RNA–Protein interactions for RNA: YAL002W

VPS8, Transcript of Membrane-binding component of the CORVET complex, yeastyeast

Gene VPS8, Length 3,825 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS8YAL002W OCA6Q12454 224 aa1.53□□□□□ -2.16
VPS8YAL002W YKL068W-AQ3E826 78 aa1.53□□□□□ -2.16
VPS8YAL002W PHO88P38264 188 aaPredicted RBP1.53□□□□□ -2.16
VPS8YAL002W CTR2P38865 189 aa1.53□□□□□ -2.16
VPS8YAL002W PHS1P40857 217 aa1.53□□□□□ -2.16
VPS8YAL002W ECO1P43605 281 aa1.53□□□□□ -2.16
VPS8YAL002W MEU1Q07938 337 aaKnown RBP RIP-Chip data1.53□□□□□ -2.16not detected
VPS8YAL002W SEC16P48415 2195 aaKnown RBP1.53□□□□□ -2.16
VPS8YAL002W MRPL15P36523 253 aa1.53□□□□□ -2.17
VPS8YAL002W YEL028WP39989 153 aa1.53□□□□□ -2.17
VPS8YAL002W SPC25P40014 221 aa1.53□□□□□ -2.17
VPS8YAL002W YER135CP40082 130 aa1.53□□□□□ -2.17
VPS8YAL002W RIO2P40160 425 aaKnown RBP1.53□□□□□ -2.17
VPS8YAL002W YGL230CP53074 147 aa1.53□□□□□ -2.17
VPS8YAL002W HAP2P06774 265 aa1.52□□□□□ -2.17
VPS8YAL002W NOP1P15646 327 aaKnown RBP1.52□□□□□ -2.17
VPS8YAL002W MRS4P23500 304 aa1.52□□□□□ -2.17
VPS8YAL002W MPM1P40364 252 aa1.52□□□□□ -2.17
VPS8YAL002W SBH1P52870 82 aa1.52□□□□□ -2.17
VPS8YAL002W YNR064CP53750 290 aa1.52□□□□□ -2.17
VPS8YAL002W YDR274CP87283 123 aa1.52□□□□□ -2.17
VPS8YAL002W SHH3Q04487 196 aa1.52□□□□□ -2.17
VPS8YAL002W BRR2P32639 2163 aaKnown RBP1.52□□□□□ -2.17
VPS8YAL002W POR1P04840 283 aaKnown RBP1.52□□□□□ -2.17
VPS8YAL002W HYP2P23301 157 aaKnown RBP1.52□□□□□ -2.17
VPS8YAL002W YAR029WP39549 74 aa1.52□□□□□ -2.17
VPS8YAL002W YEL073CP39974 107 aa1.52□□□□□ -2.17
VPS8YAL002W SMD3P43321 101 aaKnown RBP1.52□□□□□ -2.17
VPS8YAL002W YFR045WP43617 309 aa1.52□□□□□ -2.17
VPS8YAL002W SPG1P50088 95 aa1.52□□□□□ -2.17
VPS8YAL002W RRT7Q07829 113 aa1.52□□□□□ -2.17
VPS8YAL002W ATG10Q07879 167 aa1.52□□□□□ -2.17
VPS8YAL002W SCS22Q6Q595 175 aa1.52□□□□□ -2.17
VPS8YAL002W RAS2P01120 322 aaKnown RBP1.52□□□□□ -2.17
VPS8YAL002W YCR050CP25630 102 aa1.52□□□□□ -2.17
VPS8YAL002W AIM18P38884 321 aa1.52□□□□□ -2.17
VPS8YAL002W GAA1P39012 614 aa1.52□□□□□ -2.17
VPS8YAL002W CUP9P41817 306 aa1.52□□□□□ -2.17
VPS8YAL002W DIE2P50076 525 aa1.52□□□□□ -2.17
VPS8YAL002W MRPS16Q02608 121 aa1.52□□□□□ -2.17
VPS8YAL002W YMR295CQ03559 197 aa1.52□□□□□ -2.17
VPS8YAL002W YOR381W-AQ3E804 55 aa1.52□□□□□ -2.17
VPS8YAL002W SEC59P20048 519 aa1.51□□□□□ -2.17
VPS8YAL002W RRT1P38192 103 aa1.51□□□□□ -2.17
VPS8YAL002W DOC1P53068 250 aa1.51□□□□□ -2.17
VPS8YAL002W MPC3P53311 146 aa1.51□□□□□ -2.17
VPS8YAL002W FYV12Q08559 129 aa1.51□□□□□ -2.17
VPS8YAL002W SAS5Q99314 248 aa1.51□□□□□ -2.17
VPS8YAL002W RAD10P06838 210 aa1.51□□□□□ -2.17
VPS8YAL002W UTH1P36135 365 aa1.51□□□□□ -2.17
VPS8YAL002W SFT2P38166 215 aa1.51□□□□□ -2.17
VPS8YAL002W LSM8P47093 109 aaKnown RBP1.51□□□□□ -2.17
VPS8YAL002W GRX5Q02784 150 aa1.51□□□□□ -2.17
VPS8YAL002W LIP1Q03579 150 aa1.51□□□□□ -2.17
VPS8YAL002W YOR268CQ08734 132 aa1.51□□□□□ -2.17
VPS8YAL002W YPR063CQ12160 140 aa1.51□□□□□ -2.17
VPS8YAL002W MDH2P22133 377 aa1.51□□□□□ -2.17
VPS8YAL002W MYO1P08964 1928 aa1.5□□□□□ -2.17
VPS8YAL002W YBR056W-AI2HB52 66 aa1.5□□□□□ -2.17
VPS8YAL002W MSW1P04803 379 aa1.5□□□□□ -2.17
VPS8YAL002W YGL041W-AP0C5N3 154 aa1.5□□□□□ -2.17
VPS8YAL002W YOL162WP0CF19 215 aa1.5□□□□□ -2.17
VPS8YAL002W PAM16P42949 149 aa1.5□□□□□ -2.17
VPS8YAL002W GNA1P43577 159 aaPredicted RBP1.5□□□□□ -2.17
VPS8YAL002W UPS1Q05776 175 aa1.5□□□□□ -2.17
VPS8YAL002W MID2P36027 376 aa1.5□□□□□ -2.17
VPS8YAL002W YBR090CP38253 122 aa1.5□□□□□ -2.17
VPS8YAL002W YEA6P39953 335 aa1.5□□□□□ -2.17
VPS8YAL002W YNL217WP40152 326 aa1.5□□□□□ -2.17
VPS8YAL002W BAT2P47176 376 aaKnown RBP1.5□□□□□ -2.17
VPS8YAL002W YMR252CQ04814 134 aa1.5□□□□□ -2.17
VPS8YAL002W TMA19P35691 167 aaKnown RBP1.5□□□□□ -2.17
VPS8YAL002W YAL064WP39711 94 aa1.5□□□□□ -2.17
VPS8YAL002W FLX1P40464 311 aa1.5□□□□□ -2.17
VPS8YAL002W THG1P53215 237 aaKnown RBP1.5□□□□□ -2.17
VPS8YAL002W HAL1Q01766 294 aa1.5□□□□□ -2.17
VPS8YAL002W PIN3Q06449 215 aa1.5□□□□□ -2.17
VPS8YAL002W YCL042WP25572 119 aa1.49□□□□□ -2.17
VPS8YAL002W SDH4P37298 181 aa1.49□□□□□ -2.17
VPS8YAL002W YIR035CP40579 254 aa1.49□□□□□ -2.17
VPS8YAL002W YPI1P43587 155 aa1.49□□□□□ -2.17
VPS8YAL002W MPC1P53157 130 aaKnown RBP1.49□□□□□ -2.17
VPS8YAL002W ATP19P81451 68 aa1.49□□□□□ -2.17
VPS8YAL002W NHP10Q03435 203 aa1.49□□□□□ -2.17
VPS8YAL002W CSI2Q08054 341 aa1.49□□□□□ -2.17
VPS8YAL002W YOR097CQ12274 175 aaPredicted RBP1.49□□□□□ -2.17
VPS8YAL002W RPS19AP07280 144 aaKnown RBP1.49□□□□□ -2.17
VPS8YAL002W RPS19BP07281 144 aaPredicted RBP1.49□□□□□ -2.17
VPS8YAL002W YHR032W-AP0C5N6 59 aa1.49□□□□□ -2.17
VPS8YAL002W GAT4P40569 121 aa1.49□□□□□ -2.17
VPS8YAL002W NSE4P43124 402 aa1.49□□□□□ -2.17
VPS8YAL002W YMR230W-AQ3E7B5 62 aa1.49□□□□□ -2.17
VPS8YAL002W YHL042WP38729 150 aa1.49□□□□□ -2.17
VPS8YAL002W YHR180WP38868 163 aa1.49□□□□□ -2.17
VPS8YAL002W YOR376W-AQ3E805 51 aa1.49□□□□□ -2.17
VPS8YAL002W ATG40Q99325 256 aa1.49□□□□□ -2.17
VPS8YAL002W INO4P13902 151 aa1.48□□□□□ -2.17
VPS8YAL002W YET1P35723 206 aa1.48□□□□□ -2.17
VPS8YAL002W TDA2P40045 126 aa1.48□□□□□ -2.17
VPS8YAL002W SAY1P53324 424 aa1.48□□□□□ -2.17
Retrieved 100 of 5,963 RNA–protein pairs in 328.9 ms