RNA–Protein interactions for RNA: YDR083W

RRP8, Transcript of Nucleolar S-adenosylmethionine-dependent rRNA methyltransferase, yeastyeast

Gene RRP8, Length 1,179 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRP8YDR083W YLR042CQ07990 161 aa2.15□□□□□ -2.07
RRP8YDR083W NAT5Q08689 176 aa2.15□□□□□ -2.07
RRP8YDR083W HSL1P34244 1518 aa2.15□□□□□ -2.07
RRP8YDR083W ECM31P38122 312 aa2.14□□□□□ -2.07
RRP8YDR083W YEL014CP39999 101 aa2.14□□□□□ -2.07
RRP8YDR083W RPL13BP40212 199 aaKnown RBP2.14□□□□□ -2.07
RRP8YDR083W RPL13AQ12690 199 aaPredicted RBP2.14□□□□□ -2.07
RRP8YDR083W SPP41P38904 1435 aa2.14□□□□□ -2.07
RRP8YDR083W HSP10P38910 106 aa2.13□□□□□ -2.07
RRP8YDR083W YMR252CQ04814 134 aa2.13□□□□□ -2.07
RRP8YDR083W GPI11Q06636 219 aa2.13□□□□□ -2.07
RRP8YDR083W RTR2Q12378 196 aa2.13□□□□□ -2.07
RRP8YDR083W RPS12P48589 143 aaKnown RBP2.12□□□□□ -2.07
RRP8YDR083W YGL149WP53116 101 aa2.12□□□□□ -2.07
RRP8YDR083W ERV14P53173 138 aa2.12□□□□□ -2.07
RRP8YDR083W AVO2Q04749 426 aa2.12□□□□□ -2.07
RRP8YDR083W FYV7Q12247 151 aa2.12□□□□□ -2.07
RRP8YDR083W CMC4Q3E7A9 73 aa2.12□□□□□ -2.07
RRP8YDR083W QCR8P08525 94 aa2.11□□□□□ -2.07
RRP8YDR083W SEC59P20048 519 aa2.11□□□□□ -2.07
RRP8YDR083W YGL010WP25338 174 aa2.11□□□□□ -2.07
RRP8YDR083W GSP1P32835 219 aaKnown RBP2.11□□□□□ -2.07
RRP8YDR083W YGL230CP53074 147 aa2.11□□□□□ -2.07
RRP8YDR083W YNL146C-AQ3E7Z1 64 aa2.11□□□□□ -2.07
RRP8YDR083W MHF1Q3E835 90 aa2.11□□□□□ -2.07
RRP8YDR083W TAR1Q8TGM6 124 aa2.11□□□□□ -2.07
RRP8YDR083W SWR1Q05471 1514 aa2.11□□□□□ -2.07
RRP8YDR083W SNT2P53127 1403 aa2.1□□□□□ -2.07
RRP8YDR083W FUN14P18411 198 aa2.1□□□□□ -2.07
RRP8YDR083W PRE1P22141 198 aaKnown RBP2.1□□□□□ -2.07
RRP8YDR083W HSP150P32478 413 aa2.1□□□□□ -2.07
RRP8YDR083W YKL044WP36092 106 aa2.1□□□□□ -2.07
RRP8YDR083W IPT1P38954 527 aa2.1□□□□□ -2.07
RRP8YDR083W YAR029WP39549 74 aa2.1□□□□□ -2.07
RRP8YDR083W PAM16P42949 149 aa2.1□□□□□ -2.07
RRP8YDR083W DCV1P43595 202 aa2.1□□□□□ -2.07
RRP8YDR083W YPL067CQ02754 198 aa2.1□□□□□ -2.07
RRP8YDR083W YPL225WQ08971 146 aaKnown RBP2.1□□□□□ -2.07
RRP8YDR083W YOR097CQ12274 175 aaPredicted RBP2.1□□□□□ -2.07
RRP8YDR083W YOR376W-AQ3E805 51 aa2.1□□□□□ -2.07
RRP8YDR083W PAU21P0CE86 164 aa2.09□□□□□ -2.07
RRP8YDR083W PAU22P0CE87 164 aa2.09□□□□□ -2.07
RRP8YDR083W HAP3P13434 144 aa2.09□□□□□ -2.07
RRP8YDR083W YBR242WP38331 238 aa2.09□□□□□ -2.07
RRP8YDR083W SNF11P38956 169 aa2.09□□□□□ -2.07
RRP8YDR083W GTT2Q12390 233 aa2.09□□□□□ -2.07
RRP8YDR083W UBR2Q07963 1872 aa2.09□□□□□ -2.08
RRP8YDR083W KOG1P38873 1557 aa2.08□□□□□ -2.08
RRP8YDR083W YER039C-AP0CD97 72 aa2.08□□□□□ -2.08
RRP8YDR083W YCR099CP25657 155 aa2.08□□□□□ -2.08
RRP8YDR083W SRL3P36167 246 aa2.08□□□□□ -2.08
RRP8YDR083W YEL008WP40001 126 aa2.08□□□□□ -2.08
RRP8YDR083W TDA2P40045 126 aa2.08□□□□□ -2.08
RRP8YDR083W ACC1Q00955 2233 aaKnown RBP2.07□□□□□ -2.08
RRP8YDR083W GSC2P40989 1895 aa2.07□□□□□ -2.08
RRP8YDR083W HYP2P23301 157 aaKnown RBP2.07□□□□□ -2.08
RRP8YDR083W BRP1P53194 125 aa2.07□□□□□ -2.08
RRP8YDR083W GPI19Q04082 140 aa2.07□□□□□ -2.08
RRP8YDR083W COA3Q3E7B2 85 aa2.07□□□□□ -2.08
RRP8YDR083W VAR1P02381 398 aa2.06□□□□□ -2.08
RRP8YDR083W MRPL11P36521 249 aaPredicted RBP2.06□□□□□ -2.08
RRP8YDR083W YFL065CP43539 102 aa2.06□□□□□ -2.08
RRP8YDR083W YFL051CP43552 160 aa2.06□□□□□ -2.08
RRP8YDR083W TY1B-DR4Q07793 1604 aa2.06□□□□□ -2.08
RRP8YDR083W TY1B-HO13535 1793 aa2.05□□□□□ -2.08
RRP8YDR083W FPR1P20081 114 aaKnown RBP2.05□□□□□ -2.08
RRP8YDR083W UTP11P34247 250 aaPredicted RBP2.05□□□□□ -2.08
RRP8YDR083W RPL36BO14455 100 aaKnown RBP2.04□□□□□ -2.08
RRP8YDR083W RPL36AP05745 100 aaPredicted RBP2.04□□□□□ -2.08
RRP8YDR083W ATG8P38182 117 aaRIP-Chip data2.04□□□□□ -2.08not detected
RRP8YDR083W YBR027CP38220 110 aa2.04□□□□□ -2.08
RRP8YDR083W TSC11P40061 1430 aa2.04□□□□□ -2.08
RRP8YDR083W YFR035CP43608 114 aa2.04□□□□□ -2.08
RRP8YDR083W ZEO1Q08245 113 aa2.04□□□□□ -2.08
RRP8YDR083W YCR101CP25607 182 aa2.03□□□□□ -2.08
RRP8YDR083W MRPL15P36523 253 aa2.03□□□□□ -2.08
RRP8YDR083W GNA1P43577 159 aaPredicted RBP2.03□□□□□ -2.08
RRP8YDR083W VAM10Q08474 114 aa2.03□□□□□ -2.08
RRP8YDR083W OCA6Q12454 224 aa2.03□□□□□ -2.08
RRP8YDR083W MED11Q99278 115 aa2.03□□□□□ -2.08
RRP8YDR083W YCL042WP25572 119 aa2.02□□□□□ -2.09
RRP8YDR083W RPL40AP0CH08 128 aaKnown RBP2.01□□□□□ -2.09
RRP8YDR083W RPL40BP0CH09 128 aaKnown RBP2.01□□□□□ -2.09
RRP8YDR083W YGR164WP53291 111 aa2.01□□□□□ -2.09
RRP8YDR083W SED1Q01589 338 aa2.01□□□□□ -2.09
RRP8YDR083W FIT1Q04433 528 aa2.01□□□□□ -2.09
RRP8YDR083W YLR296WQ05898 108 aa2.01□□□□□ -2.09
RRP8YDR083W HPA2Q06592 156 aa2.01□□□□□ -2.09
RRP8YDR083W YPR203WQ08994 102 aa2.01□□□□□ -2.09
RRP8YDR083W YLR365WQ7LIF2 110 aa2.01□□□□□ -2.09
RRP8YDR083W TCB3Q03640 1545 aaKnown RBP2.01□□□□□ -2.09
RRP8YDR083W TOP2P06786 1428 aaKnown RBP2□□□□□ -2.09
RRP8YDR083W TRM732Q03496 1420 aa2□□□□□ -2.09
RRP8YDR083W RPL33AP05744 107 aaKnown RBP2□□□□□ -2.09
RRP8YDR083W PFY1P07274 126 aa2□□□□□ -2.09
RRP8YDR083W YGL014C-AP0C5N1 53 aa2□□□□□ -2.09
RRP8YDR083W YHR213WP0CI67 198 aa2□□□□□ -2.09
RRP8YDR083W EMP24P32803 203 aaKnown RBP2□□□□□ -2.09
RRP8YDR083W YBR090CP38253 122 aa2□□□□□ -2.09
RRP8YDR083W YHR130CP38834 111 aa2□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 21.3 ms