RNA–Protein interactions for RNA: YDR243C

PRP28, Transcript of RNA helicase in the DEAD-box family, yeastyeast

Gene PRP28, Length 1,767 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP28YDR243C PEX22P39718 180 aa3.72□□□□□ -1.81
PRP28YDR243C BXI1P48558 297 aa3.72□□□□□ -1.81
PRP28YDR243C BRP1P53194 125 aa3.72□□□□□ -1.81
PRP28YDR243C HST4P53688 370 aa3.72□□□□□ -1.81
PRP28YDR243C YNR071CP53757 342 aa3.72□□□□□ -1.81
PRP28YDR243C POP3P53833 195 aaPredicted RBP3.72□□□□□ -1.81
PRP28YDR243C ROT1Q03691 256 aa3.72□□□□□ -1.81
PRP28YDR243C IRC25Q07951 179 aa3.72□□□□□ -1.81
PRP28YDR243C MPD1Q12404 318 aaKnown RBP3.72□□□□□ -1.81
PRP28YDR243C RPS22AP0C0W1 130 aaKnown RBP3.71□□□□□ -1.81
PRP28YDR243C MRS3P10566 314 aa3.71□□□□□ -1.81
PRP28YDR243C YNL200CP40165 246 aaKnown RBP3.71□□□□□ -1.81
PRP28YDR243C YHM2Q04013 314 aa3.71□□□□□ -1.81
PRP28YDR243C MSA1Q08471 629 aa3.71□□□□□ -1.81
PRP28YDR243C SMT3Q12306 101 aaKnown RBP3.71□□□□□ -1.81
PRP28YDR243C RPS2P25443 254 aaKnown RBP3.71□□□□□ -1.82
PRP28YDR243C MTC7P32633 139 aa3.71□□□□□ -1.82
PRP28YDR243C GPI18P38211 433 aa3.71□□□□□ -1.82
PRP28YDR243C YPL073CP40323 161 aa3.71□□□□□ -1.82
PRP28YDR243C DFG10P40526 253 aa3.71□□□□□ -1.82
PRP28YDR243C VEL1P53058 206 aa3.71□□□□□ -1.82
PRP28YDR243C CRH1P53301 507 aa3.71□□□□□ -1.82
PRP28YDR243C IES4Q08561 116 aa3.71□□□□□ -1.82
PRP28YDR243C YPS3Q12303 508 aa3.71□□□□□ -1.82
PRP28YDR243C YPL038W-AQ3E7B4 63 aa3.71□□□□□ -1.82
PRP28YDR243C YCR006CP25350 157 aa3.7□□□□□ -1.82
PRP28YDR243C YKL044WP36092 106 aa3.7□□□□□ -1.82
PRP28YDR243C OM14P38325 134 aa3.7□□□□□ -1.82
PRP28YDR243C YHR140WP38842 239 aa3.7□□□□□ -1.82
PRP28YDR243C CPD1P53314 239 aa3.7□□□□□ -1.82
PRP28YDR243C YDR042CQ03205 200 aa3.7□□□□□ -1.82
PRP28YDR243C YMR175W-AQ3E766 64 aa3.7□□□□□ -1.82
PRP28YDR243C RPL18AP0CX49 186 aaKnown RBP3.69□□□□□ -1.82
PRP28YDR243C RPL18BP0CX50 186 aaKnown RBP3.69□□□□□ -1.82
PRP28YDR243C SMP1P38128 452 aa3.69□□□□□ -1.82
PRP28YDR243C YER181CP40097 107 aa3.69□□□□□ -1.82
PRP28YDR243C TDA4P47153 279 aa3.69□□□□□ -1.82
PRP28YDR243C SDS23P53172 527 aa3.69□□□□□ -1.82
PRP28YDR243C SLG1P54867 378 aa3.69□□□□□ -1.82
PRP28YDR243C PCL2P25693 308 aa3.68□□□□□ -1.82
PRP28YDR243C MBB1P39534 108 aa3.68□□□□□ -1.82
PRP28YDR243C YAR029WP39549 74 aa3.68□□□□□ -1.82
PRP28YDR243C YFR054CP43622 192 aa3.68□□□□□ -1.82
PRP28YDR243C SKI6P46948 246 aaPredicted RBP3.68□□□□□ -1.82
PRP28YDR243C YIL014C-AQ02598 104 aa3.68□□□□□ -1.82
PRP28YDR243C GAT3Q07928 141 aa3.68□□□□□ -1.82
PRP28YDR243C YHR139C-AO13536 103 aa3.68□□□□□ -1.82
PRP28YDR243C CIS3P47001 227 aa3.68□□□□□ -1.82
PRP28YDR243C TDA7P53882 636 aaPredicted RBP3.68□□□□□ -1.82
PRP28YDR243C MZM1Q03429 123 aaPredicted RBP3.68□□□□□ -1.82
PRP28YDR243C YOR387CQ08910 206 aa3.68□□□□□ -1.82
PRP28YDR243C CSR2Q12734 1121 aa3.68□□□□□ -1.82
PRP28YDR243C IGO2Q9P305 131 aa3.68□□□□□ -1.82
PRP28YDR243C QRI5P32344 111 aa3.67□□□□□ -1.82
PRP28YDR243C FZF1P32805 299 aa3.67□□□□□ -1.82
PRP28YDR243C BUD8P41698 603 aa3.67□□□□□ -1.82
PRP28YDR243C FIP1P45976 327 aa3.67□□□□□ -1.82
PRP28YDR243C VPS55P47111 140 aa3.67□□□□□ -1.82
PRP28YDR243C GLO1P50107 326 aa3.67□□□□□ -1.82
PRP28YDR243C MST27P53176 234 aa3.67□□□□□ -1.82
PRP28YDR243C YMR317WQ04893 1140 aa3.67□□□□□ -1.82
PRP28YDR243C YLR281CQ05863 155 aa3.67□□□□□ -1.82
PRP28YDR243C MCH4Q08268 501 aa3.67□□□□□ -1.82
PRP28YDR243C SPO24Q3E752 67 aa3.67□□□□□ -1.82
PRP28YDR243C YLR149CQ99296 730 aa3.67□□□□□ -1.82
PRP28YDR243C QCR9P22289 66 aa3.66□□□□□ -1.82
PRP28YDR243C SUT2Q12286 268 aa3.66□□□□□ -1.82
PRP28YDR243C YMR316C-AI2HB70 103 aa3.66□□□□□ -1.82
PRP28YDR243C Q0255P03881 472 aa3.66□□□□□ -1.82
PRP28YDR243C UBC4P15731 148 aa3.66□□□□□ -1.82
PRP28YDR243C RRT13P40042 185 aa3.66□□□□□ -1.82
PRP28YDR243C CSL4P53859 292 aaPredicted RBP3.66□□□□□ -1.82
PRP28YDR243C YDR209CQ03480 137 aa3.66□□□□□ -1.82
PRP28YDR243C FIG2P25653 1609 aa3.65□□□□□ -1.82
PRP28YDR243C AQY1P0CD91 305 aa3.65□□□□□ -1.83
PRP28YDR243C IMP1P28627 190 aa3.65□□□□□ -1.83
PRP28YDR243C ECM15P35195 104 aa3.65□□□□□ -1.83
PRP28YDR243C YIL163CP40448 117 aa3.65□□□□□ -1.83
PRP28YDR243C MIM1Q08176 113 aa3.65□□□□□ -1.83
PRP28YDR243C HTL1Q9URQ5 78 aa3.65□□□□□ -1.83
PRP28YDR243C RFA2P26754 273 aaKnown RBP3.64□□□□□ -1.83
PRP28YDR243C ERG2P32352 222 aa3.64□□□□□ -1.83
PRP28YDR243C REC114P32841 428 aa3.64□□□□□ -1.83
PRP28YDR243C GGC1P38988 300 aa3.64□□□□□ -1.83
PRP28YDR243C SHH4Q06236 168 aa3.64□□□□□ -1.83
PRP28YDR243C LSM6Q06406 86 aaKnown RBP3.64□□□□□ -1.83
PRP28YDR243C CCH1P50077 2039 aa3.64□□□□□ -1.83
PRP28YDR243C FLO9P39712 1322 aa3.64□□□□□ -1.83
PRP28YDR243C PIS1P06197 220 aaKnown RBP3.63□□□□□ -1.83
PRP28YDR243C RPS21AP0C0V8 87 aaKnown RBP3.63□□□□□ -1.83
PRP28YDR243C RPL23AP0CX41 137 aaKnown RBP3.63□□□□□ -1.83
PRP28YDR243C RPL23BP0CX42 137 aaKnown RBP3.63□□□□□ -1.83
PRP28YDR243C MRPL31P14063 131 aaPredicted RBP3.63□□□□□ -1.83
PRP28YDR243C RPL30P14120 105 aaKnown RBP3.63□□□□□ -1.83
PRP28YDR243C BET1P22804 142 aa3.63□□□□□ -1.83
PRP28YDR243C APS1P35181 156 aa3.63□□□□□ -1.83
PRP28YDR243C SRX1P36077 127 aa3.63□□□□□ -1.83
PRP28YDR243C YGR269WP40326 108 aa3.63□□□□□ -1.83
PRP28YDR243C GAT4P40569 121 aa3.63□□□□□ -1.83
PRP28YDR243C OST1P41543 476 aaKnown RBP3.63□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 25.9 ms