RNA–Protein interactions for RNA: YER018C

SPC25, Transcript of Component of the kinetochore-associated Ndc80 complex, yeastyeast

Gene SPC25, Length 666 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPC25YER018C MSN1P22148 382 aa8.34□□□□□ -1.07
SPC25YER018C MIG1P27705 504 aa8.34□□□□□ -1.07
SPC25YER018C QRI5P32344 111 aa8.34□□□□□ -1.07
SPC25YER018C PAU5P43575 122 aa8.34□□□□□ -1.07
SPC25YER018C HAM1P47119 197 aaKnown RBP8.34□□□□□ -1.07
SPC25YER018C YGR026WP53217 278 aa8.34□□□□□ -1.07
SPC25YER018C TRI1Q05024 226 aa8.34□□□□□ -1.07
SPC25YER018C TIR1P10863 254 aa8.33□□□□□ -1.08
SPC25YER018C YFR045WP43617 309 aa8.33□□□□□ -1.08
SPC25YER018C YGL185CP53100 379 aa8.33□□□□□ -1.08
SPC25YER018C YNR034W-AQ3E841 98 aa8.33□□□□□ -1.08
SPC25YER018C CUP2P15315 225 aa8.32□□□□□ -1.08
SPC25YER018C ALG13P53178 202 aa8.32□□□□□ -1.08
SPC25YER018C YPL162CQ12042 273 aa8.32□□□□□ -1.08
SPC25YER018C YNL146C-AQ3E7Z1 64 aa8.32□□□□□ -1.08
SPC25YER018C UTP20P35194 2493 aaKnown RBP8.32□□□□□ -1.08
SPC25YER018C MPC2P38857 129 aa8.31□□□□□ -1.08
SPC25YER018C IRC22P40006 225 aa8.31□□□□□ -1.08
SPC25YER018C GIM5Q04493 163 aa8.31□□□□□ -1.08
SPC25YER018C YER135CP40082 130 aa8.3□□□□□ -1.08
SPC25YER018C YLR342W-AQ3E810 57 aa8.3□□□□□ -1.08
SPC25YER018C HMRA1P0CY11 126 aa8.29□□□□□ -1.08
SPC25YER018C PAM17P36147 197 aa8.29□□□□□ -1.08
SPC25YER018C PAU19P0CE85 124 aa8.28□□□□□ -1.08
SPC25YER018C PAU21P0CE86 164 aa8.28□□□□□ -1.08
SPC25YER018C PAU22P0CE87 164 aa8.28□□□□□ -1.08
SPC25YER018C MRPL31P14063 131 aaPredicted RBP8.28□□□□□ -1.08
SPC25YER018C CPT1P17898 393 aa8.28□□□□□ -1.08
SPC25YER018C PAU3P25610 124 aa8.28□□□□□ -1.08
SPC25YER018C MIX23P38162 196 aa8.28□□□□□ -1.08
SPC25YER018C YHR022CP38763 256 aa8.28□□□□□ -1.08
SPC25YER018C GET2P40056 285 aa8.28□□□□□ -1.08
SPC25YER018C MIC26P50087 233 aa8.28□□□□□ -1.08
SPC25YER018C YMR244WQ04018 355 aa8.28□□□□□ -1.08
SPC25YER018C CSM4Q08955 156 aa8.28□□□□□ -1.08
SPC25YER018C AIR2Q12476 344 aaKnown RBP8.28□□□□□ -1.08
SPC25YER018C RPB11P38902 120 aa8.27□□□□□ -1.09
SPC25YER018C GRH1Q04410 372 aaKnown RBP8.27□□□□□ -1.09
SPC25YER018C UTP23Q12339 254 aaKnown RBP8.27□□□□□ -1.09
SPC25YER018C MRPL33P20084 86 aa8.26□□□□□ -1.09
SPC25YER018C MIG3P39943 394 aa8.26□□□□□ -1.09
SPC25YER018C CCW12Q12127 133 aa8.26□□□□□ -1.09
SPC25YER018C YOL085CQ99345 113 aa8.26□□□□□ -1.09
SPC25YER018C SPI1P40092 148 aa8.25□□□□□ -1.09
SPC25YER018C YJR096WP47137 282 aa8.25□□□□□ -1.09
SPC25YER018C YDR274CP87283 123 aa8.25□□□□□ -1.09
SPC25YER018C UPS3Q04006 179 aa8.25□□□□□ -1.09
SPC25YER018C YPR063CQ12160 140 aa8.25□□□□□ -1.09
SPC25YER018C MDM10P18409 493 aa8.24□□□□□ -1.09
SPC25YER018C YGR017WP53210 297 aa8.24□□□□□ -1.09
SPC25YER018C MRPS8Q03799 155 aa8.24□□□□□ -1.09
SPC25YER018C YDR215CQ12240 137 aa8.24□□□□□ -1.09
SPC25YER018C TIM22Q12328 207 aa8.24□□□□□ -1.09
SPC25YER018C RPL12AP0CX53 165 aaKnown RBP8.23□□□□□ -1.09
SPC25YER018C RPL12BP0CX54 165 aa8.23□□□□□ -1.09
SPC25YER018C THG1P53215 237 aaKnown RBP8.23□□□□□ -1.09
SPC25YER018C DIA1P54005 336 aa8.23□□□□□ -1.09
SPC25YER018C ATP16Q12165 160 aa8.23□□□□□ -1.09
SPC25YER018C DYN1P36022 4092 aa8.23□□□□□ -1.09
SPC25YER018C SUR2P38992 349 aa8.22□□□□□ -1.09
SPC25YER018C VPS71Q03433 280 aa8.22□□□□□ -1.09
SPC25YER018C POR1P04840 283 aaKnown RBP8.21□□□□□ -1.1
SPC25YER018C PAU7P39545 55 aa8.21□□□□□ -1.1
SPC25YER018C COX16P47081 118 aa8.21□□□□□ -1.1
SPC25YER018C SDS23P53172 527 aa8.21□□□□□ -1.1
SPC25YER018C ARL3Q02804 198 aa8.21□□□□□ -1.1
SPC25YER018C MSC3Q05812 728 aa8.21□□□□□ -1.1
SPC25YER018C POM33Q12164 279 aa8.21□□□□□ -1.1
SPC25YER018C VMA16P23968 213 aa8.2□□□□□ -1.1
SPC25YER018C KEG1P43614 200 aa8.2□□□□□ -1.1
SPC25YER018C GTO3Q04806 366 aa8.2□□□□□ -1.1
SPC25YER018C YLR122CQ12312 125 aa8.2□□□□□ -1.1
SPC25YER018C RPS22BQ3E7Y3 130 aaKnown RBP8.19□□□□□ -1.1
SPC25YER018C Q0255P03881 472 aa8.18□□□□□ -1.1
SPC25YER018C RPL27AP0C2H6 136 aaKnown RBP8.18□□□□□ -1.1
SPC25YER018C YHR140WP38842 239 aa8.18□□□□□ -1.1
SPC25YER018C YGR149WP48236 432 aa8.18□□□□□ -1.1
SPC25YER018C DUO1P53168 247 aaKnown RBP8.18□□□□□ -1.1
SPC25YER018C ATG33Q06485 197 aa8.18□□□□□ -1.1
SPC25YER018C TMA17Q12513 150 aa8.18□□□□□ -1.1
SPC25YER018C WIP1Q2V2P8 89 aa8.18□□□□□ -1.1
SPC25YER018C VAR1P02381 398 aa8.17□□□□□ -1.1
SPC25YER018C TY1A-HP0C2I4 478 aaKnown RBP8.17□□□□□ -1.1
SPC25YER018C AGA1P32323 725 aa8.17□□□□□ -1.1
SPC25YER018C ZRT1P32804 376 aa8.17□□□□□ -1.1
SPC25YER018C CYT2Q00873 224 aa8.17□□□□□ -1.1
SPC25YER018C GPI19Q04082 140 aa8.17□□□□□ -1.1
SPC25YER018C YCR024C-BQ3E7Z8 88 aa8.17□□□□□ -1.1
SPC25YER018C SEC4P07560 215 aaKnown RBP8.16□□□□□ -1.1
SPC25YER018C RPL23AP0CX41 137 aaKnown RBP8.16□□□□□ -1.1
SPC25YER018C RPL23BP0CX42 137 aaKnown RBP8.16□□□□□ -1.1
SPC25YER018C MRPL28P36527 147 aa8.16□□□□□ -1.1
SPC25YER018C ARC18Q05933 178 aaKnown RBP8.16□□□□□ -1.1
SPC25YER018C RPS11AP0CX47 156 aaKnown RBP8.15□□□□□ -1.1
SPC25YER018C RPS11BP0CX48 156 aaKnown RBP8.15□□□□□ -1.1
SPC25YER018C YFR035CP43608 114 aa8.15□□□□□ -1.1
SPC25YER018C YLR281CQ05863 155 aa8.15□□□□□ -1.1
SPC25YER018C FSF1Q12029 327 aaKnown RBP8.15□□□□□ -1.1
SPC25YER018C RPL2AP0CX45 254 aaKnown RBP8.14□□□□□ -1.11
SPC25YER018C RPL2BP0CX46 254 aaKnown RBP8.14□□□□□ -1.11
Retrieved 100 of 5,963 RNA–protein pairs in 87.9 ms