RNA–Protein interactions for RNA: YBR278W

DPB3, Transcript of Third-largest subunit of DNA polymerase II (DNA polymerase epsilon), yeastyeast

Gene DPB3, Length 606 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DPB3YBR278W RAD50P12753 1312 aa1.46□□□□□ -2.18
DPB3YBR278W FUN14P18411 198 aa1.46□□□□□ -2.18
DPB3YBR278W MRPL44P19956 98 aa1.46□□□□□ -2.18
DPB3YBR278W MRP49P32388 137 aa1.46□□□□□ -2.18
DPB3YBR278W QCR10P37299 77 aa1.46□□□□□ -2.18
DPB3YBR278W YAR064WP39563 99 aa1.46□□□□□ -2.18
DPB3YBR278W PHS1P40857 217 aa1.46□□□□□ -2.18
DPB3YBR278W SFT1P43682 97 aa1.46□□□□□ -2.18
DPB3YBR278W SDH7Q04401 133 aa1.46□□□□□ -2.18
DPB3YBR278W RIF1P29539 1916 aa1.45□□□□□ -2.18
DPB3YBR278W YGL014C-AP0C5N1 53 aa1.45□□□□□ -2.18
DPB3YBR278W SFT2P38166 215 aa1.45□□□□□ -2.18
DPB3YBR278W HUA1P40325 198 aa1.45□□□□□ -2.18
DPB3YBR278W YGL149WP53116 101 aa1.45□□□□□ -2.18
DPB3YBR278W YPL067CQ02754 198 aa1.45□□□□□ -2.18
DPB3YBR278W NKP2Q06162 153 aa1.45□□□□□ -2.18
DPB3YBR278W CCW12Q12127 133 aa1.45□□□□□ -2.18
DPB3YBR278W BRP1P53194 125 aa1.44□□□□□ -2.18
DPB3YBR278W MYO2P19524 1574 aaKnown RBP1.42□□□□□ -2.18
DPB3YBR278W RPL40AP0CH08 128 aaKnown RBP1.42□□□□□ -2.18
DPB3YBR278W RPL40BP0CH09 128 aaKnown RBP1.42□□□□□ -2.18
DPB3YBR278W NMT1P14743 455 aa1.42□□□□□ -2.18
DPB3YBR278W YIL102CP40488 101 aa1.42□□□□□ -2.18
DPB3YBR278W LCL2Q08045 131 aa1.42□□□□□ -2.18
DPB3YBR278W SLO1Q3E784 85 aa1.42□□□□□ -2.18
DPB3YBR278W YOL013W-AP0C272 63 aaPredicted RBP1.41□□□□□ -2.18
DPB3YBR278W PAU21P0CE86 164 aa1.41□□□□□ -2.18
DPB3YBR278W PAU22P0CE87 164 aa1.41□□□□□ -2.18
DPB3YBR278W ANB1P19211 157 aa1.41□□□□□ -2.18
DPB3YBR278W UTP11P34247 250 aaPredicted RBP1.41□□□□□ -2.18
DPB3YBR278W GAT4P40569 121 aa1.41□□□□□ -2.18
DPB3YBR278W SAE3P89114 91 aa1.41□□□□□ -2.18
DPB3YBR278W DNA2P38859 1522 aa1.4□□□□□ -2.18
DPB3YBR278W KOG1P38873 1557 aa1.4□□□□□ -2.19
DPB3YBR278W YHR213WP0CI67 198 aa1.4□□□□□ -2.19
DPB3YBR278W HSP10P38910 106 aa1.4□□□□□ -2.19
DPB3YBR278W YMR122CQ03879 124 aa1.4□□□□□ -2.19
DPB3YBR278W PRM3Q08931 133 aa1.4□□□□□ -2.19
DPB3YBR278W YLR099W-AQ3E798 87 aa1.4□□□□□ -2.19
DPB3YBR278W KTI11Q3E840 82 aa1.4□□□□□ -2.19
DPB3YBR278W HAP2P06774 265 aa1.39□□□□□ -2.19
DPB3YBR278W HAP3P13434 144 aa1.39□□□□□ -2.19
DPB3YBR278W YCR001WP25347 104 aa1.39□□□□□ -2.19
DPB3YBR278W SRL3P36167 246 aa1.39□□□□□ -2.19
DPB3YBR278W VMA7P39111 118 aa1.39□□□□□ -2.19
DPB3YBR278W LST8P41318 303 aa1.39□□□□□ -2.19
DPB3YBR278W MPC1P53157 130 aaKnown RBP1.39□□□□□ -2.19
DPB3YBR278W YNL122CP53921 115 aaPredicted RBP1.39□□□□□ -2.19
DPB3YBR278W YLR118CQ12354 227 aa1.39□□□□□ -2.19
DPB3YBR278W GTT2Q12390 233 aa1.39□□□□□ -2.19
DPB3YBR278W YOR376W-AQ3E805 51 aa1.39□□□□□ -2.19
DPB3YBR278W MRPL11P36521 249 aaPredicted RBP1.38□□□□□ -2.19
DPB3YBR278W YLR296WQ05898 108 aa1.38□□□□□ -2.19
DPB3YBR278W FRQ1Q06389 190 aa1.38□□□□□ -2.19
DPB3YBR278W WIP1Q2V2P8 89 aa1.38□□□□□ -2.19
DPB3YBR278W TRM732Q03496 1420 aa1.38□□□□□ -2.19
DPB3YBR278W RPL37AP49166 88 aaKnown RBP1.37□□□□□ -2.19
DPB3YBR278W ERV14P53173 138 aa1.37□□□□□ -2.19
DPB3YBR278W IRC21Q04772 201 aa1.37□□□□□ -2.19
DPB3YBR278W YOR072WQ08486 104 aa1.37□□□□□ -2.19
DPB3YBR278W SNT2P53127 1403 aa1.37□□□□□ -2.19
DPB3YBR278W RTC6O14464 93 aa1.36□□□□□ -2.19
DPB3YBR278W SEC59P20048 519 aa1.36□□□□□ -2.19
DPB3YBR278W UGX2P32772 223 aa1.36□□□□□ -2.19
DPB3YBR278W AIM4P38305 123 aaPredicted RBP1.36□□□□□ -2.19
DPB3YBR278W AIM11P87275 137 aa1.36□□□□□ -2.19
DPB3YBR278W RPO41P13433 1351 aaKnown RBP1.35□□□□□ -2.19
DPB3YBR278W ROM2P51862 1356 aaKnown RBP1.35□□□□□ -2.19
DPB3YBR278W YKL044WP36092 106 aa1.35□□□□□ -2.19
DPB3YBR278W AIM18P38884 321 aa1.35□□□□□ -2.19
DPB3YBR278W COA4Q05809 96 aa1.35□□□□□ -2.19
DPB3YBR278W YJL009WP47078 108 aa1.34□□□□□ -2.19
DPB3YBR278W ECM5Q03214 1411 aa1.33□□□□□ -2.2
DPB3YBR278W PFY1P07274 126 aa1.33□□□□□ -2.2
DPB3YBR278W RPS22AP0C0W1 130 aaKnown RBP1.33□□□□□ -2.2
DPB3YBR278W GSP1P32835 219 aaKnown RBP1.33□□□□□ -2.2
DPB3YBR278W APS2Q00381 147 aa1.33□□□□□ -2.2
DPB3YBR278W MGR2Q02889 113 aa1.33□□□□□ -2.2
DPB3YBR278W AIM36Q03798 255 aa1.33□□□□□ -2.2
DPB3YBR278W SPC24Q04477 213 aa1.33□□□□□ -2.2
DPB3YBR278W RPS22BQ3E7Y3 130 aaKnown RBP1.33□□□□□ -2.2
DPB3YBR278W SWR1Q05471 1514 aa1.32□□□□□ -2.2
DPB3YBR278W ADK1P07170 222 aaKnown RBP1.32□□□□□ -2.2
DPB3YBR278W RPB11P38902 120 aa1.32□□□□□ -2.2
DPB3YBR278W SNF11P38956 169 aa1.32□□□□□ -2.2
DPB3YBR278W GPI19Q04082 140 aa1.32□□□□□ -2.2
DPB3YBR278W LDB18Q07887 179 aa1.32□□□□□ -2.2
DPB3YBR278W SLH1P53327 1967 aaKnown RBP1.32□□□□□ -2.2
DPB3YBR278W RPL36BO14455 100 aaKnown RBP1.31□□□□□ -2.2
DPB3YBR278W RPL36AP05745 100 aaPredicted RBP1.31□□□□□ -2.2
DPB3YBR278W HHY1P39982 102 aa1.3□□□□□ -2.2
DPB3YBR278W HPA2Q06592 156 aa1.3□□□□□ -2.2
DPB3YBR278W FCF2Q12035 217 aaPredicted RBP1.3□□□□□ -2.2
DPB3YBR278W YIR021W-AQ3E739 70 aa1.3□□□□□ -2.2
DPB3YBR278W YSF3P0C074 85 aaPredicted RBP1.29□□□□□ -2.2
DPB3YBR278W YAR029WP39549 74 aa1.29□□□□□ -2.2
DPB3YBR278W TDA2P40045 126 aa1.29□□□□□ -2.2
DPB3YBR278W YLR194CQ05777 254 aa1.29□□□□□ -2.2
DPB3YBR278W YHR213W-BQ8TGK1 99 aa1.29□□□□□ -2.2
DPB3YBR278W YBR013CP38215 129 aa1.28□□□□□ -2.2
Retrieved 100 of 5,963 RNA–protein pairs in 32.2 ms