RNA–Protein interactions for RNA: YBR217W

ATG12, Transcript of Ubiquitin-like modifier involved in autophagy and the Cvt pathway, yeast

Gene ATG12, Length 561 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ATG12	YBR217W	HAL1	Q01766	294 aa		4.26	□□□□□ -1.73
ATG12	YBR217W	NAT3	Q06504	195 aa		4.26	□□□□□ -1.73
ATG12	YBR217W	VMA16	P23968	213 aa		4.25	□□□□□ -1.73
ATG12	YBR217W	LDS1	P31379	325 aa		4.25	□□□□□ -1.73
ATG12	YBR217W	VHS2	P40463	436 aa		4.25	□□□□□ -1.73
ATG12	YBR217W	PHS1	P40857	217 aa		4.25	□□□□□ -1.73
ATG12	YBR217W	YFR045W	P43617	309 aa		4.25	□□□□□ -1.73
ATG12	YBR217W	YGL185C	P53100	379 aa		4.25	□□□□□ -1.73
ATG12	YBR217W	SGF11	Q03067	99 aa		4.25	□□□□□ -1.73
ATG12	YBR217W	SNO1	Q03144	224 aa		4.25	□□□□□ -1.73
ATG12	YBR217W	VAM10	Q08474	114 aa		4.25	□□□□□ -1.73
ATG12	YBR217W	YDR215C	Q12240	137 aa		4.25	□□□□□ -1.73
ATG12	YBR217W	TMA17	Q12513	150 aa		4.25	□□□□□ -1.73
ATG12	YBR217W	YLR342W-A	Q3E810	57 aa		4.25	□□□□□ -1.73
ATG12	YBR217W	POF1	P25576	258 aa		4.24	□□□□□ -1.73
ATG12	YBR217W	SRP21	P32342	167 aa		4.24	□□□□□ -1.73
ATG12	YBR217W	MRPL4	P36517	319 aa		4.24	□□□□□ -1.73
ATG12	YBR217W	BNS1	P50084	137 aa		4.24	□□□□□ -1.73
ATG12	YBR217W	ATP19	P81451	68 aa		4.24	□□□□□ -1.73
ATG12	YBR217W	YOR105W	Q08504	108 aa		4.24	□□□□□ -1.73
ATG12	YBR217W	TIR1	P10863	254 aa		4.23	□□□□□ -1.73
ATG12	YBR217W	SEC59	P20048	519 aa		4.23	□□□□□ -1.73
ATG12	YBR217W	SRP14	P38985	146 aa		4.23	□□□□□ -1.73
ATG12	YBR217W	RRT13	P40042	185 aa		4.23	□□□□□ -1.73
ATG12	YBR217W	PGD1	P40356	397 aa		4.23	□□□□□ -1.73
ATG12	YBR217W	YIL024C	P40543	189 aa		4.23	□□□□□ -1.73
ATG12	YBR217W	KEG1	P43614	200 aa		4.23	□□□□□ -1.73
ATG12	YBR217W	YDL183C	P48569	320 aa		4.23	□□□□□ -1.73
ATG12	YBR217W	SMT3	Q12306	101 aa	Known RBP	4.23	□□□□□ -1.73
ATG12	YBR217W	TIM22	Q12328	207 aa		4.23	□□□□□ -1.73
ATG12	YBR217W	YCL001W-B	Q96VH2	84 aa		4.23	□□□□□ -1.73
ATG12	YBR217W	FMP49	A0A023PZB3	126 aa		4.22	□□□□□ -1.73
ATG12	YBR217W	LAC1	P28496	418 aa		4.22	□□□□□ -1.73
ATG12	YBR217W	AGA1	P32323	725 aa		4.22	□□□□□ -1.73
ATG12	YBR217W	NTF2	P33331	125 aa	Known RBP	4.22	□□□□□ -1.73
ATG12	YBR217W	DIA1	P54005	336 aa		4.22	□□□□□ -1.73
ATG12	YBR217W	UTP23	Q12339	254 aa	Known RBP	4.22	□□□□□ -1.73
ATG12	YBR217W	DCN1	Q12395	269 aa		4.22	□□□□□ -1.73
ATG12	YBR217W	YBR200W-A	Q3E755	54 aa		4.22	□□□□□ -1.73
ATG12	YBR217W	YCR075W-A	Q3E830	75 aa		4.22	□□□□□ -1.73
ATG12	YBR217W	RPL12A	P0CX53	165 aa	Known RBP	4.21	□□□□□ -1.74
ATG12	YBR217W	RPL12B	P0CX54	165 aa		4.21	□□□□□ -1.74
ATG12	YBR217W	RPL16B	P26785	198 aa	Known RBP	4.21	□□□□□ -1.74
ATG12	YBR217W	QRI5	P32344	111 aa		4.21	□□□□□ -1.74
ATG12	YBR217W	YPR053C	Q6Q5F3	151 aa		4.21	□□□□□ -1.74
ATG12	YBR217W	MRPL31	P14063	131 aa	Predicted RBP	4.2	□□□□□ -1.74
ATG12	YBR217W	MRPS9	P38120	278 aa		4.2	□□□□□ -1.74
ATG12	YBR217W	YPS5	P53057	165 aa		4.2	□□□□□ -1.74
ATG12	YBR217W	BRP1	P53194	125 aa		4.2	□□□□□ -1.74
ATG12	YBR217W	YGR017W	P53210	297 aa		4.2	□□□□□ -1.74
ATG12	YBR217W	YDR366C	P87287	132 aa		4.2	□□□□□ -1.74
ATG12	YBR217W	UPS3	Q04006	179 aa		4.2	□□□□□ -1.74
ATG12	YBR217W	CUP2	P15315	225 aa		4.19	□□□□□ -1.74
ATG12	YBR217W	RPB11	P38902	120 aa		4.19	□□□□□ -1.74
ATG12	YBR217W	SIT1	P39980	628 aa		4.19	□□□□□ -1.74
ATG12	YBR217W	RPR2	P40571	144 aa		4.19	□□□□□ -1.74
ATG12	YBR217W	COX16	P47081	118 aa		4.19	□□□□□ -1.74
ATG12	YBR217W	GIM5	Q04493	163 aa		4.19	□□□□□ -1.74
ATG12	YBR217W	YBR126W-A	Q8TGU7	68 aa		4.19	□□□□□ -1.74
ATG12	YBR217W	ADH3	P07246	375 aa	Known RBP	4.18	□□□□□ -1.74
ATG12	YBR217W	TY1A-LR4	P0C2I8	440 aa	Known RBP	4.18	□□□□□ -1.74
ATG12	YBR217W	TY1A-DR6	P0CX70	440 aa		4.18	□□□□□ -1.74
ATG12	YBR217W	TY1A-ER1	P0CX71	440 aa		4.18	□□□□□ -1.74
ATG12	YBR217W	TY1A-LR2	P0CX72	440 aa		4.18	□□□□□ -1.74
ATG12	YBR217W	TY1A-PL	P0CX73	440 aa		4.18	□□□□□ -1.74
ATG12	YBR217W	TY1A-JR1	P0CX74	440 aa		4.18	□□□□□ -1.74
ATG12	YBR217W	TY1A-LR3	P0CX75	440 aa		4.18	□□□□□ -1.74
ATG12	YBR217W	TY1A-ML2	P0CX76	440 aa		4.18	□□□□□ -1.74
ATG12	YBR217W	YGL010W	P25338	174 aa		4.18	□□□□□ -1.74
ATG12	YBR217W	MRPL28	P36527	147 aa		4.18	□□□□□ -1.74
ATG12	YBR217W	YNL217W	P40152	326 aa		4.18	□□□□□ -1.74
ATG12	YBR217W	MOG1	P47123	218 aa		4.18	□□□□□ -1.74
ATG12	YBR217W	YGR026W	P53217	278 aa		4.18	□□□□□ -1.74
ATG12	YBR217W	TIM21	P53220	239 aa		4.18	□□□□□ -1.74
ATG12	YBR217W	AIM34	Q03673	198 aa		4.18	□□□□□ -1.74
ATG12	YBR217W	CSM4	Q08955	156 aa		4.18	□□□□□ -1.74
ATG12	YBR217W	TY1A-GR1	Q12085	440 aa		4.18	□□□□□ -1.74
ATG12	YBR217W	TY1A-PR3	Q6Q5H1	440 aa	Known RBP	4.18	□□□□□ -1.74
ATG12	YBR217W	TY1A-OL	Q92392	440 aa	Known RBP	4.18	□□□□□ -1.74
ATG12	YBR217W	YPT53	P36019	220 aa		4.17	□□□□□ -1.74
ATG12	YBR217W	PAM17	P36147	197 aa		4.17	□□□□□ -1.74
ATG12	YBR217W	MIX23	P38162	196 aa		4.17	□□□□□ -1.74
ATG12	YBR217W	YHR140W	P38842	239 aa		4.17	□□□□□ -1.74
ATG12	YBR217W	HSP10	P38910	106 aa		4.17	□□□□□ -1.74
ATG12	YBR217W	KRE9	P39005	276 aa		4.17	□□□□□ -1.74
ATG12	YBR217W	VMA21	P41806	77 aa		4.17	□□□□□ -1.74
ATG12	YBR217W	YCH1	P42937	148 aa		4.17	□□□□□ -1.74
ATG12	YBR217W	ATP23	P53722	227 aa		4.17	□□□□□ -1.74
ATG12	YBR217W	DXO1	Q06349	442 aa		4.17	□□□□□ -1.74
ATG12	YBR217W	YNR034W-A	Q3E841	98 aa		4.17	□□□□□ -1.74
ATG12	YBR217W	ELF1	P36053	145 aa		4.16	□□□□□ -1.74
ATG12	YBR217W	DAD2	P36162	133 aa		4.16	□□□□□ -1.74
ATG12	YBR217W	ATG8	P38182	117 aa	RIP-Chip data	4.16	□□□□□ -1.74	not detected
ATG12	YBR217W	THG1	P53215	237 aa	Known RBP	4.16	□□□□□ -1.74
ATG12	YBR217W	YLR042C	Q07990	161 aa		4.16	□□□□□ -1.74
ATG12	YBR217W	YGR240C-A	Q3E786	66 aa		4.16	□□□□□ -1.74
ATG12	YBR217W	HMRA1	P0CY11	126 aa		4.15	□□□□□ -1.75
ATG12	YBR217W	NHP6A	P11632	93 aa	Known RBP	4.15	□□□□□ -1.75
ATG12	YBR217W	CNB1	P25296	175 aa		4.15	□□□□□ -1.75
ATG12	YBR217W	YCR023C	P25351	611 aa		4.15	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 43.5 ms