RNA–Protein interactions for RNA: YDR170W-A

YDR170W-A, Transcript of Retrotransposon TYA Gag gene, yeastyeast

Gene YDR170W-A, Length 1,323 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YDR170W-AYDR170W-A YNL019CP53975 284 aa1.28□□□□□ -2.2
YDR170W-AYDR170W-A RAF1Q06891 181 aa1.28□□□□□ -2.2
YDR170W-AYDR170W-A TY1B-HO13535 1793 aa1.28□□□□□ -2.2
YDR170W-AYDR170W-A TY1B-DR5P0C2I2 1755 aa1.28□□□□□ -2.2
YDR170W-AYDR170W-A TY1B-DR6P0C2I3 1755 aa1.28□□□□□ -2.2
YDR170W-AYDR170W-A TY1B-LR2P0C2I5 1755 aa1.28□□□□□ -2.2
YDR170W-AYDR170W-A TY1B-LR3P0C2I6 1755 aaKnown RBP1.28□□□□□ -2.2
YDR170W-AYDR170W-A TY1B-PR1P0C2I9 1755 aaKnown RBP1.28□□□□□ -2.2
YDR170W-AYDR170W-A TY1B-PR2P0C2J0 1756 aa1.28□□□□□ -2.2
YDR170W-AYDR170W-A TY1B-PR3P0C2J1 1755 aaKnown RBP1.28□□□□□ -2.2
YDR170W-AYDR170W-A TY1B-JR1P47098 1755 aa1.28□□□□□ -2.2
YDR170W-AYDR170W-A TY1B-ML2Q03434 1755 aaKnown RBP1.28□□□□□ -2.2
YDR170W-AYDR170W-A TY1B-ER1Q03612 1755 aa1.28□□□□□ -2.2
YDR170W-AYDR170W-A TY1B-ML1Q04711 1755 aaKnown RBP1.28□□□□□ -2.2
YDR170W-AYDR170W-A TY1B-GR2Q12269 1755 aa1.28□□□□□ -2.2
YDR170W-AYDR170W-A TY1B-OLQ12273 1755 aa1.28□□□□□ -2.2
YDR170W-AYDR170W-A TY1B-PLQ12414 1755 aaKnown RBP1.28□□□□□ -2.2
YDR170W-AYDR170W-A ECM5Q03214 1411 aa1.27□□□□□ -2.21
YDR170W-AYDR170W-A POL1P13382 1468 aa1.27□□□□□ -2.21
YDR170W-AYDR170W-A MDS3P53094 1487 aa1.27□□□□□ -2.21
YDR170W-AYDR170W-A SCC2Q04002 1493 aa1.27□□□□□ -2.21
YDR170W-AYDR170W-A TY1B-BRQ12193 1756 aa1.27□□□□□ -2.21
YDR170W-AYDR170W-A TY1B-GR3Q12316 1755 aa1.27□□□□□ -2.21
YDR170W-AYDR170W-A TY1B-ORQ92393 1755 aa1.27□□□□□ -2.21
YDR170W-AYDR170W-A RPL33AP05744 107 aaKnown RBP1.27□□□□□ -2.21
YDR170W-AYDR170W-A YOL013W-AP0C272 63 aaPredicted RBP1.27□□□□□ -2.21
YDR170W-AYDR170W-A YCR001WP25347 104 aa1.27□□□□□ -2.21
YDR170W-AYDR170W-A CYC2P38909 366 aa1.27□□□□□ -2.21
YDR170W-AYDR170W-A EMC4P53073 190 aa1.27□□□□□ -2.21
YDR170W-AYDR170W-A YOR385WQ08909 290 aa1.27□□□□□ -2.21
YDR170W-AYDR170W-A DDP1Q99321 188 aaKnown RBP1.27□□□□□ -2.21
YDR170W-AYDR170W-A RPO31P04051 1460 aa1.26□□□□□ -2.21
YDR170W-AYDR170W-A YCF1P39109 1515 aaKnown RBP1.26□□□□□ -2.21
YDR170W-AYDR170W-A RPS1AP33442 255 aaKnown RBP1.26□□□□□ -2.21
YDR170W-AYDR170W-A RPL14AP36105 138 aaKnown RBP1.26□□□□□ -2.21
YDR170W-AYDR170W-A RPL14BP38754 138 aaKnown RBP1.26□□□□□ -2.21
YDR170W-AYDR170W-A NAT5Q08689 176 aa1.26□□□□□ -2.21
YDR170W-AYDR170W-A MMS22Q06164 1454 aa1.26□□□□□ -2.21
YDR170W-AYDR170W-A STU1P38198 1513 aa1.26□□□□□ -2.21
YDR170W-AYDR170W-A SLH1P53327 1967 aaKnown RBP1.25□□□□□ -2.21
YDR170W-AYDR170W-A RKR1Q04781 1562 aa1.25□□□□□ -2.21
YDR170W-AYDR170W-A TY1B-JR2P47100 1755 aaKnown RBP1.25□□□□□ -2.21
YDR170W-AYDR170W-A TY1B-ER2Q03619 1755 aa1.25□□□□□ -2.21
YDR170W-AYDR170W-A TY1B-MR1Q04214 1755 aa1.25□□□□□ -2.21
YDR170W-AYDR170W-A TY1B-MR2Q04670 1755 aaKnown RBP1.25□□□□□ -2.21
YDR170W-AYDR170W-A TY1B-LR1Q12088 1755 aaKnown RBP1.25□□□□□ -2.21
YDR170W-AYDR170W-A TY1B-NL1Q12112 1755 aa1.25□□□□□ -2.21
YDR170W-AYDR170W-A TY1B-GR1Q12141 1755 aa1.25□□□□□ -2.21
YDR170W-AYDR170W-A TY1B-BLQ12490 1755 aa1.25□□□□□ -2.21
YDR170W-AYDR170W-A YGL014C-AP0C5N1 53 aa1.25□□□□□ -2.21
YDR170W-AYDR170W-A GIM4P40005 111 aaKnown RBP1.25□□□□□ -2.21
YDR170W-AYDR170W-A HPM1P40481 377 aa1.25□□□□□ -2.21
YDR170W-AYDR170W-A HAP2P06774 265 aa1.24□□□□□ -2.21
YDR170W-AYDR170W-A MRPL44P19956 98 aa1.24□□□□□ -2.21
YDR170W-AYDR170W-A YCR050CP25630 102 aa1.24□□□□□ -2.21
YDR170W-AYDR170W-A ACP1P32463 125 aa1.24□□□□□ -2.21
YDR170W-AYDR170W-A YGL204CP53089 101 aa1.24□□□□□ -2.21
YDR170W-AYDR170W-A YGR042WP53227 271 aa1.24□□□□□ -2.21
YDR170W-AYDR170W-A YNL122CP53921 115 aaPredicted RBP1.24□□□□□ -2.21
YDR170W-AYDR170W-A ELC1Q03071 99 aa1.24□□□□□ -2.21
YDR170W-AYDR170W-A ATP14Q12349 124 aa1.24□□□□□ -2.21
YDR170W-AYDR170W-A TOP2P06786 1428 aaKnown RBP1.24□□□□□ -2.21
YDR170W-AYDR170W-A SKI3P17883 1432 aaKnown RBP1.24□□□□□ -2.21
YDR170W-AYDR170W-A SMC4Q12267 1418 aa1.24□□□□□ -2.21
YDR170W-AYDR170W-A MYO4P32492 1471 aa1.24□□□□□ -2.21
YDR170W-AYDR170W-A BPT1P14772 1559 aa1.24□□□□□ -2.21
YDR170W-AYDR170W-A FUN14P18411 198 aa1.23□□□□□ -2.21
YDR170W-AYDR170W-A SUA7P29055 345 aaPredicted RBP1.23□□□□□ -2.21
YDR170W-AYDR170W-A SRL3P36167 246 aa1.23□□□□□ -2.21
YDR170W-AYDR170W-A SFT2P38166 215 aa1.23□□□□□ -2.21
YDR170W-AYDR170W-A RPL37BP51402 88 aaKnown RBP1.23□□□□□ -2.21
YDR170W-AYDR170W-A YGL149WP53116 101 aa1.23□□□□□ -2.21
YDR170W-AYDR170W-A YGR017WP53210 297 aa1.23□□□□□ -2.21
YDR170W-AYDR170W-A YPL067CQ02754 198 aa1.23□□□□□ -2.21
YDR170W-AYDR170W-A AIM36Q03798 255 aa1.23□□□□□ -2.21
YDR170W-AYDR170W-A UFD4P33202 1483 aa1.23□□□□□ -2.21
YDR170W-AYDR170W-A NUP170P38181 1502 aa1.23□□□□□ -2.21
YDR170W-AYDR170W-A ULS1Q08562 1619 aa1.23□□□□□ -2.21
YDR170W-AYDR170W-A RPA190P10964 1664 aaKnown RBP1.23□□□□□ -2.21
YDR170W-AYDR170W-A MLP2P40457 1679 aa1.23□□□□□ -2.21
YDR170W-AYDR170W-A RIF1P29539 1916 aa1.23□□□□□ -2.21
YDR170W-AYDR170W-A RPO21P04050 1733 aaKnown RBP1.22□□□□□ -2.21
YDR170W-AYDR170W-A ESC1Q03661 1658 aaKnown RBP1.22□□□□□ -2.21
YDR170W-AYDR170W-A CDC25P04821 1589 aa1.22□□□□□ -2.21
YDR170W-AYDR170W-A FMP49A0A023PZB3 126 aa1.22□□□□□ -2.21
YDR170W-AYDR170W-A QCR10P37299 77 aa1.22□□□□□ -2.21
YDR170W-AYDR170W-A TRS20P38334 175 aa1.22□□□□□ -2.21
YDR170W-AYDR170W-A YAL064WP39711 94 aa1.22□□□□□ -2.21
YDR170W-AYDR170W-A YMR122CQ03879 124 aa1.22□□□□□ -2.21
YDR170W-AYDR170W-A IRC21Q04772 201 aa1.22□□□□□ -2.21
YDR170W-AYDR170W-A SPC2Q04969 178 aa1.22□□□□□ -2.21
YDR170W-AYDR170W-A YOR072WQ08486 104 aa1.22□□□□□ -2.21
YDR170W-AYDR170W-A UBR1P19812 1950 aa1.22□□□□□ -2.21
YDR170W-AYDR170W-A YBT1P32386 1661 aa1.22□□□□□ -2.21
YDR170W-AYDR170W-A NTE1Q04958 1679 aa1.22□□□□□ -2.21
YDR170W-AYDR170W-A IRC20Q06554 1556 aa1.22□□□□□ -2.21
YDR170W-AYDR170W-A SNQ2P32568 1501 aaKnown RBP1.21□□□□□ -2.21
YDR170W-AYDR170W-A TY3B-GQ99315 1547 aa1.21□□□□□ -2.21
YDR170W-AYDR170W-A YER188C-AP0C0V2 99 aa1.21□□□□□ -2.22
YDR170W-AYDR170W-A TVP18Q04767 167 aa1.21□□□□□ -2.22
Retrieved 100 of 5,963 RNA–protein pairs in 46.6 ms