RNA–Protein interactions for RNA: ENST00000439955.1

AC009404.1-202, humanhuman

TSL 3 BASIC

Gene AC009404.1, Length 968 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009404.1-202ENST00000439955 SCARA3Q6AZY7 606 aa12.49□□□□□ -0.41
AC009404.1-202ENST00000439955 RBBP8NLQ8NC74 664 aaPredicted RBP12.49□□□□□ -0.41
AC009404.1-202ENST00000439955 SLC30A5Q8TAD4 765 aa12.49□□□□□ -0.41
AC009404.1-202ENST00000439955 OLIG1Q8TAK6 271 aa12.49□□□□□ -0.41
AC009404.1-202ENST00000439955 URGCPQ8TCY9 931 aa12.49□□□□□ -0.41
AC009404.1-202ENST00000439955 CDCA3Q99618 268 aaPredicted RBP12.49□□□□□ -0.41
AC009404.1-202ENST00000439955 AGPAT1Q99943 283 aa12.49□□□□□ -0.41
AC009404.1-202ENST00000439955 DESI2Q9BSY9 194 aa12.49□□□□□ -0.41
AC009404.1-202ENST00000439955 CISHQ9NSE2 258 aa12.49□□□□□ -0.41
AC009404.1-202ENST00000439955 NXF1Q9UBU9 619 aaKnown RBP12.49□□□□□ -0.41
AC009404.1-202ENST00000439955 NOCTQ9UK39 431 aaKnown RBP12.49□□□□□ -0.41
AC009404.1-202ENST00000439955 NENFQ9UMX5 172 aa12.49□□□□□ -0.41
AC009404.1-202ENST00000439955 PCDHB4Q9Y5E5 795 aa12.49□□□□□ -0.41
AC009404.1-202ENST00000439955 DNAH14Q0VDD8 3507 aa12.48□□□□□ -0.41
AC009404.1-202ENST00000439955 TBKBP1A7MCY6 615 aa12.48□□□□□ -0.41
AC009404.1-202ENST00000439955 FSCN2O14926 492 aa12.48□□□□□ -0.41
AC009404.1-202ENST00000439955 TUBB4AP04350 444 aa12.48□□□□□ -0.41
AC009404.1-202ENST00000439955 PAEPP09466 180 aa12.48□□□□□ -0.41
AC009404.1-202ENST00000439955 VAV2P52735 878 aa12.48□□□□□ -0.41
AC009404.1-202ENST00000439955 UBE3AQ05086 875 aa12.48□□□□□ -0.41
AC009404.1-202ENST00000439955 ANGPT1Q15389 498 aa12.48□□□□□ -0.41
AC009404.1-202ENST00000439955 PPP1R2P3Q6NXS1 205 aa12.48□□□□□ -0.41
AC009404.1-202ENST00000439955 TMEM270Q6UE05 265 aa12.48□□□□□ -0.41
AC009404.1-202ENST00000439955 DPH6Q7L8W6 267 aa12.48□□□□□ -0.41
AC009404.1-202ENST00000439955 LIMS2Q7Z4I7 341 aa12.48□□□□□ -0.41
AC009404.1-202ENST00000439955 NOP9Q86U38 636 aaKnown RBP12.48□□□□□ -0.41
AC009404.1-202ENST00000439955 REXO1L1PQ8IX06 675 aa12.48□□□□□ -0.41
AC009404.1-202ENST00000439955 PIP4P2Q8N4L2 257 aa12.48□□□□□ -0.41
AC009404.1-202ENST00000439955 RNF169Q8NCN4 708 aa12.48□□□□□ -0.41
AC009404.1-202ENST00000439955 ACRBPQ8NEB7 543 aa12.48□□□□□ -0.41
AC009404.1-202ENST00000439955 SPATA18Q8TC71 538 aa12.48□□□□□ -0.41
AC009404.1-202ENST00000439955 PPP1R13BQ96KQ4 1090 aa12.48□□□□□ -0.41
AC009404.1-202ENST00000439955 TCF25Q9BQ70 676 aa12.48□□□□□ -0.41
AC009404.1-202ENST00000439955 TSGA10Q9BZW7 698 aa12.48□□□□□ -0.41
AC009404.1-202ENST00000439955 DNAI2Q9GZS0 605 aa12.48□□□□□ -0.41
AC009404.1-202ENST00000439955 ENTPD7Q9NQZ7 604 aa12.48□□□□□ -0.41
AC009404.1-202ENST00000439955 LIMD1Q9UGP4 676 aa12.48□□□□□ -0.41
AC009404.1-202ENST00000439955 ADAMTS1Q9UHI8 967 aa12.48□□□□□ -0.41
AC009404.1-202ENST00000439955 INTUQ9ULD6 942 aa12.48□□□□□ -0.41
AC009404.1-202ENST00000439955 POLIQ9UNA4 740 aa12.48□□□□□ -0.41
AC009404.1-202ENST00000439955 REXO2Q9Y3B8 237 aaKnown RBP12.48□□□□□ -0.41
AC009404.1-202ENST00000439955 PCDHB7Q9Y5E2 793 aa12.48□□□□□ -0.41
AC009404.1-202ENST00000439955 PLXNA4Q9HCM2 1894 aa12.48□□□□□ -0.41
AC009404.1-202ENST00000439955 GVINP1Q7Z2Y8 2422 aa12.48□□□□□ -0.41
AC009404.1-202ENST00000439955 DMXL1Q9Y485 3027 aa12.48□□□□□ -0.41
AC009404.1-202ENST00000439955 WDR87Q6ZQQ6 2873 aa12.48□□□□□ -0.41
AC009404.1-202ENST00000439955 SCN1AP35498 2009 aa12.47□□□□□ -0.41
AC009404.1-202ENST00000439955 TTC3P53804 2025 aa12.47□□□□□ -0.41
AC009404.1-202ENST00000439955 FAM186AA6NE01 2351 aa12.47□□□□□ -0.41
AC009404.1-202ENST00000439955 A0A087X0T9 212 aa12.47□□□□□ -0.41
AC009404.1-202ENST00000439955 USP27XA6NNY8 438 aa12.47□□□□□ -0.41
AC009404.1-202ENST00000439955 KPNA7A9QM74 516 aa12.47□□□□□ -0.41
AC009404.1-202ENST00000439955 KIF2AO00139 706 aaPredicted RBP12.47□□□□□ -0.41
AC009404.1-202ENST00000439955 PODXLO00592 558 aa12.47□□□□□ -0.41
AC009404.1-202ENST00000439955 ZNF263O14978 683 aa12.47□□□□□ -0.41
AC009404.1-202ENST00000439955 CILPO75339 1184 aa12.47□□□□□ -0.41
AC009404.1-202ENST00000439955 TACC1O75410 805 aa12.47□□□□□ -0.41
AC009404.1-202ENST00000439955 FAM228BP0C875 321 aa12.47□□□□□ -0.41
AC009404.1-202ENST00000439955 GZMAP12544 262 aa12.47□□□□□ -0.41
AC009404.1-202ENST00000439955 TNFAIP3P21580 790 aa12.47□□□□□ -0.41
AC009404.1-202ENST00000439955 AARSP49588 968 aaKnown RBP eCLIP12.47□□□□□ -0.41
AC009404.1-202ENST00000439955 CLCN5P51795 746 aa12.47□□□□□ -0.41
AC009404.1-202ENST00000439955 LILRA4P59901 499 aa12.47□□□□□ -0.41
AC009404.1-202ENST00000439955 CDR2Q01850 454 aa12.47□□□□□ -0.41
AC009404.1-202ENST00000439955 GFPT1Q06210 699 aaPredicted RBP12.47□□□□□ -0.41
AC009404.1-202ENST00000439955 DSC1Q08554 894 aa12.47□□□□□ -0.41
AC009404.1-202ENST00000439955 NOMO2Q5JPE7 1267 aa12.47□□□□□ -0.41
AC009404.1-202ENST00000439955 CLLU1OSQ5K130 101 aa12.47□□□□□ -0.41
AC009404.1-202ENST00000439955 ALKBH5Q6P6C2 394 aaKnown RBP12.47□□□□□ -0.41
AC009404.1-202ENST00000439955 TMEM184AQ6ZMB5 413 aa12.47□□□□□ -0.41
AC009404.1-202ENST00000439955 SCARA5Q6ZMJ2 495 aa12.47□□□□□ -0.41
AC009404.1-202ENST00000439955 TRIM72Q6ZMU5 477 aa12.47□□□□□ -0.41
AC009404.1-202ENST00000439955 SLC47A2Q86VL8 602 aa12.47□□□□□ -0.41
AC009404.1-202ENST00000439955 UNC93AQ86WB7 457 aa12.47□□□□□ -0.41
AC009404.1-202ENST00000439955 TOP6BLQ8N6T0 577 aa12.47□□□□□ -0.41
AC009404.1-202ENST00000439955 COLGALT1Q8NBJ5 622 aa12.47□□□□□ -0.41
AC009404.1-202ENST00000439955 LNX1Q8TBB1 728 aaPredicted RBP12.47□□□□□ -0.41
AC009404.1-202ENST00000439955 DDX1Q92499 740 aaKnown RBP12.47□□□□□ -0.41
AC009404.1-202ENST00000439955 ELMO3Q96BJ8 720 aa12.47□□□□□ -0.41
AC009404.1-202ENST00000439955 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.47□□□□□ -0.41
AC009404.1-202ENST00000439955 MRPL9Q9BYD2 267 aaKnown RBP12.47□□□□□ -0.41
AC009404.1-202ENST00000439955 SDCBP2Q9H190 292 aa12.47□□□□□ -0.41
AC009404.1-202ENST00000439955 AAASQ9NRG9 546 aa12.47□□□□□ -0.41
AC009404.1-202ENST00000439955 RNF19AQ9NV58 838 aa12.47□□□□□ -0.41
AC009404.1-202ENST00000439955 MIOSQ9NXC5 875 aa12.47□□□□□ -0.41
AC009404.1-202ENST00000439955 NAGPAQ9UK23 515 aa12.47□□□□□ -0.41
AC009404.1-202ENST00000439955 PCDHA13Q9Y5I0 950 aa12.47□□□□□ -0.41
AC009404.1-202ENST00000439955 SNX9Q9Y5X1 595 aa12.47□□□□□ -0.41
AC009404.1-202ENST00000439955 ZFHX4Q86UP3 3567 aa12.47□□□□□ -0.41
AC009404.1-202ENST00000439955 ARHGEF37A1IGU5 675 aa12.46□□□□□ -0.41
AC009404.1-202ENST00000439955 DDX3XO00571 662 aaKnown RBP eCLIP12.46□□□□□ -0.41
AC009404.1-202ENST00000439955 PPEF2O14830 753 aa12.46□□□□□ -0.41
AC009404.1-202ENST00000439955 PJA2O43164 708 aa12.46□□□□□ -0.41
AC009404.1-202ENST00000439955 KRT86O43790 486 aa12.46□□□□□ -0.41
AC009404.1-202ENST00000439955 POMCP01189 267 aa12.46□□□□□ -0.41
AC009404.1-202ENST00000439955 GNA15P30679 374 aa12.46□□□□□ -0.41
AC009404.1-202ENST00000439955 PBX3P40426 434 aa12.46□□□□□ -0.41
AC009404.1-202ENST00000439955 MAGEA1P43355 309 aa12.46□□□□□ -0.41
AC009404.1-202ENST00000439955 AFF1P51825 1210 aaKnown RBP12.46□□□□□ -0.41
AC009404.1-202ENST00000439955 FMO1Q01740 532 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms