene MSN4, Length 1,893 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSN4YKL062W PDR10P51533 1564 aa2.91□□□□□ -1.94
MSN4YKL062W YEL067CP39978 195 aa2.91□□□□□ -1.94
MSN4YKL062W YJL027CP47063 138 aaPredicted RBP2.91□□□□□ -1.94
MSN4YKL062W ATP19P81451 68 aa2.91□□□□□ -1.94
MSN4YKL062W UPS3Q04006 179 aa2.91□□□□□ -1.94
MSN4YKL062W HRT1Q08273 121 aa2.91□□□□□ -1.94
MSN4YKL062W FYV5P25585 152 aa2.9□□□□□ -1.94
MSN4YKL062W ERV14P53173 138 aa2.9□□□□□ -1.94
MSN4YKL062W GPI19Q04082 140 aa2.9□□□□□ -1.94
MSN4YKL062W YMR082CQ04276 118 aa2.9□□□□□ -1.94
MSN4YKL062W SEN15Q04675 128 aa2.9□□□□□ -1.94
MSN4YKL062W GPI11Q06636 219 aa2.9□□□□□ -1.94
MSN4YKL062W ATG41Q12048 136 aa2.9□□□□□ -1.94
MSN4YKL062W SRB6P32570 121 aa2.9□□□□□ -1.95
MSN4YKL062W PIR1Q03178 341 aa2.9□□□□□ -1.95
MSN4YKL062W RAF1Q06891 181 aa2.89□□□□□ -1.95
MSN4YKL062W YPR013CQ12145 317 aa2.89□□□□□ -1.95
MSN4YKL062W TIR3P40552 269 aa2.88□□□□□ -1.95
MSN4YKL062W YOS1Q3E834 85 aa2.88□□□□□ -1.95
MSN4YKL062W ATG40Q99325 256 aa2.88□□□□□ -1.95
MSN4YKL062W TY3B-IQ7LHG5 1498 aaKnown RBP2.88□□□□□ -1.95
MSN4YKL062W RPS23AP0CX29 145 aaKnown RBP2.88□□□□□ -1.95
MSN4YKL062W RPS23BP0CX30 145 aa2.88□□□□□ -1.95
MSN4YKL062W MSL1P40567 111 aaPredicted RBP2.88□□□□□ -1.95
MSN4YKL062W COA6Q3E846 104 aa2.88□□□□□ -1.95
MSN4YKL062W MSB2P32334 1306 aa2.87□□□□□ -1.95
MSN4YKL062W YLR236CA0A023PZG4 107 aa2.87□□□□□ -1.95
MSN4YKL062W RPS19AP07280 144 aaKnown RBP2.87□□□□□ -1.95
MSN4YKL062W RPS19BP07281 144 aaPredicted RBP2.87□□□□□ -1.95
MSN4YKL062W UTH1P36135 365 aa2.87□□□□□ -1.95
MSN4YKL062W MRPL11P36521 249 aaPredicted RBP2.87□□□□□ -1.95
MSN4YKL062W PEP8P40335 379 aa2.87□□□□□ -1.95
MSN4YKL062W EMC5P40540 141 aa2.87□□□□□ -1.95
MSN4YKL062W RPL33BP41056 107 aaKnown RBP2.87□□□□□ -1.95
MSN4YKL062W BOL2P53082 120 aa2.87□□□□□ -1.95
MSN4YKL062W GRX5Q02784 150 aa2.87□□□□□ -1.95
MSN4YKL062W SEC7P11075 2009 aaKnown RBP2.86□□□□□ -1.95
MSN4YKL062W SOD1P00445 154 aaKnown RBP2.86□□□□□ -1.95
MSN4YKL062W YPL067CQ02754 198 aa2.86□□□□□ -1.95
MSN4YKL062W YML079WQ03629 201 aa2.86□□□□□ -1.95
MSN4YKL062W RRT15Q3E811 62 aa2.86□□□□□ -1.95
MSN4YKL062W FAS1P07149 2051 aaKnown RBP2.86□□□□□ -1.95
MSN4YKL062W ECM12O13529 151 aa2.86□□□□□ -1.95
MSN4YKL062W HPA3P39979 161 aa2.86□□□□□ -1.95
MSN4YKL062W PAU12P53343 120 aa2.86□□□□□ -1.95
MSN4YKL062W NMA1Q06178 401 aaKnown RBP2.86□□□□□ -1.95
MSN4YKL062W YPR195CQ06594 109 aa2.86□□□□□ -1.95
MSN4YKL062W RPO31P04051 1460 aa2.85□□□□□ -1.95
MSN4YKL062W MDM35O60200 86 aa2.85□□□□□ -1.95
MSN4YKL062W RPL40AP0CH08 128 aaKnown RBP2.85□□□□□ -1.95
MSN4YKL062W RPL40BP0CH09 128 aaKnown RBP2.85□□□□□ -1.95
MSN4YKL062W MRPL44P19956 98 aa2.85□□□□□ -1.95
MSN4YKL062W FMT1P32785 401 aa2.85□□□□□ -1.95
MSN4YKL062W YER187WP40102 141 aa2.85□□□□□ -1.95
MSN4YKL062W YGR269WP40326 108 aa2.85□□□□□ -1.95
MSN4YKL062W ELP6Q04868 273 aa2.85□□□□□ -1.95
MSN4YKL062W TY1B-BRQ12193 1756 aa2.85□□□□□ -1.95
MSN4YKL062W PAU21P0CE86 164 aa2.84□□□□□ -1.95
MSN4YKL062W PAU22P0CE87 164 aa2.84□□□□□ -1.95
MSN4YKL062W HUR1P45820 110 aa2.84□□□□□ -1.95
MSN4YKL062W IGO1P53897 168 aa2.84□□□□□ -1.95
MSN4YKL062W YLR296WQ05898 108 aa2.84□□□□□ -1.95
MSN4YKL062W PAU2P32612 120 aa2.84□□□□□ -1.96
MSN4YKL062W COA4Q05809 96 aa2.84□□□□□ -1.96
MSN4YKL062W HSP26P15992 214 aaKnown RBP RIP-Chip data2.83□□□□□ -1.96not detected
MSN4YKL062W HSP10P38910 106 aa2.83□□□□□ -1.96
MSN4YKL062W YER084WP40057 128 aa2.83□□□□□ -1.96
MSN4YKL062W DCV1P43595 202 aa2.83□□□□□ -1.96
MSN4YKL062W RSM19P53733 91 aaPredicted RBP2.83□□□□□ -1.96
MSN4YKL062W MIX14Q04341 121 aa2.83□□□□□ -1.96
MSN4YKL062W YPL261CQ08976 102 aa2.83□□□□□ -1.96
MSN4YKL062W BRP1P53194 125 aa2.82□□□□□ -1.96
MSN4YKL062W YHL018WP38744 120 aaPredicted RBP2.82□□□□□ -1.96
MSN4YKL062W CWP2P43497 92 aa2.82□□□□□ -1.96
MSN4YKL062W CIS3P47001 227 aa2.82□□□□□ -1.96
MSN4YKL062W YGL149WP53116 101 aa2.82□□□□□ -1.96
MSN4YKL062W CUE4Q04201 117 aaPredicted RBP2.82□□□□□ -1.96
MSN4YKL062W YPR153WQ06537 140 aa2.82□□□□□ -1.96
MSN4YKL062W COX8P04039 78 aa2.81□□□□□ -1.96
MSN4YKL062W YKR045CP36138 183 aa2.81□□□□□ -1.96
MSN4YKL062W PAU24P38155 120 aa2.81□□□□□ -1.96
MSN4YKL062W CYB5P40312 120 aa2.81□□□□□ -1.96
MSN4YKL062W YFL051CP43552 160 aa2.81□□□□□ -1.96
MSN4YKL062W DAD4P69851 72 aa2.81□□□□□ -1.96
MSN4YKL062W NAT5Q08689 176 aa2.81□□□□□ -1.96
MSN4YKL062W DAD1Q12248 94 aa2.81□□□□□ -1.96
MSN4YKL062W CMC4Q3E7A9 73 aa2.81□□□□□ -1.96
MSN4YKL062W TY1B-DR1Q03855 1755 aa2.8□□□□□ -1.96
MSN4YKL062W TY1B-DR3Q99231 1755 aa2.8□□□□□ -1.96
MSN4YKL062W SEC11P15367 167 aa2.8□□□□□ -1.96
MSN4YKL062W FUN14P18411 198 aa2.8□□□□□ -1.96
MSN4YKL062W UTR5P32630 166 aa2.8□□□□□ -1.96
MSN4YKL062W YBR209WP38311 105 aa2.8□□□□□ -1.96
MSN4YKL062W YFL012WP43580 148 aa2.8□□□□□ -1.96
MSN4YKL062W LSM2P38203 95 aaKnown RBP2.79□□□□□ -1.96
MSN4YKL062W YDR042CQ03205 200 aa2.79□□□□□ -1.96
MSN4YKL062W FIT2Q08906 153 aa2.79□□□□□ -1.96
MSN4YKL062W YDL157CQ12082 118 aa2.79□□□□□ -1.96
MSN4YKL062W VMA21P41806 77 aa2.79□□□□□ -1.96
MSN4YKL062W YIL014C-AQ02598 104 aa2.79□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms