RNA–Protein interactions for RNA: YDL229W

SSB1, Transcript of Cytoplasmic ATPase that is a ribosome-associated molecular chaperone, yeastyeast

Gene SSB1, Length 1,842 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSB1YDL229W OM14P38325 134 aa3.59□□□□□ -1.83
SSB1YDL229W YIL165CP40446 119 aa3.59□□□□□ -1.83
SSB1YDL229W OST1P41543 476 aaKnown RBP3.59□□□□□ -1.83
SSB1YDL229W SMD1Q02260 146 aaPredicted RBP3.59□□□□□ -1.83
SSB1YDL229W FSH2Q05015 223 aa3.59□□□□□ -1.83
SSB1YDL229W RRS1Q08746 203 aaKnown RBP3.59□□□□□ -1.83
SSB1YDL229W NDD1Q08887 554 aa3.59□□□□□ -1.83
SSB1YDL229W MIC10Q96VH5 97 aa3.59□□□□□ -1.83
SSB1YDL229W TES1P41903 349 aaKnown RBP3.58□□□□□ -1.84
SSB1YDL229W BSC1Q12140 328 aa3.58□□□□□ -1.84
SSB1YDL229W CCH1P50077 2039 aa3.58□□□□□ -1.84
SSB1YDL229W PAU24P38155 120 aa3.58□□□□□ -1.84
SSB1YDL229W SFT2P38166 215 aa3.58□□□□□ -1.84
SSB1YDL229W MED6P38782 295 aa3.58□□□□□ -1.84
SSB1YDL229W YAR068WP39564 161 aa3.58□□□□□ -1.84
SSB1YDL229W YIL169CP40442 995 aa3.58□□□□□ -1.84
SSB1YDL229W YNL234WP53857 426 aa3.58□□□□□ -1.84
SSB1YDL229W SME1Q12330 94 aaPredicted RBP3.58□□□□□ -1.84
SSB1YDL229W RNH203Q12338 110 aa3.58□□□□□ -1.84
SSB1YDL229W NAG1Q8TGN9 163 aa3.58□□□□□ -1.84
SSB1YDL229W PAU1P0CE88 120 aa3.57□□□□□ -1.84
SSB1YDL229W PAU14P0CE89 120 aa3.57□□□□□ -1.84
SSB1YDL229W PAU6P0CE90 120 aa3.57□□□□□ -1.84
SSB1YDL229W PAU18P0CE91 120 aa3.57□□□□□ -1.84
SSB1YDL229W PAU8P0CE92 120 aa3.57□□□□□ -1.84
SSB1YDL229W PAU11P0CE93 120 aa3.57□□□□□ -1.84
SSB1YDL229W BET1P22804 142 aa3.57□□□□□ -1.84
SSB1YDL229W PAU13P38725 120 aa3.57□□□□□ -1.84
SSB1YDL229W YER181CP40097 107 aa3.57□□□□□ -1.84
SSB1YDL229W BXI1P48558 297 aa3.57□□□□□ -1.84
SSB1YDL229W PAU4P53427 120 aa3.57□□□□□ -1.84
SSB1YDL229W SWT21P53873 357 aaPredicted RBP3.57□□□□□ -1.84
SSB1YDL229W CUZ1P53899 274 aa3.57□□□□□ -1.84
SSB1YDL229W PAU10Q03050 120 aa3.57□□□□□ -1.84
SSB1YDL229W YOL160WQ08321 113 aa3.57□□□□□ -1.84
SSB1YDL229W PAU20Q08322 120 aa3.57□□□□□ -1.84
SSB1YDL229W YDL009CQ12210 107 aa3.57□□□□□ -1.84
SSB1YDL229W PAU9Q3E770 120 aa3.57□□□□□ -1.84
SSB1YDL229W MAK31P23059 88 aa3.56□□□□□ -1.84
SSB1YDL229W ERG4P25340 473 aa3.56□□□□□ -1.84
SSB1YDL229W FLO1P32768 1537 aa3.56□□□□□ -1.84
SSB1YDL229W AGA2P32781 87 aa3.56□□□□□ -1.84
SSB1YDL229W YHL042WP38729 150 aa3.56□□□□□ -1.84
SSB1YDL229W RPP1P38786 293 aa3.56□□□□□ -1.84
SSB1YDL229W RRT13P40042 185 aa3.56□□□□□ -1.84
SSB1YDL229W DFG10P40526 253 aa3.56□□□□□ -1.84
SSB1YDL229W PIR5P46999 287 aa3.56□□□□□ -1.84
SSB1YDL229W CIS3P47001 227 aa3.56□□□□□ -1.84
SSB1YDL229W VPS55P47111 140 aa3.56□□□□□ -1.84
SSB1YDL229W POP3P53833 195 aaPredicted RBP3.56□□□□□ -1.84
SSB1YDL229W LEE1Q02799 301 aaKnown RBP3.56□□□□□ -1.84
SSB1YDL229W SYM1Q06563 197 aa3.56□□□□□ -1.84
SSB1YDL229W NIP7Q08962 181 aaKnown RBP3.56□□□□□ -1.84
SSB1YDL229W NCE102Q12207 173 aaRIP-Chip data3.56□□□□□ -1.84not detected
SSB1YDL229W AYT1Q12226 474 aa3.56□□□□□ -1.84
SSB1YDL229W CSR2Q12734 1121 aa3.56□□□□□ -1.84
SSB1YDL229W YKL023C-AQ2V2P3 75 aa3.56□□□□□ -1.84
SSB1YDL229W YPL038W-AQ3E7B4 63 aa3.56□□□□□ -1.84
SSB1YDL229W YHR139C-AO13536 103 aa3.56□□□□□ -1.84
SSB1YDL229W HEM2P05373 342 aa3.56□□□□□ -1.84
SSB1YDL229W YCR006CP25350 157 aa3.56□□□□□ -1.84
SSB1YDL229W IGO1P53897 168 aa3.56□□□□□ -1.84
SSB1YDL229W SLG1P54867 378 aa3.56□□□□□ -1.84
SSB1YDL229W RPL16AP26784 199 aaKnown RBP3.55□□□□□ -1.84
SSB1YDL229W MTC7P32633 139 aa3.55□□□□□ -1.84
SSB1YDL229W INM1P38710 295 aa3.55□□□□□ -1.84
SSB1YDL229W ANS1P38832 159 aa3.55□□□□□ -1.84
SSB1YDL229W YFL019CP43576 117 aa3.55□□□□□ -1.84
SSB1YDL229W TDA4P47153 279 aa3.55□□□□□ -1.84
SSB1YDL229W PAU12P53343 120 aa3.55□□□□□ -1.84
SSB1YDL229W COX12Q01519 83 aa3.55□□□□□ -1.84
SSB1YDL229W LPP1Q04396 274 aa3.55□□□□□ -1.84
SSB1YDL229W MCH4Q08268 501 aa3.55□□□□□ -1.84
SSB1YDL229W MPD1Q12404 318 aaKnown RBP3.55□□□□□ -1.84
SSB1YDL229W AHT1P29589 182 aa3.54□□□□□ -1.84
SSB1YDL229W PAU2P32612 120 aa3.54□□□□□ -1.84
SSB1YDL229W FZF1P32805 299 aa3.54□□□□□ -1.84
SSB1YDL229W SPT4P32914 102 aaPredicted RBP3.54□□□□□ -1.84
SSB1YDL229W GGC1P38988 300 aa3.54□□□□□ -1.84
SSB1YDL229W PEX17P40155 199 aa3.54□□□□□ -1.84
SSB1YDL229W PIR3Q03180 325 aa3.54□□□□□ -1.84
SSB1YDL229W MIX17Q03667 156 aa3.54□□□□□ -1.84
SSB1YDL229W EMC6Q12431 108 aa3.54□□□□□ -1.84
SSB1YDL229W YBR255C-AQ3E776 120 aa3.54□□□□□ -1.84
SSB1YDL229W CYR1P08678 2026 aaKnown RBP3.54□□□□□ -1.84
SSB1YDL229W Q0255P03881 472 aa3.54□□□□□ -1.84
SSB1YDL229W SWD3P38123 315 aa3.54□□□□□ -1.84
SSB1YDL229W YPT10P38146 199 aa3.54□□□□□ -1.84
SSB1YDL229W YNL195CP40168 261 aa3.54□□□□□ -1.84
SSB1YDL229W CDC1P40986 491 aa3.54□□□□□ -1.84
SSB1YDL229W ELP6Q04868 273 aa3.54□□□□□ -1.84
SSB1YDL229W YOR105WQ08504 108 aa3.54□□□□□ -1.84
SSB1YDL229W YLR112WQ12130 139 aa3.54□□□□□ -1.84
SSB1YDL229W YDR381C-AQ3E6R5 114 aa3.54□□□□□ -1.84
SSB1YDL229W YBR182C-AQ8TGU6 64 aa3.54□□□□□ -1.84
SSB1YDL229W MDH2P22133 377 aa3.53□□□□□ -1.84
SSB1YDL229W YBL059WP34224 193 aa3.53□□□□□ -1.84
SSB1YDL229W MRPL27P36526 146 aaPredicted RBP3.53□□□□□ -1.84
SSB1YDL229W YNL200CP40165 246 aaKnown RBP3.53□□□□□ -1.84
SSB1YDL229W SKI6P46948 246 aaPredicted RBP3.53□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 28.1 ms