RNA–Protein interactions for RNA: YDL111C

RRP42, Transcript of Exosome non-catalytic core component, yeastyeast

Gene RRP42, Length 798 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRP42YDL111C CNL1Q06333 122 aa1.88□□□□□ -2.11
RRP42YDL111C FCY1Q12178 158 aa1.88□□□□□ -2.11
RRP42YDL111C TAR1Q8TGM6 124 aa1.88□□□□□ -2.11
RRP42YDL111C DNF1P32660 1571 aa1.88□□□□□ -2.11
RRP42YDL111C RKR1Q04781 1562 aa1.88□□□□□ -2.11
RRP42YDL111C CYR1P08678 2026 aaKnown RBP1.88□□□□□ -2.11
RRP42YDL111C RPS20P38701 121 aaKnown RBP1.87□□□□□ -2.11
RRP42YDL111C LSM8P47093 109 aaKnown RBP1.87□□□□□ -2.11
RRP42YDL111C TIM8P57744 87 aa1.87□□□□□ -2.11
RRP42YDL111C COA3Q3E7B2 85 aa1.87□□□□□ -2.11
RRP42YDL111C RPO31P04051 1460 aa1.87□□□□□ -2.11
RRP42YDL111C ESC1Q03661 1658 aaKnown RBP1.86□□□□□ -2.11
RRP42YDL111C SNT2P53127 1403 aa1.86□□□□□ -2.11
RRP42YDL111C FMP49A0A023PZB3 126 aa1.86□□□□□ -2.11
RRP42YDL111C RPL14AP36105 138 aaKnown RBP1.86□□□□□ -2.11
RRP42YDL111C RPL14BP38754 138 aaKnown RBP1.86□□□□□ -2.11
RRP42YDL111C EMC4P53073 190 aa1.86□□□□□ -2.11
RRP42YDL111C YGL230CP53074 147 aa1.86□□□□□ -2.11
RRP42YDL111C DNF2Q12675 1612 aa1.86□□□□□ -2.11
RRP42YDL111C MLP1Q02455 1875 aaKnown RBP1.86□□□□□ -2.11
RRP42YDL111C TY3B-GQ99315 1547 aa1.86□□□□□ -2.11
RRP42YDL111C RPO41P13433 1351 aaKnown RBP1.85□□□□□ -2.11
RRP42YDL111C ATG2P53855 1592 aa1.85□□□□□ -2.11
RRP42YDL111C PDR11P40550 1411 aa1.85□□□□□ -2.11
RRP42YDL111C NHP6AP11632 93 aaKnown RBP1.85□□□□□ -2.11
RRP42YDL111C HYM1P32464 399 aa1.85□□□□□ -2.11
RRP42YDL111C ECM31P38122 312 aa1.85□□□□□ -2.11
RRP42YDL111C DIE2P50076 525 aa1.85□□□□□ -2.11
RRP42YDL111C YCL001W-AP87012 153 aa1.85□□□□□ -2.11
RRP42YDL111C ELC1Q03071 99 aa1.85□□□□□ -2.11
RRP42YDL111C YOR289WQ12012 251 aaPredicted RBP1.85□□□□□ -2.11
RRP42YDL111C YNL277W-AQ3E7Z0 62 aa1.85□□□□□ -2.11
RRP42YDL111C LTE1P07866 1435 aa1.84□□□□□ -2.11
RRP42YDL111C MDS3P53094 1487 aa1.84□□□□□ -2.11
RRP42YDL111C PRE1P22141 198 aaKnown RBP1.84□□□□□ -2.11
RRP42YDL111C RPS1BP23248 255 aaKnown RBP1.84□□□□□ -2.11
RRP42YDL111C YEL014CP39999 101 aa1.84□□□□□ -2.11
RRP42YDL111C SMX2P40204 77 aaKnown RBP1.84□□□□□ -2.11
RRP42YDL111C HPM1P40481 377 aa1.84□□□□□ -2.11
RRP42YDL111C RPL22BP56628 122 aaKnown RBP1.84□□□□□ -2.11
RRP42YDL111C AVO2Q04749 426 aa1.84□□□□□ -2.11
RRP42YDL111C RTR2Q12378 196 aa1.84□□□□□ -2.11
RRP42YDL111C HAP1P0CE41 1502 aa1.84□□□□□ -2.11
RRP42YDL111C RSF2P46974 1380 aa1.84□□□□□ -2.12
RRP42YDL111C YCL042WP25572 119 aa1.83□□□□□ -2.12
RRP42YDL111C COA4Q05809 96 aa1.83□□□□□ -2.12
RRP42YDL111C YPR153WQ06537 140 aa1.83□□□□□ -2.12
RRP42YDL111C HUT1Q12520 339 aa1.83□□□□□ -2.12
RRP42YDL111C CMC4Q3E7A9 73 aa1.83□□□□□ -2.12
RRP42YDL111C SNF2P22082 1703 aa1.83□□□□□ -2.12
RRP42YDL111C UBR1P19812 1950 aa1.82□□□□□ -2.12
RRP42YDL111C COX5BP00425 151 aa1.82□□□□□ -2.12
RRP42YDL111C FYV5P25585 152 aa1.82□□□□□ -2.12
RRP42YDL111C MRP49P32388 137 aa1.82□□□□□ -2.12
RRP42YDL111C MRPL15P36523 253 aa1.82□□□□□ -2.12
RRP42YDL111C TVP18Q04767 167 aa1.82□□□□□ -2.12
RRP42YDL111C RAF1Q06891 181 aa1.82□□□□□ -2.12
RRP42YDL111C KIN28P06242 306 aa1.81□□□□□ -2.12
RRP42YDL111C RPS1AP33442 255 aaKnown RBP1.81□□□□□ -2.12
RRP42YDL111C TRS20P38334 175 aa1.81□□□□□ -2.12
RRP42YDL111C SDH7Q04401 133 aa1.81□□□□□ -2.12
RRP42YDL111C SOM1Q05676 74 aa1.81□□□□□ -2.12
RRP42YDL111C GPI11Q06636 219 aa1.81□□□□□ -2.12
RRP42YDL111C YOR385WQ08909 290 aa1.81□□□□□ -2.12
RRP42YDL111C SLO1Q3E784 85 aa1.81□□□□□ -2.12
RRP42YDL111C Q0144Q9ZZW2 109 aa1.81□□□□□ -2.12
RRP42YDL111C UBR2Q07963 1872 aa1.81□□□□□ -2.12
RRP42YDL111C PDR12Q02785 1511 aa1.81□□□□□ -2.12
RRP42YDL111C CDC25P04821 1589 aa1.81□□□□□ -2.12
RRP42YDL111C ULS1Q08562 1619 aa1.8□□□□□ -2.12
RRP42YDL111C YCR050CP25630 102 aa1.8□□□□□ -2.12
RRP42YDL111C HSP150P32478 413 aa1.8□□□□□ -2.12
RRP42YDL111C YBR032WP38223 100 aa1.8□□□□□ -2.12
RRP42YDL111C IPT1P38954 527 aa1.8□□□□□ -2.12
RRP42YDL111C VMA7P39111 118 aa1.8□□□□□ -2.12
RRP42YDL111C YPR203WQ08994 102 aa1.8□□□□□ -2.12
RRP42YDL111C YHR213W-AQ8TGT4 77 aa1.8□□□□□ -2.12
RRP42YDL111C AQY2P0CD90 149 aa1.79□□□□□ -2.12
RRP42YDL111C MRPL44P19956 98 aa1.79□□□□□ -2.12
RRP42YDL111C YKR070WP36151 352 aaKnown RBP1.79□□□□□ -2.12
RRP42YDL111C PDX3P38075 228 aaKnown RBP1.79□□□□□ -2.12
RRP42YDL111C GTT1P40582 234 aa1.79□□□□□ -2.12
RRP42YDL111C PHS1P40857 217 aa1.79□□□□□ -2.12
RRP42YDL111C SFT1P43682 97 aa1.79□□□□□ -2.12
RRP42YDL111C TMA23Q03525 211 aa1.79□□□□□ -2.12
RRP42YDL111C FIT1Q04433 528 aa1.79□□□□□ -2.12
RRP42YDL111C NAT5Q08689 176 aa1.79□□□□□ -2.12
RRP42YDL111C WIP1Q2V2P8 89 aa1.79□□□□□ -2.12
RRP42YDL111C YCL001W-BQ96VH2 84 aa1.79□□□□□ -2.12
RRP42YDL111C VMR1P38735 1592 aa1.79□□□□□ -2.12
RRP42YDL111C USO1P25386 1790 aa1.78□□□□□ -2.12
RRP42YDL111C IML1P47170 1584 aa1.78□□□□□ -2.12
RRP42YDL111C VTH1P40438 1549 aa1.78□□□□□ -2.12
RRP42YDL111C VTH2P40890 1549 aa1.78□□□□□ -2.12
RRP42YDL111C HYP2P23301 157 aaKnown RBP1.78□□□□□ -2.12
RRP42YDL111C YAL064WP39711 94 aa1.78□□□□□ -2.12
RRP42YDL111C NHP10Q03435 203 aa1.78□□□□□ -2.12
RRP42YDL111C ZEO1Q08245 113 aa1.78□□□□□ -2.12
RRP42YDL111C GTT2Q12390 233 aa1.78□□□□□ -2.12
RRP42YDL111C MHF1Q3E835 90 aa1.78□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 25.5 ms