RNA–Protein interactions for RNA: YGR013W

SNU71, Transcript of Component of U1 snRNP required for mRNA splicing via spliceosome, yeastyeast

Gene SNU71, Length 1,863 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNU71YGR013W HHT1P61830 136 aa4.81□□□□□ -1.64
SNU71YGR013W TSA2Q04120 196 aa4.81□□□□□ -1.64
SNU71YGR013W TMC1Q08422 150 aaPredicted RBP4.81□□□□□ -1.64
SNU71YGR013W YPR145C-AQ2V2P0 78 aa4.81□□□□□ -1.64
SNU71YGR013W YIL134C-AQ45U18 67 aa4.81□□□□□ -1.64
SNU71YGR013W IRA1P18963 3092 aa4.81□□□□□ -1.64
SNU71YGR013W PAN3P36102 679 aaPredicted RBP4.8□□□□□ -1.64
SNU71YGR013W CTR2P38865 189 aa4.8□□□□□ -1.64
SNU71YGR013W VMA9Q3E7B6 73 aa4.8□□□□□ -1.64
SNU71YGR013W RPL30P14120 105 aaKnown RBP4.79□□□□□ -1.64
SNU71YGR013W TIF34P40217 347 aaKnown RBP4.79□□□□□ -1.64
SNU71YGR013W HAL1Q01766 294 aa4.79□□□□□ -1.64
SNU71YGR013W ADK1P07170 222 aaKnown RBP4.79□□□□□ -1.64
SNU71YGR013W EMP24P32803 203 aaKnown RBP4.79□□□□□ -1.64
SNU71YGR013W YFL019CP43576 117 aa4.79□□□□□ -1.64
SNU71YGR013W NAT3Q06504 195 aa4.79□□□□□ -1.64
SNU71YGR013W YNR034W-AQ3E841 98 aa4.79□□□□□ -1.64
SNU71YGR013W TIM9O74700 87 aa4.78□□□□□ -1.64
SNU71YGR013W AYR1P40471 297 aa4.78□□□□□ -1.64
SNU71YGR013W SMD3P43321 101 aaKnown RBP4.78□□□□□ -1.64
SNU71YGR013W XPT1P47165 209 aa4.78□□□□□ -1.64
SNU71YGR013W CSI2Q08054 341 aa4.78□□□□□ -1.64
SNU71YGR013W YOR268CQ08734 132 aa4.78□□□□□ -1.64
SNU71YGR013W YHR032W-AP0C5N6 59 aa4.77□□□□□ -1.65
SNU71YGR013W SWM2P40342 146 aa4.77□□□□□ -1.65
SNU71YGR013W DLS1P40366 167 aa4.77□□□□□ -1.65
SNU71YGR013W CYT2Q00873 224 aa4.77□□□□□ -1.65
SNU71YGR013W PAI3P01094 68 aa4.77□□□□□ -1.65
SNU71YGR013W YER039C-AP0CD97 72 aa4.77□□□□□ -1.65
SNU71YGR013W ANB1P19211 157 aa4.77□□□□□ -1.65
SNU71YGR013W FPR1P20081 114 aaKnown RBP4.77□□□□□ -1.65
SNU71YGR013W YCR099CP25657 155 aa4.77□□□□□ -1.65
SNU71YGR013W SNC2P33328 115 aa4.77□□□□□ -1.65
SNU71YGR013W MRPL11P36521 249 aaPredicted RBP4.77□□□□□ -1.65
SNU71YGR013W SDH4P37298 181 aa4.77□□□□□ -1.65
SNU71YGR013W ECO1P43605 281 aa4.77□□□□□ -1.65
SNU71YGR013W GPI11Q06636 219 aa4.77□□□□□ -1.65
SNU71YGR013W YOL131WQ08270 108 aa4.77□□□□□ -1.65
SNU71YGR013W MSW1P04803 379 aa4.76□□□□□ -1.65
SNU71YGR013W VMA11P32842 164 aa4.76□□□□□ -1.65
SNU71YGR013W UTH1P36135 365 aa4.76□□□□□ -1.65
SNU71YGR013W IPT1P38954 527 aa4.76□□□□□ -1.65
SNU71YGR013W RPL13BP40212 199 aaKnown RBP4.76□□□□□ -1.65
SNU71YGR013W VMA21P41806 77 aa4.76□□□□□ -1.65
SNU71YGR013W RPS20P38701 121 aaKnown RBP4.75□□□□□ -1.65
SNU71YGR013W RPL14BP38754 138 aaKnown RBP4.75□□□□□ -1.65
SNU71YGR013W VTC1P40046 129 aaRIP-Chip data4.75□□□□□ -1.65not detected
SNU71YGR013W CAB4P53332 305 aa4.75□□□□□ -1.65
SNU71YGR013W YDR274CP87283 123 aa4.75□□□□□ -1.65
SNU71YGR013W CSF1Q12150 2958 aa4.75□□□□□ -1.65
SNU71YGR013W YLR412C-AQ3E742 68 aa4.75□□□□□ -1.65
SNU71YGR013W MSB2P32334 1306 aa4.75□□□□□ -1.65
SNU71YGR013W PIR1Q03178 341 aa4.75□□□□□ -1.65
SNU71YGR013W YML122CQ03207 126 aa4.75□□□□□ -1.65
SNU71YGR013W RCE1Q03530 315 aa4.75□□□□□ -1.65
SNU71YGR013W SCW10Q04951 389 aa4.75□□□□□ -1.65
SNU71YGR013W YER134CP40081 178 aa4.74□□□□□ -1.65
SNU71YGR013W YPL073CP40323 161 aa4.74□□□□□ -1.65
SNU71YGR013W DSK2P48510 373 aa4.74□□□□□ -1.65
SNU71YGR013W THG1P53215 237 aaKnown RBP4.74□□□□□ -1.65
SNU71YGR013W HUT1Q12520 339 aa4.74□□□□□ -1.65
SNU71YGR013W ACC1Q00955 2233 aaKnown RBP4.74□□□□□ -1.65
SNU71YGR013W YNL200CP40165 246 aaKnown RBP4.73□□□□□ -1.65
SNU71YGR013W PRE5P40302 234 aaKnown RBP4.73□□□□□ -1.65
SNU71YGR013W FIP1P45976 327 aa4.73□□□□□ -1.65
SNU71YGR013W ERG25P53045 309 aa4.73□□□□□ -1.65
SNU71YGR013W BOL2P53082 120 aa4.73□□□□□ -1.65
SNU71YGR013W HYP2P23301 157 aaKnown RBP4.73□□□□□ -1.65
SNU71YGR013W YBR090CP38253 122 aa4.73□□□□□ -1.65
SNU71YGR013W FLX1P40464 311 aa4.73□□□□□ -1.65
SNU71YGR013W YFR054CP43622 192 aa4.73□□□□□ -1.65
SNU71YGR013W EMC4P53073 190 aa4.73□□□□□ -1.65
SNU71YGR013W PAU23Q07987 124 aa4.73□□□□□ -1.65
SNU71YGR013W NAT5Q08689 176 aa4.73□□□□□ -1.65
SNU71YGR013W PAU17Q12370 124 aa4.73□□□□□ -1.65
SNU71YGR013W YAR023CD6VPM8 179 aa4.72□□□□□ -1.65
SNU71YGR013W NOP1P15646 327 aaKnown RBP4.72□□□□□ -1.65
SNU71YGR013W SPC25P40014 221 aa4.72□□□□□ -1.65
SNU71YGR013W SAY1P53324 424 aa4.72□□□□□ -1.65
SNU71YGR013W GRX5Q02784 150 aa4.72□□□□□ -1.65
SNU71YGR013W YPR114WQ06107 315 aa4.72□□□□□ -1.65
SNU71YGR013W UBR1P19812 1950 aa4.72□□□□□ -1.65
SNU71YGR013W RPL40AP0CH08 128 aaKnown RBP4.71□□□□□ -1.66
SNU71YGR013W RPL40BP0CH09 128 aaKnown RBP4.71□□□□□ -1.66
SNU71YGR013W INO4P13902 151 aa4.71□□□□□ -1.66
SNU71YGR013W CLB6P32943 380 aa4.71□□□□□ -1.66
SNU71YGR013W YLR118CQ12354 227 aa4.71□□□□□ -1.66
SNU71YGR013W ATO3Q12359 275 aa4.71□□□□□ -1.66
SNU71YGR013W YOS1Q3E834 85 aa4.71□□□□□ -1.66
SNU71YGR013W ODC2Q99297 307 aa4.71□□□□□ -1.66
SNU71YGR013W UTR5P32630 166 aa4.71□□□□□ -1.66
SNU71YGR013W COF1Q03048 143 aaKnown RBP4.71□□□□□ -1.66
SNU71YGR013W RPS25BP0C0T4 108 aaKnown RBP4.7□□□□□ -1.66
SNU71YGR013W PHO85P17157 305 aa4.7□□□□□ -1.66
SNU71YGR013W MID2P36027 376 aa4.7□□□□□ -1.66
SNU71YGR013W AIM11P87275 137 aa4.7□□□□□ -1.66
SNU71YGR013W FYV12Q08559 129 aa4.7□□□□□ -1.66
SNU71YGR013W RPS25AQ3E792 108 aaPredicted RBP4.7□□□□□ -1.66
SNU71YGR013W CPA1P07258 411 aaKnown RBP4.69□□□□□ -1.66
SNU71YGR013W TMA19P35691 167 aaKnown RBP4.69□□□□□ -1.66
Retrieved 100 of 5,963 RNA–protein pairs in 15.8 ms