RNA–Protein interactions for RNA: ENST00000350435.11

UBE2D3-205, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2 BASIC

Gene UBE2D3, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-205ENST00000350435 ACAP3Q96P50 834 aa9.83□□□□□ -0.84
UBE2D3-205ENST00000350435 PGLYRP2Q96PD5 576 aa9.83□□□□□ -0.84
UBE2D3-205ENST00000350435 ZDHHC4Q9NPG8 344 aa9.83□□□□□ -0.84
UBE2D3-205ENST00000350435 ABCA2Q9BZC7 2435 aa9.83□□□□□ -0.84
UBE2D3-205ENST00000350435 A0A0D9SFI3 127 aa9.82□□□□□ -0.84
UBE2D3-205ENST00000350435 CBX4O00257 560 aa9.82□□□□□ -0.84
UBE2D3-205ENST00000350435 NFATC1O95644 943 aa9.82□□□□□ -0.84
UBE2D3-205ENST00000350435 APODP05090 189 aa9.82□□□□□ -0.84
UBE2D3-205ENST00000350435 NCAM1P13591 858 aa9.82□□□□□ -0.84
UBE2D3-205ENST00000350435 OXCT1P55809 520 aa9.82□□□□□ -0.84
UBE2D3-205ENST00000350435 USP4Q13107 963 aa9.82□□□□□ -0.84
UBE2D3-205ENST00000350435 ILKQ13418 452 aa9.82□□□□□ -0.84
UBE2D3-205ENST00000350435 EML3Q32P44 896 aa9.82□□□□□ -0.84
UBE2D3-205ENST00000350435 EMC10Q5UCC4 262 aa9.82□□□□□ -0.84
UBE2D3-205ENST00000350435 USP53Q70EK8 1073 aa9.82□□□□□ -0.84
UBE2D3-205ENST00000350435 TRMT11Q7Z4G4 463 aaKnown RBP9.82□□□□□ -0.84
UBE2D3-205ENST00000350435 SGMS1Q86VZ5 419 aa9.82□□□□□ -0.84
UBE2D3-205ENST00000350435 ATCAYQ86WG3 371 aa9.82□□□□□ -0.84
UBE2D3-205ENST00000350435 EFCAB13Q8IY85 973 aa9.82□□□□□ -0.84
UBE2D3-205ENST00000350435 CTCFLQ8NI51 663 aaPredicted RBP9.82□□□□□ -0.84
UBE2D3-205ENST00000350435 RIN3Q8TB24 985 aa9.82□□□□□ -0.84
UBE2D3-205ENST00000350435 PI4K2BQ8TCG2 481 aa9.82□□□□□ -0.84
UBE2D3-205ENST00000350435 SSC4DQ8WTU2 575 aa9.82□□□□□ -0.84
UBE2D3-205ENST00000350435 IGSF8Q969P0 613 aa9.82□□□□□ -0.84
UBE2D3-205ENST00000350435 SNX11Q9Y5W9 270 aa9.82□□□□□ -0.84
UBE2D3-205ENST00000350435 MYMKA6NI61 221 aa9.81□□□□□ -0.84
UBE2D3-205ENST00000350435 NEFLP07196 543 aa9.81□□□□□ -0.84
UBE2D3-205ENST00000350435 CALM1P0DP23 149 aa9.81□□□□□ -0.84
UBE2D3-205ENST00000350435 CALM2P0DP24 149 aa9.81□□□□□ -0.84
UBE2D3-205ENST00000350435 CALM3P0DP25 149 aa9.81□□□□□ -0.84
UBE2D3-205ENST00000350435 HOXB2P14652 356 aa9.81□□□□□ -0.84
UBE2D3-205ENST00000350435 DDX6P26196 483 aaKnown RBP eCLIP9.81□□□□□ -0.84
UBE2D3-205ENST00000350435 COL8A1P27658 744 aa9.81□□□□□ -0.84
UBE2D3-205ENST00000350435 CASRP41180 1078 aa9.81□□□□□ -0.84
UBE2D3-205ENST00000350435 KIR2DL1P43626 348 aaPredicted RBP9.81□□□□□ -0.84
UBE2D3-205ENST00000350435 CSNK1EP49674 416 aaKnown RBP9.81□□□□□ -0.84
UBE2D3-205ENST00000350435 AFF3P51826 1226 aaKnown RBP9.81□□□□□ -0.84
UBE2D3-205ENST00000350435 MFAP1P55081 439 aaKnown RBP9.81□□□□□ -0.84
UBE2D3-205ENST00000350435 PTENP60484 403 aa9.81□□□□□ -0.84
UBE2D3-205ENST00000350435 IL9RQ01113 521 aa9.81□□□□□ -0.84
UBE2D3-205ENST00000350435 AP3B2Q13367 1082 aa9.81□□□□□ -0.84
UBE2D3-205ENST00000350435 ZNF268Q14587 947 aaPredicted RBP9.81□□□□□ -0.84
UBE2D3-205ENST00000350435 VEPH1Q14D04 833 aa9.81□□□□□ -0.84
UBE2D3-205ENST00000350435 TAF12Q16514 161 aa9.81□□□□□ -0.84
UBE2D3-205ENST00000350435 KIF19Q2TAC6 998 aa9.81□□□□□ -0.84
UBE2D3-205ENST00000350435 DCAF12L1Q5VU92 463 aa9.81□□□□□ -0.84
UBE2D3-205ENST00000350435 NFXL1Q6ZNB6 911 aa9.81□□□□□ -0.84
UBE2D3-205ENST00000350435 HEATR3Q7Z4Q2 680 aa9.81□□□□□ -0.84
UBE2D3-205ENST00000350435 FERMT3Q86UX7 667 aa9.81□□□□□ -0.84
UBE2D3-205ENST00000350435 BEST2Q8NFU1 509 aa9.81□□□□□ -0.84
UBE2D3-205ENST00000350435 ZNF564Q8TBZ8 553 aaPredicted RBP9.81□□□□□ -0.84
UBE2D3-205ENST00000350435 TCP11Q8WWU5 503 aa9.81□□□□□ -0.84
UBE2D3-205ENST00000350435 RFFLQ8WZ73 363 aa9.81□□□□□ -0.84
UBE2D3-205ENST00000350435 CCNL2Q96S94 520 aaPredicted RBP9.81□□□□□ -0.84
UBE2D3-205ENST00000350435 PNKPQ96T60 521 aa9.81□□□□□ -0.84
UBE2D3-205ENST00000350435 LZTS2Q9BRK4 669 aa9.81□□□□□ -0.84
UBE2D3-205ENST00000350435 CXCL16Q9H2A7 254 aa9.81□□□□□ -0.84
UBE2D3-205ENST00000350435 WDR70Q9NW82 654 aa9.81□□□□□ -0.84
UBE2D3-205ENST00000350435 SLC27A5Q9Y2P5 690 aa9.81□□□□□ -0.84
UBE2D3-205ENST00000350435 BOLA1Q9Y3E2 137 aa9.81□□□□□ -0.84
UBE2D3-205ENST00000350435 PCDHB1Q9Y5F3 818 aa9.81□□□□□ -0.84
UBE2D3-205ENST00000350435 HIVEP1P15822 2718 aa9.8□□□□□ -0.84
UBE2D3-205ENST00000350435 A0A1B0GUA9 196 aa9.8□□□□□ -0.84
UBE2D3-205ENST00000350435 LAD1O00515 517 aa9.8□□□□□ -0.84
UBE2D3-205ENST00000350435 KCNK3O14649 394 aa9.8□□□□□ -0.84
UBE2D3-205ENST00000350435 IFIT3O14879 490 aaKnown RBP9.8□□□□□ -0.84
UBE2D3-205ENST00000350435 STBD1O95210 358 aa9.8□□□□□ -0.84
UBE2D3-205ENST00000350435 KAT7O95251 611 aa9.8□□□□□ -0.84
UBE2D3-205ENST00000350435 CD6P30203 668 aa9.8□□□□□ -0.84
UBE2D3-205ENST00000350435 LSSP48449 732 aa9.8□□□□□ -0.84
UBE2D3-205ENST00000350435 TEAD4Q15561 434 aa9.8□□□□□ -0.84
UBE2D3-205ENST00000350435 AMHR2Q16671 573 aa9.8□□□□□ -0.84
UBE2D3-205ENST00000350435 IMMTQ16891 758 aaKnown RBP9.8□□□□□ -0.84
UBE2D3-205ENST00000350435 FHL5Q5TD97 284 aa9.8□□□□□ -0.84
UBE2D3-205ENST00000350435 PLA2G4FQ68DD2 849 aa9.8□□□□□ -0.84
UBE2D3-205ENST00000350435 CYB5R4Q7L1T6 521 aa9.8□□□□□ -0.84
UBE2D3-205ENST00000350435 TEX2Q8IWB9 1127 aa9.8□□□□□ -0.84
UBE2D3-205ENST00000350435 APPL2Q8NEU8 664 aa9.8□□□□□ -0.84
UBE2D3-205ENST00000350435 CADM4Q8NFZ8 388 aa9.8□□□□□ -0.84
UBE2D3-205ENST00000350435 SGF29Q96ES7 293 aa9.8□□□□□ -0.84
UBE2D3-205ENST00000350435 GPR174Q9BXC1 333 aa9.8□□□□□ -0.84
UBE2D3-205ENST00000350435 CRISPLD1Q9H336 500 aa9.8□□□□□ -0.84
UBE2D3-205ENST00000350435 POLR1BQ9H9Y6 1135 aa9.8□□□□□ -0.84
UBE2D3-205ENST00000350435 IL21Q9HBE4 155 aa9.8□□□□□ -0.84
UBE2D3-205ENST00000350435 GOLGA2P5Q9HBQ8 144 aa9.8□□□□□ -0.84
UBE2D3-205ENST00000350435 RIC8AQ9NPQ8 531 aa9.8□□□□□ -0.84
UBE2D3-205ENST00000350435 DKK3Q9UBP4 350 aa9.8□□□□□ -0.84
UBE2D3-205ENST00000350435 ADAMTS1Q9UHI8 967 aa9.8□□□□□ -0.84
UBE2D3-205ENST00000350435 EIF2B4Q9UI10 523 aaKnown RBP9.8□□□□□ -0.84
UBE2D3-205ENST00000350435 ANKRD6Q9Y2G4 727 aa9.8□□□□□ -0.84
UBE2D3-205ENST00000350435 NUB1Q9Y5A7 615 aa9.8□□□□□ -0.84
UBE2D3-205ENST00000350435 hCG_1642624A0A1W2PR95 340 aa9.79□□□□□ -0.84
UBE2D3-205ENST00000350435 H0Y8X5 98 aa9.79□□□□□ -0.84
UBE2D3-205ENST00000350435 PAPSS1O43252 624 aaPredicted RBP9.79□□□□□ -0.84
UBE2D3-205ENST00000350435 B4GALT5O43286 388 aa9.79□□□□□ -0.84
UBE2D3-205ENST00000350435 GAS7O60861 476 aa9.79□□□□□ -0.84
UBE2D3-205ENST00000350435 VNN2O95498 520 aa9.79□□□□□ -0.84
UBE2D3-205ENST00000350435 MT-CO3P00414 261 aa9.79□□□□□ -0.84
UBE2D3-205ENST00000350435 CYP3A4P08684 503 aa9.79□□□□□ -0.84
UBE2D3-205ENST00000350435 TNFRSF4P43489 277 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms