RNA–Protein interactions for RNA: YKL018W

SWD2, Transcript of Subunit of the COMPASS (Set1C) histone H3K4 methyltransferase complex, yeastyeast

Gene SWD2, Length 990 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWD2YKL018W YMR103CQ04436 120 aa2.37□□□□□ -2.03
SWD2YKL018W YMR252CQ04814 134 aa2.37□□□□□ -2.03
SWD2YKL018W KEI1Q06346 221 aa2.37□□□□□ -2.03
SWD2YKL018W YOL014WQ08110 124 aa2.37□□□□□ -2.03
SWD2YKL018W UIP4Q08926 304 aa2.37□□□□□ -2.03
SWD2YKL018W YOR097CQ12274 175 aaPredicted RBP2.37□□□□□ -2.03
SWD2YKL018W YML100W-AQ8TGT0 57 aa2.37□□□□□ -2.03
SWD2YKL018W TY3B-IQ7LHG5 1498 aaKnown RBP2.37□□□□□ -2.03
SWD2YKL018W YRF1-2P40105 1681 aa2.37□□□□□ -2.03
SWD2YKL018W YHR032W-AP0C5N6 59 aa2.36□□□□□ -2.03
SWD2YKL018W RPB3P16370 318 aaKnown RBP2.36□□□□□ -2.03
SWD2YKL018W HSP12P22943 109 aaKnown RBP2.36□□□□□ -2.03
SWD2YKL018W HTD2P38790 280 aaKnown RBP2.36□□□□□ -2.03
SWD2YKL018W CUP9P41817 306 aa2.36□□□□□ -2.03
SWD2YKL018W ROM2P51862 1356 aaKnown RBP2.36□□□□□ -2.03
SWD2YKL018W CPA1P07258 411 aaKnown RBP2.35□□□□□ -2.03
SWD2YKL018W BET1P22804 142 aa2.35□□□□□ -2.03
SWD2YKL018W MIG1P27705 504 aa2.35□□□□□ -2.03
SWD2YKL018W EMP24P32803 203 aaKnown RBP2.35□□□□□ -2.03
SWD2YKL018W VMA11P32842 164 aa2.35□□□□□ -2.03
SWD2YKL018W YNL200CP40165 246 aaKnown RBP2.35□□□□□ -2.03
SWD2YKL018W PAM16P42949 149 aa2.35□□□□□ -2.03
SWD2YKL018W YGR026WP53217 278 aa2.35□□□□□ -2.03
SWD2YKL018W YPL067CQ02754 198 aa2.35□□□□□ -2.03
SWD2YKL018W YPR174CQ06616 221 aaPredicted RBP2.35□□□□□ -2.03
SWD2YKL018W ATG10Q07879 167 aa2.35□□□□□ -2.03
SWD2YKL018W YPR096CO13587 100 aa2.34□□□□□ -2.03
SWD2YKL018W RAD6P06104 172 aa2.34□□□□□ -2.03
SWD2YKL018W YLR156WP0CE96 114 aa2.34□□□□□ -2.03
SWD2YKL018W YLR159WP0CE97 114 aa2.34□□□□□ -2.03
SWD2YKL018W YLR161WP0CE98 114 aa2.34□□□□□ -2.03
SWD2YKL018W PAM17P36147 197 aa2.34□□□□□ -2.03
SWD2YKL018W FYV4P38783 130 aaPredicted RBP2.34□□□□□ -2.03
SWD2YKL018W IPT1P38954 527 aa2.34□□□□□ -2.03
SWD2YKL018W CCS1P40202 249 aaKnown RBP2.34□□□□□ -2.03
SWD2YKL018W RPL13BP40212 199 aaKnown RBP2.34□□□□□ -2.03
SWD2YKL018W ANT1Q06497 328 aa2.34□□□□□ -2.03
SWD2YKL018W ATO3Q12359 275 aa2.34□□□□□ -2.03
SWD2YKL018W RPL13AQ12690 199 aaPredicted RBP2.34□□□□□ -2.03
SWD2YKL018W YOR376W-AQ3E805 51 aa2.34□□□□□ -2.03
SWD2YKL018W MSW1P04803 379 aa2.33□□□□□ -2.04
SWD2YKL018W RPL9AP05738 191 aaKnown RBP2.33□□□□□ -2.04
SWD2YKL018W URA5P13298 226 aaKnown RBP2.33□□□□□ -2.04
SWD2YKL018W ATP15P21306 62 aa2.33□□□□□ -2.04
SWD2YKL018W TMA19P35691 167 aaKnown RBP2.33□□□□□ -2.04
SWD2YKL018W SPO73P40031 143 aa2.33□□□□□ -2.04
SWD2YKL018W VTC1P40046 129 aaRIP-Chip data2.33□□□□□ -2.04not detected
SWD2YKL018W RPL9BP51401 191 aaKnown RBP2.33□□□□□ -2.04
SWD2YKL018W IGO1P53897 168 aa2.33□□□□□ -2.04
SWD2YKL018W YMR090WQ04304 227 aaKnown RBP2.33□□□□□ -2.04
SWD2YKL018W SPG3Q04398 127 aaPredicted RBP2.33□□□□□ -2.04
SWD2YKL018W FIT1Q04433 528 aa2.33□□□□□ -2.04
SWD2YKL018W SHH3Q04487 196 aa2.33□□□□□ -2.04
SWD2YKL018W GPI11Q06636 219 aa2.33□□□□□ -2.04
SWD2YKL018W SWC7Q06707 132 aa2.33□□□□□ -2.04
SWD2YKL018W MED11Q99278 115 aa2.33□□□□□ -2.04
SWD2YKL018W DUR1,2P32528 1835 aaKnown RBP2.33□□□□□ -2.04
SWD2YKL018W FAS2P19097 1887 aaKnown RBP2.33□□□□□ -2.04
SWD2YKL018W HMRA1P0CY11 126 aa2.32□□□□□ -2.04
SWD2YKL018W DDR48P18899 430 aaKnown RBP2.32□□□□□ -2.04
SWD2YKL018W YCR050CP25630 102 aa2.32□□□□□ -2.04
SWD2YKL018W YCR099CP25657 155 aa2.32□□□□□ -2.04
SWD2YKL018W CLB6P32943 380 aa2.32□□□□□ -2.04
SWD2YKL018W NSA2P40078 261 aaKnown RBP2.32□□□□□ -2.04
SWD2YKL018W YER134CP40081 178 aa2.32□□□□□ -2.04
SWD2YKL018W DSK2P48510 373 aa2.32□□□□□ -2.04
SWD2YKL018W GAL83Q04739 417 aa2.32□□□□□ -2.04
SWD2YKL018W SYM1Q06563 197 aa2.32□□□□□ -2.04
SWD2YKL018W FYV12Q08559 129 aa2.32□□□□□ -2.04
SWD2YKL018W YDR029WQ12111 104 aa2.32□□□□□ -2.04
SWD2YKL018W FKS1P38631 1876 aaKnown RBP2.32□□□□□ -2.04
SWD2YKL018W YAR023CD6VPM8 179 aa2.31□□□□□ -2.04
SWD2YKL018W COX5BP00425 151 aa2.31□□□□□ -2.04
SWD2YKL018W HPA3P39979 161 aa2.31□□□□□ -2.04
SWD2YKL018W YEL028WP39989 153 aa2.31□□□□□ -2.04
SWD2YKL018W TIR3P40552 269 aa2.31□□□□□ -2.04
SWD2YKL018W YJL144WP47009 104 aa2.31□□□□□ -2.04
SWD2YKL018W SPG1P50088 95 aa2.31□□□□□ -2.04
SWD2YKL018W YMR082CQ04276 118 aa2.31□□□□□ -2.04
SWD2YKL018W RDS3Q06835 107 aaPredicted RBP2.31□□□□□ -2.04
SWD2YKL018W FIT3Q08907 204 aa2.31□□□□□ -2.04
SWD2YKL018W KSH1Q8TGJ3 72 aa2.31□□□□□ -2.04
SWD2YKL018W YHR213W-AQ8TGT4 77 aa2.31□□□□□ -2.04
SWD2YKL018W STF2P16965 84 aa2.3□□□□□ -2.04
SWD2YKL018W YBR013CP38215 129 aa2.3□□□□□ -2.04
SWD2YKL018W CTR2P38865 189 aa2.3□□□□□ -2.04
SWD2YKL018W YER135CP40082 130 aa2.3□□□□□ -2.04
SWD2YKL018W SMD3P43321 101 aaKnown RBP2.3□□□□□ -2.04
SWD2YKL018W YFR035CP43608 114 aa2.3□□□□□ -2.04
SWD2YKL018W YNR064CP53750 290 aa2.3□□□□□ -2.04
SWD2YKL018W YDR102CQ03864 110 aa2.3□□□□□ -2.04
SWD2YKL018W RAS2P01120 322 aaKnown RBP2.29□□□□□ -2.04
SWD2YKL018W RPL26AP05743 127 aaKnown RBP2.29□□□□□ -2.04
SWD2YKL018W UBC4P15731 148 aa2.29□□□□□ -2.04
SWD2YKL018W YGL010WP25338 174 aa2.29□□□□□ -2.04
SWD2YKL018W YAL064WP39711 94 aa2.29□□□□□ -2.04
SWD2YKL018W ERG25P53045 309 aa2.29□□□□□ -2.04
SWD2YKL018W RPL26BP53221 127 aaKnown RBP2.29□□□□□ -2.04
SWD2YKL018W SEN15Q04675 128 aa2.29□□□□□ -2.04
SWD2YKL018W RRT7Q07829 113 aa2.29□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 59.4 ms