RNA–Protein interactions for RNA: YPL174C

NIP100, Transcript of Large subunit of the dynactin complex, yeastyeast

Gene NIP100, Length 2,607 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NIP100YPL174C ADE1P27616 306 aa0□□□□□ -2.41
NIP100YPL174C CCS1P40202 249 aaKnown RBP0□□□□□ -2.41
NIP100YPL174C YML079WQ03629 201 aa0□□□□□ -2.41
NIP100YPL174C AVO2Q04749 426 aa0□□□□□ -2.41
NIP100YPL174C YOL013W-AP0C272 63 aaPredicted RBP0□□□□□ -2.41
NIP100YPL174C PDR12Q02785 1511 aa0□□□□□ -2.41
NIP100YPL174C YMR315WQ04869 349 aaKnown RBP0□□□□□ -2.41
NIP100YPL174C NOC4Q06512 552 aaPredicted RBP0□□□□□ -2.41
NIP100YPL174C KIN28P06242 306 aa-0□□□□□ -2.41
NIP100YPL174C RPB4P20433 221 aaPredicted RBP-0□□□□□ -2.41
NIP100YPL174C SHB17P36136 271 aaKnown RBP-0□□□□□ -2.41
NIP100YPL174C YKR005CQ02203 525 aa-0□□□□□ -2.41
NIP100YPL174C UIP4Q08926 304 aa-0□□□□□ -2.41
NIP100YPL174C USO1P25386 1790 aa-0.01□□□□□ -2.41
NIP100YPL174C SKI3P17883 1432 aaKnown RBP-0.01□□□□□ -2.41
NIP100YPL174C MGR2Q02889 113 aa-0.01□□□□□ -2.41
NIP100YPL174C GRX8Q05926 109 aa-0.01□□□□□ -2.41
NIP100YPL174C SHH4Q06236 168 aa-0.01□□□□□ -2.41
NIP100YPL174C YLR419WQ06698 1435 aaKnown RBP-0.01□□□□□ -2.41
NIP100YPL174C HAP2P06774 265 aa-0.01□□□□□ -2.41
NIP100YPL174C MAK31P23059 88 aa-0.01□□□□□ -2.41
NIP100YPL174C APS3P47064 194 aa-0.01□□□□□ -2.41
NIP100YPL174C RIM9Q04734 239 aa-0.01□□□□□ -2.41
NIP100YPL174C YBT1P32386 1661 aa-0.01□□□□□ -2.41
NIP100YPL174C IQG1Q12280 1495 aa-0.02□□□□□ -2.41
NIP100YPL174C QCR7P00128 127 aa-0.02□□□□□ -2.41
NIP100YPL174C RFC2P40348 353 aa-0.02□□□□□ -2.41
NIP100YPL174C YGL230CP53074 147 aa-0.02□□□□□ -2.41
NIP100YPL174C PGA1P53896 198 aa-0.02□□□□□ -2.41
NIP100YPL174C LYS2P07702 1392 aa-0.02□□□□□ -2.41
NIP100YPL174C YGR269WP40326 108 aa-0.02□□□□□ -2.41
NIP100YPL174C URA2P07259 2214 aaKnown RBP-0.03□□□□□ -2.41
NIP100YPL174C ARO80Q04052 950 aa-0.03□□□□□ -2.41
NIP100YPL174C YOR214CQ12282 236 aa-0.03□□□□□ -2.41
NIP100YPL174C YPK9Q12697 1472 aa-0.03□□□□□ -2.41
NIP100YPL174C FLO1P32768 1537 aa-0.03□□□□□ -2.41
NIP100YPL174C RPS25BP0C0T4 108 aaKnown RBP-0.03□□□□□ -2.41
NIP100YPL174C RPS22AP0C0W1 130 aaKnown RBP-0.03□□□□□ -2.41
NIP100YPL174C UBC6P33296 250 aaPredicted RBP-0.03□□□□□ -2.41
NIP100YPL174C MPD1Q12404 318 aaKnown RBP-0.03□□□□□ -2.41
NIP100YPL174C RPS25AQ3E792 108 aaPredicted RBP-0.03□□□□□ -2.41
NIP100YPL174C RPS22BQ3E7Y3 130 aaKnown RBP-0.03□□□□□ -2.41
NIP100YPL174C IRA1P18963 3092 aa-0.04□□□□□ -2.42
NIP100YPL174C YRA2P36036 203 aaKnown RBP RIP-Chip data-0.04□□□□□ -2.42not detected
NIP100YPL174C GLR1P41921 483 aaKnown RBP-0.04□□□□□ -2.42
NIP100YPL174C YPR127WQ06494 345 aa-0.04□□□□□ -2.42
NIP100YPL174C KRE5P22023 1365 aa-0.04□□□□□ -2.42
NIP100YPL174C ROM2P51862 1356 aaKnown RBP-0.04□□□□□ -2.42
NIP100YPL174C PTC1P35182 281 aa-0.04□□□□□ -2.42
NIP100YPL174C SHG1P38337 142 aa-0.04□□□□□ -2.42
NIP100YPL174C HHY1P39982 102 aa-0.04□□□□□ -2.42
NIP100YPL174C HOP2P53187 214 aa-0.04□□□□□ -2.42
NIP100YPL174C RNH1Q04740 348 aa-0.04□□□□□ -2.42
NIP100YPL174C YCL012CQ8J0M4 134 aa-0.04□□□□□ -2.42
NIP100YPL174C AHC2P25649 128 aa-0.05□□□□□ -2.42
NIP100YPL174C YKL102CP34249 101 aa-0.05□□□□□ -2.42
NIP100YPL174C YJL009WP47078 108 aa-0.05□□□□□ -2.42
NIP100YPL174C PEX11Q12462 236 aa-0.05□□□□□ -2.42
NIP100YPL174C FMP32P43557 207 aa-0.05□□□□□ -2.42
NIP100YPL174C YDR034W-BQ6Q5X2 51 aa-0.05□□□□□ -2.42
NIP100YPL174C ADE6P38972 1358 aaKnown RBP-0.05□□□□□ -2.42
NIP100YPL174C TY1B-PR2P0C2J0 1756 aa-0.06□□□□□ -2.42
NIP100YPL174C HYP2P23301 157 aaKnown RBP-0.06□□□□□ -2.42
NIP100YPL174C YKT6P36015 200 aaKnown RBP-0.06□□□□□ -2.42
NIP100YPL174C YMR141CP40211 102 aa-0.06□□□□□ -2.42
NIP100YPL174C LIP1Q03579 150 aa-0.06□□□□□ -2.42
NIP100YPL174C YOR381W-AQ3E804 55 aa-0.06□□□□□ -2.42
NIP100YPL174C ECM31P38122 312 aa-0.06□□□□□ -2.42
NIP100YPL174C FMP23P38231 175 aa-0.06□□□□□ -2.42
NIP100YPL174C CWC21Q03375 135 aaKnown RBP-0.06□□□□□ -2.42
NIP100YPL174C FAS2P19097 1887 aaKnown RBP-0.07□□□□□ -2.42
NIP100YPL174C SPS2P08459 502 aa-0.07□□□□□ -2.42
NIP100YPL174C YGL041W-AP0C5N3 154 aa-0.07□□□□□ -2.42
NIP100YPL174C YJL197C-AP0C5P0 93 aa-0.07□□□□□ -2.42
NIP100YPL174C YBR027CP38220 110 aa-0.07□□□□□ -2.42
NIP100YPL174C YEL014CP39999 101 aa-0.07□□□□□ -2.42
NIP100YPL174C GPI17Q04080 534 aa-0.07□□□□□ -2.42
NIP100YPL174C YEL073CP39974 107 aa-0.07□□□□□ -2.42
NIP100YPL174C NQM1P53228 333 aaPredicted RBP-0.07□□□□□ -2.42
NIP100YPL174C TY4B-JP47024 1803 aa-0.07□□□□□ -2.42
NIP100YPL174C IRA2P19158 3079 aa-0.08□□□□□ -2.42
NIP100YPL174C SPT14P32363 452 aa-0.08□□□□□ -2.42
NIP100YPL174C HTD2P38790 280 aaKnown RBP-0.08□□□□□ -2.42
NIP100YPL174C HPT1Q04178 221 aaKnown RBP-0.08□□□□□ -2.42
NIP100YPL174C YET3Q07451 203 aa-0.08□□□□□ -2.42
NIP100YPL174C YLR307C-AQ3E825 87 aa-0.08□□□□□ -2.42
NIP100YPL174C TY1B-DR5P0C2I2 1755 aa-0.08□□□□□ -2.42
NIP100YPL174C TY1B-DR6P0C2I3 1755 aa-0.08□□□□□ -2.42
NIP100YPL174C TY1B-LR2P0C2I5 1755 aa-0.08□□□□□ -2.42
NIP100YPL174C TY1B-LR3P0C2I6 1755 aaKnown RBP-0.08□□□□□ -2.42
NIP100YPL174C TY1B-PR1P0C2I9 1755 aaKnown RBP-0.08□□□□□ -2.42
NIP100YPL174C TY1B-PR3P0C2J1 1755 aaKnown RBP-0.08□□□□□ -2.42
NIP100YPL174C TY1B-JR1P47098 1755 aa-0.08□□□□□ -2.42
NIP100YPL174C TY1B-JR2P47100 1755 aaKnown RBP-0.08□□□□□ -2.42
NIP100YPL174C TY1B-ML2Q03434 1755 aaKnown RBP-0.08□□□□□ -2.42
NIP100YPL174C TY1B-ER1Q03612 1755 aa-0.08□□□□□ -2.42
NIP100YPL174C TY1B-ER2Q03619 1755 aa-0.08□□□□□ -2.42
NIP100YPL174C TY1B-DR1Q03855 1755 aa-0.08□□□□□ -2.42
NIP100YPL174C TY1B-MR1Q04214 1755 aa-0.08□□□□□ -2.42
NIP100YPL174C TY1B-MR2Q04670 1755 aaKnown RBP-0.08□□□□□ -2.42
Retrieved 100 of 5,963 RNA–protein pairs in 52.8 ms