RNA–Protein interactions for RNA: YIL076W

SEC28, Transcript of Epsilon-COP subunit of the coatomer, yeastyeast

Gene SEC28, Length 891 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC28YIL076W YOS1Q3E834 85 aa1.06□□□□□ -2.24
SEC28YIL076W YLR365WQ7LIF2 110 aa1.06□□□□□ -2.24
SEC28YIL076W TAR1Q8TGM6 124 aa1.06□□□□□ -2.24
SEC28YIL076W ATG40Q99325 256 aa1.06□□□□□ -2.24
SEC28YIL076W YMR31P19955 123 aa1.05□□□□□ -2.24
SEC28YIL076W IDP1P21954 428 aaKnown RBP1.05□□□□□ -2.24
SEC28YIL076W ROX3P25046 220 aa1.05□□□□□ -2.24
SEC28YIL076W AHC2P25649 128 aa1.05□□□□□ -2.24
SEC28YIL076W RFA3P26755 122 aaKnown RBP1.05□□□□□ -2.24
SEC28YIL076W SRY1P36007 326 aa1.05□□□□□ -2.24
SEC28YIL076W SRL3P36167 246 aa1.05□□□□□ -2.24
SEC28YIL076W IKI1P38874 309 aa1.05□□□□□ -2.24
SEC28YIL076W EGD2P38879 174 aaKnown RBP1.05□□□□□ -2.24
SEC28YIL076W NVJ1P38881 321 aa1.05□□□□□ -2.24
SEC28YIL076W COX15P40086 486 aa1.05□□□□□ -2.24
SEC28YIL076W HUA1P40325 198 aa1.05□□□□□ -2.24
SEC28YIL076W RFC2P40348 353 aa1.05□□□□□ -2.24
SEC28YIL076W FMC1P40491 155 aa1.05□□□□□ -2.24
SEC28YIL076W GNA1P43577 159 aaPredicted RBP1.05□□□□□ -2.24
SEC28YIL076W GPI14P47088 403 aaKnown RBP1.05□□□□□ -2.24
SEC28YIL076W YAE1P47118 141 aaPredicted RBP1.05□□□□□ -2.24
SEC28YIL076W BXI1P48558 297 aa1.05□□□□□ -2.24
SEC28YIL076W SOL1P50278 321 aa1.05□□□□□ -2.24
SEC28YIL076W SRL4Q03085 281 aa1.05□□□□□ -2.24
SEC28YIL076W TLG1Q03322 224 aa1.05□□□□□ -2.24
SEC28YIL076W YML108WQ03759 105 aa1.05□□□□□ -2.24
SEC28YIL076W LSO2Q3E772 92 aaKnown RBP1.05□□□□□ -2.24
SEC28YIL076W YLR099W-AQ3E798 87 aa1.05□□□□□ -2.24
SEC28YIL076W PET54P10834 293 aa1.04□□□□□ -2.24
SEC28YIL076W SEN2P16658 377 aa1.04□□□□□ -2.24
SEC28YIL076W GAT4P40569 121 aa1.04□□□□□ -2.24
SEC28YIL076W YJL218WP40892 196 aaKnown RBP1.04□□□□□ -2.24
SEC28YIL076W RPL37BP51402 88 aaKnown RBP1.04□□□□□ -2.24
SEC28YIL076W HNT1Q04344 158 aaKnown RBP1.04□□□□□ -2.24
SEC28YIL076W KEI1Q06346 221 aa1.04□□□□□ -2.24
SEC28YIL076W IRC23Q08416 157 aa1.04□□□□□ -2.24
SEC28YIL076W ATG41Q12048 136 aa1.04□□□□□ -2.24
SEC28YIL076W HUG1Q6Q5K6 68 aa1.04□□□□□ -2.24
SEC28YIL076W ODC2Q99297 307 aa1.04□□□□□ -2.24
SEC28YIL076W HTB1P02293 131 aaKnown RBP1.03□□□□□ -2.24
SEC28YIL076W URA6P15700 204 aa1.03□□□□□ -2.24
SEC28YIL076W HYM1P32464 399 aa1.03□□□□□ -2.24
SEC28YIL076W MRPL38P35996 138 aaPredicted RBP1.03□□□□□ -2.24
SEC28YIL076W YER137CP40083 148 aaKnown RBP1.03□□□□□ -2.24
SEC28YIL076W LST8P41318 303 aa1.03□□□□□ -2.24
SEC28YIL076W OTU1P43558 301 aa1.03□□□□□ -2.24
SEC28YIL076W ARP3P47117 449 aaKnown RBP1.03□□□□□ -2.24
SEC28YIL076W MIC26P50087 233 aa1.03□□□□□ -2.24
SEC28YIL076W KNH1P50112 268 aa1.03□□□□□ -2.24
SEC28YIL076W COX12Q01519 83 aa1.03□□□□□ -2.24
SEC28YIL076W SYM1Q06563 197 aa1.03□□□□□ -2.24
SEC28YIL076W HRD1Q08109 551 aa1.03□□□□□ -2.24
SEC28YIL076W MED11Q99278 115 aa1.03□□□□□ -2.24
SEC28YIL076W TRR1P29509 319 aaKnown RBP1.02□□□□□ -2.25
SEC28YIL076W YBL010CP32788 280 aa1.02□□□□□ -2.25
SEC28YIL076W SHE2P36068 246 aaKnown RBP RIP-Chip data1.02□□□□□ -2.25not detected
SEC28YIL076W MRPL28P36527 147 aa1.02□□□□□ -2.25
SEC28YIL076W CSH1P38287 376 aa1.02□□□□□ -2.25
SEC28YIL076W YPT31P38555 223 aaKnown RBP1.02□□□□□ -2.25
SEC28YIL076W YHR138CP38841 114 aaPredicted RBP1.02□□□□□ -2.25
SEC28YIL076W MSS2P40990 351 aa1.02□□□□□ -2.25
SEC28YIL076W IRC18P47056 224 aa1.02□□□□□ -2.25
SEC28YIL076W TDA4P47153 279 aa1.02□□□□□ -2.25
SEC28YIL076W ALG13P53178 202 aa1.02□□□□□ -2.25
SEC28YIL076W EST3Q03096 181 aa1.02□□□□□ -2.25
SEC28YIL076W MAK3Q03503 176 aa1.02□□□□□ -2.25
SEC28YIL076W GRX3Q03835 250 aa1.02□□□□□ -2.25
SEC28YIL076W VAM10Q08474 114 aa1.02□□□□□ -2.25
SEC28YIL076W YOR385WQ08909 290 aa1.02□□□□□ -2.25
SEC28YIL076W YPL225WQ08971 146 aaKnown RBP1.02□□□□□ -2.25
SEC28YIL076W RAD28Q12021 506 aa1.02□□□□□ -2.25
SEC28YIL076W TSC3Q3E790 80 aa1.02□□□□□ -2.25
SEC28YIL076W NTF2P33331 125 aaKnown RBP1.01□□□□□ -2.25
SEC28YIL076W HTD2P38790 280 aaKnown RBP1.01□□□□□ -2.25
SEC28YIL076W POR2P40478 281 aa1.01□□□□□ -2.25
SEC28YIL076W VMA10P48836 114 aaKnown RBP1.01□□□□□ -2.25
SEC28YIL076W ARO8P53090 500 aaKnown RBP1.01□□□□□ -2.25
SEC28YIL076W YGR025WP53216 100 aa1.01□□□□□ -2.25
SEC28YIL076W YGR042WP53227 271 aa1.01□□□□□ -2.25
SEC28YIL076W FYV6P53913 173 aa1.01□□□□□ -2.25
SEC28YIL076W YMR007WQ03675 126 aa1.01□□□□□ -2.25
SEC28YIL076W THI74Q04083 370 aa1.01□□□□□ -2.25
SEC28YIL076W YNG1Q08465 219 aa1.01□□□□□ -2.25
SEC28YIL076W FSF1Q12029 327 aaKnown RBP1.01□□□□□ -2.25
SEC28YIL076W YGL258W-AQ3E740 77 aa1.01□□□□□ -2.25
SEC28YIL076W YHR213WP0CI67 198 aa1□□□□□ -2.25
SEC28YIL076W FPR2P32472 135 aa1□□□□□ -2.25
SEC28YIL076W FMP23P38231 175 aa1□□□□□ -2.25
SEC28YIL076W YBR209WP38311 105 aa1□□□□□ -2.25
SEC28YIL076W VMA22P38784 181 aa1□□□□□ -2.25
SEC28YIL076W SNF11P38956 169 aa1□□□□□ -2.25
SEC28YIL076W GPI2P46961 280 aa1□□□□□ -2.25
SEC28YIL076W IMP2P46972 177 aa1□□□□□ -2.25
SEC28YIL076W YGR050CP53231 118 aa1□□□□□ -2.25
SEC28YIL076W MED4Q12343 284 aa1□□□□□ -2.25
SEC28YIL076W PET20Q99373 253 aa1□□□□□ -2.25
SEC28YIL076W QCR2P07257 368 aa0.99□□□□□ -2.25
SEC28YIL076W YCR016WP25617 290 aaKnown RBP0.99□□□□□ -2.25
SEC28YIL076W YBL071CP38185 102 aa0.99□□□□□ -2.25
SEC28YIL076W SNU13P39990 126 aaKnown RBP0.99□□□□□ -2.25
Retrieved 100 of 5,963 RNA–protein pairs in 43.4 ms