RNA–Protein interactions for RNA: YFL021W

GAT1, Transcript of Transcriptional activator of nitrogen catabolite repression genes, yeast

Gene GAT1, Length 1,533 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
GAT1	YFL021W	YNR064C	P53750	290 aa		4.81	□□□□□ -1.64
GAT1	YFL021W	MRX11	Q03079	207 aa		4.81	□□□□□ -1.64
GAT1	YFL021W	RAV2	Q03956	351 aa		4.81	□□□□□ -1.64
GAT1	YFL021W	GIM5	Q04493	163 aa		4.81	□□□□□ -1.64
GAT1	YFL021W	NDE2	Q07500	545 aa		4.81	□□□□□ -1.64
GAT1	YFL021W	PAU23	Q07987	124 aa		4.81	□□□□□ -1.64
GAT1	YFL021W	YDL157C	Q12082	118 aa		4.81	□□□□□ -1.64
GAT1	YFL021W	YOR029W	Q12243	111 aa		4.81	□□□□□ -1.64
GAT1	YFL021W	PAU17	Q12370	124 aa		4.81	□□□□□ -1.64
GAT1	YFL021W	HTB1	P02293	131 aa	Known RBP	4.8	□□□□□ -1.64
GAT1	YFL021W	YBL071C	P38185	102 aa		4.8	□□□□□ -1.64
GAT1	YFL021W	YHL037C	P38733	133 aa		4.8	□□□□□ -1.64
GAT1	YFL021W	PKR1	Q03880	122 aa	Known RBP	4.8	□□□□□ -1.64
GAT1	YFL021W	PBA1	Q05778	276 aa		4.8	□□□□□ -1.64
GAT1	YFL021W	CSM4	Q08955	156 aa		4.8	□□□□□ -1.64
GAT1	YFL021W	RPL39	P04650	51 aa		4.79	□□□□□ -1.64
GAT1	YFL021W	MRS1	P07266	363 aa		4.79	□□□□□ -1.64
GAT1	YFL021W	SEC4	P07560	215 aa	Known RBP	4.79	□□□□□ -1.64
GAT1	YFL021W	HAP3	P13434	144 aa		4.79	□□□□□ -1.64
GAT1	YFL021W	MIG1	P27705	504 aa		4.79	□□□□□ -1.64
GAT1	YFL021W	DOG2	P38773	246 aa		4.79	□□□□□ -1.64
GAT1	YFL021W	YFL051C	P43552	160 aa		4.79	□□□□□ -1.64
GAT1	YFL021W	YGL118C	P53132	145 aa		4.79	□□□□□ -1.64
GAT1	YFL021W	TVP18	Q04767	167 aa		4.79	□□□□□ -1.64
GAT1	YFL021W	TRA1	P38811	3744 aa		4.79	□□□□□ -1.64
GAT1	YFL021W	UTR5	P32630	166 aa		4.78	□□□□□ -1.64
GAT1	YFL021W	ZRT1	P32804	376 aa		4.78	□□□□□ -1.64
GAT1	YFL021W	SFT2	P38166	215 aa		4.78	□□□□□ -1.64
GAT1	YFL021W	YGP1	P38616	354 aa	Known RBP	4.78	□□□□□ -1.64
GAT1	YFL021W	LST8	P41318	303 aa		4.78	□□□□□ -1.64
GAT1	YFL021W	TDA4	P47153	279 aa		4.78	□□□□□ -1.64
GAT1	YFL021W	BRP1	P53194	125 aa		4.78	□□□□□ -1.64
GAT1	YFL021W	YPL162C	Q12042	273 aa		4.78	□□□□□ -1.64
GAT1	YFL021W	CYC3	P06182	269 aa		4.77	□□□□□ -1.65
GAT1	YFL021W	LSM2	P38203	95 aa	Known RBP	4.77	□□□□□ -1.65
GAT1	YFL021W	YBR220C	P38318	560 aa		4.77	□□□□□ -1.65
GAT1	YFL021W	TOM7	P53507	60 aa		4.77	□□□□□ -1.65
GAT1	YFL021W	HST4	P53688	370 aa		4.77	□□□□□ -1.65
GAT1	YFL021W	YNL046W	P53956	172 aa		4.77	□□□□□ -1.65
GAT1	YFL021W	YMR181C	Q03231	154 aa		4.77	□□□□□ -1.65
GAT1	YFL021W	COX2	P00410	251 aa		4.77	□□□□□ -1.65
GAT1	YFL021W	MRPL31	P14063	131 aa	Predicted RBP	4.77	□□□□□ -1.65
GAT1	YFL021W	SEC11	P15367	167 aa		4.77	□□□□□ -1.65
GAT1	YFL021W	FZF1	P32805	299 aa		4.77	□□□□□ -1.65
GAT1	YFL021W	FYV4	P38783	130 aa	Predicted RBP	4.77	□□□□□ -1.65
GAT1	YFL021W	NCA3	P46955	337 aa		4.77	□□□□□ -1.65
GAT1	YFL021W	YGL230C	P53074	147 aa		4.77	□□□□□ -1.65
GAT1	YFL021W	SDH7	Q04401	133 aa		4.77	□□□□□ -1.65
GAT1	YFL021W	YKR045C	P36138	183 aa		4.76	□□□□□ -1.65
GAT1	YFL021W	SEC72	P39742	193 aa	Known RBP	4.76	□□□□□ -1.65
GAT1	YFL021W	HUA1	P40325	198 aa		4.76	□□□□□ -1.65
GAT1	YFL021W	HAC1	P41546	238 aa		4.76	□□□□□ -1.65
GAT1	YFL021W	SDS23	P53172	527 aa		4.76	□□□□□ -1.65
GAT1	YFL021W	SED1	Q01589	338 aa		4.76	□□□□□ -1.65
GAT1	YFL021W	MIX17	Q03667	156 aa		4.76	□□□□□ -1.65
GAT1	YFL021W	CSI2	Q08054	341 aa		4.76	□□□□□ -1.65
GAT1	YFL021W	FSF1	Q12029	327 aa	Known RBP	4.76	□□□□□ -1.65
GAT1	YFL021W	HTB2	P02294	131 aa		4.75	□□□□□ -1.65
GAT1	YFL021W	HHF1	P02309	103 aa	Known RBP	4.75	□□□□□ -1.65
GAT1	YFL021W	DDI2	P0CH63	225 aa		4.75	□□□□□ -1.65
GAT1	YFL021W	DDI3	P0CH64	225 aa		4.75	□□□□□ -1.65
GAT1	YFL021W	RPL23A	P0CX41	137 aa	Known RBP	4.75	□□□□□ -1.65
GAT1	YFL021W	RPL23B	P0CX42	137 aa	Known RBP	4.75	□□□□□ -1.65
GAT1	YFL021W	PRS4	P38063	326 aa	Predicted RBP	4.75	□□□□□ -1.65
GAT1	YFL021W	ADH5	P38113	351 aa	Known RBP	4.75	□□□□□ -1.65
GAT1	YFL021W	PAU7	P39545	55 aa		4.75	□□□□□ -1.65
GAT1	YFL021W	YNL200C	P40165	246 aa	Known RBP	4.75	□□□□□ -1.65
GAT1	YFL021W	WWM1	P43582	211 aa	Known RBP	4.75	□□□□□ -1.65
GAT1	YFL021W	BET5	Q03630	159 aa		4.75	□□□□□ -1.65
GAT1	YFL021W	DAL80	P26343	269 aa		4.74	□□□□□ -1.65
GAT1	YFL021W	CTR2	P38865	189 aa		4.74	□□□□□ -1.65
GAT1	YFL021W	YFR045W	P43617	309 aa		4.74	□□□□□ -1.65
GAT1	YFL021W	CWC27	Q02770	301 aa		4.74	□□□□□ -1.65
GAT1	YFL021W	ARC18	Q05933	178 aa	Known RBP	4.74	□□□□□ -1.65
GAT1	YFL021W	YHR213W	P0CI67	198 aa		4.73	□□□□□ -1.65
GAT1	YFL021W	YPS1	P32329	569 aa		4.73	□□□□□ -1.65
GAT1	YFL021W	YER188W	P40103	239 aa		4.73	□□□□□ -1.65
GAT1	YFL021W	VHS2	P40463	436 aa		4.73	□□□□□ -1.65
GAT1	YFL021W	MSL1	P40567	111 aa	Predicted RBP	4.73	□□□□□ -1.65
GAT1	YFL021W	IMP2	P46972	177 aa		4.73	□□□□□ -1.65
GAT1	YFL021W	GRH1	Q04410	372 aa	Known RBP	4.73	□□□□□ -1.65
GAT1	YFL021W	YLR050C	Q12155	161 aa	Known RBP	4.73	□□□□□ -1.65
GAT1	YFL021W	TRP1	P00912	224 aa		4.72	□□□□□ -1.65
GAT1	YFL021W	YPR170W-B	P0C5R9	85 aa		4.72	□□□□□ -1.65
GAT1	YFL021W	ARO2	P28777	376 aa	Known RBP	4.72	□□□□□ -1.65
GAT1	YFL021W	THG1	P53215	237 aa	Known RBP	4.72	□□□□□ -1.65
GAT1	YFL021W	UPS3	Q04006	179 aa		4.72	□□□□□ -1.65
GAT1	YFL021W	DPP1	Q05521	289 aa		4.72	□□□□□ -1.65
GAT1	YFL021W	CPT1	P17898	393 aa		4.72	□□□□□ -1.65
GAT1	YFL021W	RRT1	P38192	103 aa		4.72	□□□□□ -1.65
GAT1	YFL021W	ECM14	P38836	430 aa		4.72	□□□□□ -1.65
GAT1	YFL021W	YGR017W	P53210	297 aa		4.72	□□□□□ -1.65
GAT1	YFL021W	POP3	P53833	195 aa	Predicted RBP	4.72	□□□□□ -1.65
GAT1	YFL021W	SWT21	P53873	357 aa	Predicted RBP	4.72	□□□□□ -1.65
GAT1	YFL021W	DAD4	P69851	72 aa		4.72	□□□□□ -1.65
GAT1	YFL021W	DAD1	Q12248	94 aa		4.72	□□□□□ -1.65
GAT1	YFL021W	ATO3	Q12359	275 aa		4.72	□□□□□ -1.65
GAT1	YFL021W	WIP1	Q2V2P8	89 aa		4.72	□□□□□ -1.65
GAT1	YFL021W	MRPL20	P22354	195 aa	Predicted RBP	4.71	□□□□□ -1.66
GAT1	YFL021W	TIR2	P33890	251 aa		4.71	□□□□□ -1.66

Retrieved 100 of 5,963 RNA–protein pairs in 32.2 ms