RNA–Protein interactions for RNA: YDR452W

PPN1, Transcript of Vacuolar endopolyphosphatase with a role in phosphate metabolism, yeast

Gene PPN1, Length 2,025 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PPN1	YDR452W	POG1	P40473	351 aa		0.4	□□□□□ -2.34
PPN1	YDR452W	NQM1	P53228	333 aa	Predicted RBP	0.4	□□□□□ -2.35
PPN1	YDR452W	FCY1	Q12178	158 aa		0.4	□□□□□ -2.35
PPN1	YDR452W	RPO41	P13433	1351 aa	Known RBP	0.39	□□□□□ -2.35
PPN1	YDR452W	KIN28	P06242	306 aa		0.39	□□□□□ -2.35
PPN1	YDR452W	YGR269W	P40326	108 aa		0.39	□□□□□ -2.35
PPN1	YDR452W	YML079W	Q03629	201 aa		0.39	□□□□□ -2.35
PPN1	YDR452W	YDL157C	Q12082	118 aa		0.39	□□□□□ -2.35
PPN1	YDR452W	HHY1	P39982	102 aa		0.38	□□□□□ -2.35
PPN1	YDR452W	YET3	Q07451	203 aa		0.38	□□□□□ -2.35
PPN1	YDR452W	RAD6	P06104	172 aa		0.38	□□□□□ -2.35
PPN1	YDR452W	JAC1	P53193	184 aa		0.38	□□□□□ -2.35
PPN1	YDR452W	TIM13	P53299	105 aa		0.38	□□□□□ -2.35
PPN1	YDR452W	NUF2	P33895	451 aa		0.37	□□□□□ -2.35
PPN1	YDR452W	GRX3	Q03835	250 aa		0.37	□□□□□ -2.35
PPN1	YDR452W	MYO1	P08964	1928 aa		0.37	□□□□□ -2.35
PPN1	YDR452W	SPS2	P08459	502 aa		0.37	□□□□□ -2.35
PPN1	YDR452W	RPS25B	P0C0T4	108 aa	Known RBP	0.37	□□□□□ -2.35
PPN1	YDR452W	SRX1	P36077	127 aa		0.37	□□□□□ -2.35
PPN1	YDR452W	YEL028W	P39989	153 aa		0.37	□□□□□ -2.35
PPN1	YDR452W	GLC8	P41818	229 aa		0.37	□□□□□ -2.35
PPN1	YDR452W	GLR1	P41921	483 aa	Known RBP	0.37	□□□□□ -2.35
PPN1	YDR452W	XPT1	P47165	209 aa		0.37	□□□□□ -2.35
PPN1	YDR452W	HOP2	P53187	214 aa		0.37	□□□□□ -2.35
PPN1	YDR452W	SYM1	Q06563	197 aa		0.37	□□□□□ -2.35
PPN1	YDR452W	RPS25A	Q3E792	108 aa	Predicted RBP	0.37	□□□□□ -2.35
PPN1	YDR452W	YHR213W-B	Q8TGK1	99 aa		0.37	□□□□□ -2.35
PPN1	YDR452W	CSH1	P38287	376 aa		0.36	□□□□□ -2.35
PPN1	YDR452W	APS3	P47064	194 aa		0.36	□□□□□ -2.35
PPN1	YDR452W	INO4	P13902	151 aa		0.35	□□□□□ -2.35
PPN1	YDR452W	CIN5	P40917	295 aa		0.35	□□□□□ -2.35
PPN1	YDR452W	SED1	Q01589	338 aa		0.35	□□□□□ -2.35
PPN1	YDR452W	YDL241W	Q07738	123 aa		0.35	□□□□□ -2.35
PPN1	YDR452W	RIF1	P29539	1916 aa		0.35	□□□□□ -2.35
PPN1	YDR452W	MOT1	P32333	1867 aa		0.35	□□□□□ -2.35
PPN1	YDR452W	TRR1	P29509	319 aa	Known RBP	0.35	□□□□□ -2.35
PPN1	YDR452W	ATP7	P30902	174 aa		0.35	□□□□□ -2.35
PPN1	YDR452W	HRD1	Q08109	551 aa		0.35	□□□□□ -2.35
PPN1	YDR452W	PRM3	Q08931	133 aa		0.35	□□□□□ -2.35
PPN1	YDR452W	ADE6	P38972	1358 aa	Known RBP	0.34	□□□□□ -2.35
PPN1	YDR452W	YBR027C	P38220	110 aa		0.34	□□□□□ -2.36
PPN1	YDR452W	CCC1	P47818	322 aa		0.34	□□□□□ -2.36
PPN1	YDR452W	GEP7	P53171	287 aa		0.34	□□□□□ -2.36
PPN1	YDR452W	LIP1	Q03579	150 aa		0.34	□□□□□ -2.36
PPN1	YDR452W	BPH1	P25356	2167 aa		0.34	□□□□□ -2.36
PPN1	YDR452W	SPT14	P32363	452 aa		0.33	□□□□□ -2.36
PPN1	YDR452W	ATG10	Q07879	167 aa		0.33	□□□□□ -2.36
PPN1	YDR452W	GRE1	Q08969	168 aa		0.33	□□□□□ -2.36
PPN1	YDR452W	CMC4	Q3E7A9	73 aa		0.33	□□□□□ -2.36
PPN1	YDR452W	PEX11	Q12462	236 aa		0.33	□□□□□ -2.36
PPN1	YDR452W	CCW14	O13547	238 aa		0.32	□□□□□ -2.36
PPN1	YDR452W	THI74	Q04083	370 aa		0.32	□□□□□ -2.36
PPN1	YDR452W	YPR114W	Q06107	315 aa		0.32	□□□□□ -2.36
PPN1	YDR452W	VAM10	Q08474	114 aa		0.32	□□□□□ -2.36
PPN1	YDR452W	YPT31	P38555	223 aa	Known RBP	0.31	□□□□□ -2.36
PPN1	YDR452W	CDC39	P25655	2108 aa	Known RBP	0.31	□□□□□ -2.36
PPN1	YDR452W	BLM10	P43583	2143 aa		0.31	□□□□□ -2.36
PPN1	YDR452W	RAD51	P25454	400 aa		0.31	□□□□□ -2.36
PPN1	YDR452W	ATG8	P38182	117 aa	RIP-Chip data	0.31	□□□□□ -2.36	not detected
PPN1	YDR452W	YEL014C	P39999	101 aa		0.31	□□□□□ -2.36
PPN1	YDR452W	UIP4	Q08926	304 aa		0.31	□□□□□ -2.36
PPN1	YDR452W	MLP1	Q02455	1875 aa	Known RBP	0.3	□□□□□ -2.36
PPN1	YDR452W	HSK3	P69852	69 aa		0.3	□□□□□ -2.36
PPN1	YDR452W	YDR102C	Q03864	110 aa		0.3	□□□□□ -2.36
PPN1	YDR452W	PLP1	Q04004	230 aa		0.3	□□□□□ -2.36
PPN1	YDR452W	YLR050C	Q12155	161 aa	Known RBP	0.3	□□□□□ -2.36
PPN1	YDR452W	PEX34	P25584	144 aa		0.3	□□□□□ -2.36
PPN1	YDR452W	SEC72	P39742	193 aa	Known RBP	0.3	□□□□□ -2.36
PPN1	YDR452W	YIP3	P53633	176 aa		0.3	□□□□□ -2.36
PPN1	YDR452W	YNL122C	P53921	115 aa	Predicted RBP	0.3	□□□□□ -2.36
PPN1	YDR452W	UBC6	P33296	250 aa	Predicted RBP	0.29	□□□□□ -2.36
PPN1	YDR452W	PTC1	P35182	281 aa		0.29	□□□□□ -2.36
PPN1	YDR452W	YDR278C	Q05612	105 aa		0.29	□□□□□ -2.36
PPN1	YDR452W	RIB3	Q99258	208 aa		0.29	□□□□□ -2.36
PPN1	YDR452W	HSP150	P32478	413 aa		0.28	□□□□□ -2.36
PPN1	YDR452W	SRP102	P36057	244 aa	Predicted RBP	0.28	□□□□□ -2.36
PPN1	YDR452W	ECM31	P38122	312 aa		0.28	□□□□□ -2.36
PPN1	YDR452W	MGR2	Q02889	113 aa		0.28	□□□□□ -2.36
PPN1	YDR452W	RPS22A	P0C0W1	130 aa	Known RBP	0.28	□□□□□ -2.37
PPN1	YDR452W	YNR064C	P53750	290 aa		0.28	□□□□□ -2.37
PPN1	YDR452W	YOR072W	Q08486	104 aa		0.28	□□□□□ -2.37
PPN1	YDR452W	RPS22B	Q3E7Y3	130 aa	Known RBP	0.28	□□□□□ -2.37
PPN1	YDR452W	UBR1	P19812	1950 aa		0.28	□□□□□ -2.37
PPN1	YDR452W	STT4	P37297	1900 aa		0.28	□□□□□ -2.37
PPN1	YDR452W	TRS20	P38334	175 aa		0.27	□□□□□ -2.37
PPN1	YDR452W	YMR141C	P40211	102 aa		0.27	□□□□□ -2.37
PPN1	YDR452W	HAP2	P06774	265 aa		0.26	□□□□□ -2.37
PPN1	YDR452W	CMD1	P06787	147 aa	Known RBP	0.26	□□□□□ -2.37
PPN1	YDR452W	RPS29A	P41057	56 aa	Known RBP	0.26	□□□□□ -2.37
PPN1	YDR452W	GIM3	P53900	129 aa		0.26	□□□□□ -2.37
PPN1	YDR452W	SEN15	Q04675	128 aa		0.26	□□□□□ -2.37
PPN1	YDR452W	NKP2	Q06162	153 aa		0.26	□□□□□ -2.37
PPN1	YDR452W	Q0297	Q9ZZV8	51 aa		0.26	□□□□□ -2.37
PPN1	YDR452W	SAC3	P46674	1301 aa		0.26	□□□□□ -2.37
PPN1	YDR452W	SRP14	P38985	146 aa		0.26	□□□□□ -2.37
PPN1	YDR452W	YNL140C	P53910	189 aa		0.26	□□□□□ -2.37
PPN1	YDR452W	NMA1	Q06178	401 aa	Known RBP	0.26	□□□□□ -2.37
PPN1	YDR452W	HYP2	P23301	157 aa	Known RBP	0.25	□□□□□ -2.37
PPN1	YDR452W	MRS4	P23500	304 aa		0.25	□□□□□ -2.37
PPN1	YDR452W	EGD2	P38879	174 aa	Known RBP	0.25	□□□□□ -2.37

Retrieved 100 of 5,963 RNA–protein pairs in 28.7 ms