RNA–Protein interactions for RNA: YDR443C

SSN2, Transcript of Subunit of the RNA polymerase II mediator complex, yeastyeast

Gene SSN2, Length 4,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSN2YDR443C POR1P04840 283 aaKnown RBP1.96□□□□□ -2.1
SSN2YDR443C SPT15P13393 240 aaKnown RBP1.96□□□□□ -2.1
SSN2YDR443C ARC15P40518 154 aaRIP-Chip data1.96□□□□□ -2.1not detected
SSN2YDR443C YIL054WP40524 105 aa1.96□□□□□ -2.1
SSN2YDR443C RAD10P06838 210 aa1.96□□□□□ -2.1
SSN2YDR443C RPL40AP0CH08 128 aaKnown RBP1.96□□□□□ -2.1
SSN2YDR443C RPL40BP0CH09 128 aaKnown RBP1.96□□□□□ -2.1
SSN2YDR443C SCM4P32564 187 aa1.96□□□□□ -2.1
SSN2YDR443C NSE4P43124 402 aa1.96□□□□□ -2.1
SSN2YDR443C YFR035CP43608 114 aa1.96□□□□□ -2.1
SSN2YDR443C CPA1P07258 411 aaKnown RBP1.96□□□□□ -2.1
SSN2YDR443C YHR125WP38831 101 aa1.96□□□□□ -2.1
SSN2YDR443C SNU13P39990 126 aaKnown RBP1.96□□□□□ -2.1
SSN2YDR443C CCS1P40202 249 aaKnown RBP1.96□□□□□ -2.1
SSN2YDR443C YNR062CP53748 327 aa1.96□□□□□ -2.1
SSN2YDR443C COX5BP00425 151 aa1.95□□□□□ -2.1
SSN2YDR443C DSK2P48510 373 aa1.95□□□□□ -2.1
SSN2YDR443C RSM10Q03201 203 aa1.95□□□□□ -2.1
SSN2YDR443C YER078W-AQ3E7A2 54 aa1.95□□□□□ -2.1
SSN2YDR443C YOR376W-AQ3E805 51 aa1.95□□□□□ -2.1
SSN2YDR443C YCR050CP25630 102 aa1.95□□□□□ -2.1
SSN2YDR443C SDH3P33421 198 aa1.95□□□□□ -2.1
SSN2YDR443C YET1P35723 206 aa1.95□□□□□ -2.1
SSN2YDR443C GPI18P38211 433 aa1.95□□□□□ -2.1
SSN2YDR443C TVP15Q03860 143 aa1.95□□□□□ -2.1
SSN2YDR443C RRT7Q07829 113 aa1.95□□□□□ -2.1
SSN2YDR443C GLT1Q12680 2145 aaKnown RBP1.95□□□□□ -2.1
SSN2YDR443C YCR043CP25361 127 aa1.95□□□□□ -2.1
SSN2YDR443C YND1P40009 630 aa1.95□□□□□ -2.1
SSN2YDR443C IRC25Q07951 179 aa1.95□□□□□ -2.1
SSN2YDR443C LAA1P39526 2014 aa1.95□□□□□ -2.1
SSN2YDR443C YCR099CP25657 155 aa1.94□□□□□ -2.1
SSN2YDR443C PAM16P42949 149 aa1.94□□□□□ -2.1
SSN2YDR443C SPG1P50088 95 aa1.94□□□□□ -2.1
SSN2YDR443C YNR064CP53750 290 aa1.94□□□□□ -2.1
SSN2YDR443C DDR48P18899 430 aaKnown RBP1.94□□□□□ -2.1
SSN2YDR443C SPC25P40014 221 aa1.94□□□□□ -2.1
SSN2YDR443C GON7P46984 123 aa1.94□□□□□ -2.1
SSN2YDR443C DDP1Q99321 188 aaKnown RBP1.94□□□□□ -2.1
SSN2YDR443C RPL9AP05738 191 aaKnown RBP1.94□□□□□ -2.1
SSN2YDR443C FPR1P20081 114 aaKnown RBP1.94□□□□□ -2.1
SSN2YDR443C YIR035CP40579 254 aa1.94□□□□□ -2.1
SSN2YDR443C RPL9BP51401 191 aaKnown RBP1.94□□□□□ -2.1
SSN2YDR443C LIP1Q03579 150 aa1.94□□□□□ -2.1
SSN2YDR443C MRPS8Q03799 155 aa1.94□□□□□ -2.1
SSN2YDR443C ATP20Q12233 115 aa1.94□□□□□ -2.1
SSN2YDR443C RPL22AP05749 121 aaKnown RBP1.94□□□□□ -2.1
SSN2YDR443C YIL152WP40455 235 aa1.94□□□□□ -2.1
SSN2YDR443C YMR082CQ04276 118 aa1.94□□□□□ -2.1
SSN2YDR443C FIT1Q04433 528 aa1.94□□□□□ -2.1
SSN2YDR443C RAD28Q12021 506 aa1.94□□□□□ -2.1
SSN2YDR443C SMT3Q12306 101 aaKnown RBP1.94□□□□□ -2.1
SSN2YDR443C SPO73P40031 143 aa1.93□□□□□ -2.1
SSN2YDR443C YMR295CQ03559 197 aa1.93□□□□□ -2.1
SSN2YDR443C YHP1Q04116 353 aa1.93□□□□□ -2.1
SSN2YDR443C CSI2Q08054 341 aa1.93□□□□□ -2.1
SSN2YDR443C KSH1Q8TGJ3 72 aa1.93□□□□□ -2.1
SSN2YDR443C MSB2P32334 1306 aa1.93□□□□□ -2.1
SSN2YDR443C UBC4P15731 148 aa1.93□□□□□ -2.1
SSN2YDR443C ECO1P43605 281 aa1.93□□□□□ -2.1
SSN2YDR443C MDH2P22133 377 aa1.93□□□□□ -2.1
SSN2YDR443C YBL059WP34224 193 aa1.93□□□□□ -2.1
SSN2YDR443C DOC1P53068 250 aa1.93□□□□□ -2.1
SSN2YDR443C YDR102CQ03864 110 aa1.93□□□□□ -2.1
SSN2YDR443C SRL1Q08673 210 aa1.93□□□□□ -2.1
SSN2YDR443C MSW1P04803 379 aa1.92□□□□□ -2.1
SSN2YDR443C RRT1P38192 103 aa1.92□□□□□ -2.1
SSN2YDR443C YHR130CP38834 111 aa1.92□□□□□ -2.1
SSN2YDR443C GTT1P40582 234 aa1.92□□□□□ -2.1
SSN2YDR443C RPL13AQ12690 199 aaPredicted RBP1.92□□□□□ -2.1
SSN2YDR443C EMP24P32803 203 aaKnown RBP1.92□□□□□ -2.1
SSN2YDR443C KNH1P50112 268 aa1.92□□□□□ -2.1
SSN2YDR443C MPC3P53311 146 aa1.92□□□□□ -2.1
SSN2YDR443C MED11Q99278 115 aa1.92□□□□□ -2.1
SSN2YDR443C YEL045CP32616 141 aa1.92□□□□□ -2.1
SSN2YDR443C UMP1P38293 148 aa1.92□□□□□ -2.1
SSN2YDR443C PIR5P46999 287 aa1.92□□□□□ -2.1
SSN2YDR443C YOR385WQ08909 290 aa1.92□□□□□ -2.1
SSN2YDR443C YAL064WP39711 94 aa1.91□□□□□ -2.1
SSN2YDR443C SCW4P53334 386 aaKnown RBP1.91□□□□□ -2.1
SSN2YDR443C YCL001W-AP87012 153 aa1.91□□□□□ -2.1
SSN2YDR443C ODC2Q99297 307 aa1.91□□□□□ -2.1
SSN2YDR443C FZF1P32805 299 aa1.91□□□□□ -2.1
SSN2YDR443C YPR063CQ12160 140 aa1.91□□□□□ -2.1
SSN2YDR443C CUP1-1P0CX80 61 aa1.91□□□□□ -2.1
SSN2YDR443C CUP1-2P0CX81 61 aa1.91□□□□□ -2.1
SSN2YDR443C IPT1P38954 527 aa1.91□□□□□ -2.1
SSN2YDR443C YNL217WP40152 326 aa1.9□□□□□ -2.1
SSN2YDR443C MZM1Q03429 123 aaPredicted RBP1.9□□□□□ -2.1
SSN2YDR443C RAS2P01120 322 aaKnown RBP1.9□□□□□ -2.11
SSN2YDR443C FLX1P40464 311 aa1.9□□□□□ -2.11
SSN2YDR443C YMR090WQ04304 227 aaKnown RBP1.9□□□□□ -2.11
SSN2YDR443C SHH3Q04487 196 aa1.9□□□□□ -2.11
SSN2YDR443C SWC7Q06707 132 aa1.9□□□□□ -2.11
SSN2YDR443C IRC23Q08416 157 aa1.9□□□□□ -2.11
SSN2YDR443C CLB6P32943 380 aa1.9□□□□□ -2.11
SSN2YDR443C SWD3P38123 315 aa1.9□□□□□ -2.11
SSN2YDR443C ECM34P38728 170 aa1.9□□□□□ -2.11
SSN2YDR443C YEL067CP39978 195 aa1.9□□□□□ -2.11
SSN2YDR443C YNR077CP53758 84 aa1.9□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 373.2 ms