RNA–Protein interactions for RNA: YNL335W

DDI3, Transcript of Protein of unknown function, yeast

Gene DDI3, Length 678 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DDI3	YNL335W	YSF3	P0C074	85 aa	Predicted RBP	2.59	□□□□□ -1.99
DDI3	YNL335W	RFA3	P26755	122 aa	Known RBP	2.59	□□□□□ -1.99
DDI3	YNL335W	YHR125W	P38831	101 aa		2.59	□□□□□ -1.99
DDI3	YNL335W	YHR180W	P38868	163 aa		2.59	□□□□□ -1.99
DDI3	YNL335W	YEA6	P39953	335 aa		2.59	□□□□□ -1.99
DDI3	YNL335W	RPL13B	P40212	199 aa	Known RBP	2.59	□□□□□ -1.99
DDI3	YNL335W	ERJ5	P43613	295 aa	Predicted RBP	2.59	□□□□□ -1.99
DDI3	YNL335W	NCE101	Q02820	53 aa		2.59	□□□□□ -1.99
DDI3	YNL335W	TMA23	Q03525	211 aa		2.59	□□□□□ -1.99
DDI3	YNL335W	DCN1	Q12395	269 aa		2.59	□□□□□ -1.99
DDI3	YNL335W	EMC6	Q12431	108 aa		2.59	□□□□□ -1.99
DDI3	YNL335W	RPL13A	Q12690	199 aa	Predicted RBP	2.59	□□□□□ -1.99
DDI3	YNL335W	HTL1	Q9URQ5	78 aa		2.59	□□□□□ -1.99
DDI3	YNL335W	VPS13	Q07878	3144 aa		2.59	□□□□□ -2
DDI3	YNL335W	MSW1	P04803	379 aa		2.58	□□□□□ -2
DDI3	YNL335W	YHR032W-A	P0C5N6	59 aa		2.58	□□□□□ -2
DDI3	YNL335W	NTF2	P33331	125 aa	Known RBP	2.58	□□□□□ -2
DDI3	YNL335W	UMP1	P38293	148 aa		2.58	□□□□□ -2
DDI3	YNL335W	YBR292C	P38357	123 aa		2.58	□□□□□ -2
DDI3	YNL335W	YPT31	P38555	223 aa	Known RBP	2.58	□□□□□ -2
DDI3	YNL335W	YEA4	P40004	342 aa		2.58	□□□□□ -2
DDI3	YNL335W	SPC25	P40014	221 aa		2.58	□□□□□ -2
DDI3	YNL335W	LSM4	P40070	187 aa	Known RBP	2.58	□□□□□ -2
DDI3	YNL335W	RFC2	P40348	353 aa		2.58	□□□□□ -2
DDI3	YNL335W	PAU15	P40585	124 aa		2.58	□□□□□ -2
DDI3	YNL335W	MGA1	P53050	456 aa		2.58	□□□□□ -2
DDI3	YNL335W	VPS28	Q02767	242 aa		2.58	□□□□□ -2
DDI3	YNL335W	CGI121	Q03705	181 aa	Known RBP	2.58	□□□□□ -2
DDI3	YNL335W	THI74	Q04083	370 aa		2.58	□□□□□ -2
DDI3	YNL335W	YPR174C	Q06616	221 aa	Predicted RBP	2.58	□□□□□ -2
DDI3	YNL335W	MCP1	Q12106	302 aa		2.58	□□□□□ -2
DDI3	YNL335W	YOR015W	Q12169	119 aa		2.58	□□□□□ -2
DDI3	YNL335W	MRS4	P23500	304 aa		2.57	□□□□□ -2
DDI3	YNL335W	YBR013C	P38215	129 aa		2.57	□□□□□ -2
DDI3	YNL335W	FIG1	P38224	298 aa		2.57	□□□□□ -2
DDI3	YNL335W	TRS20	P38334	175 aa		2.57	□□□□□ -2
DDI3	YNL335W	COX15	P40086	486 aa		2.57	□□□□□ -2
DDI3	YNL335W	FLX1	P40464	311 aa		2.57	□□□□□ -2
DDI3	YNL335W	YFR054C	P43622	192 aa		2.57	□□□□□ -2
DDI3	YNL335W	ERV14	P53173	138 aa		2.57	□□□□□ -2
DDI3	YNL335W	YLR460C	P54007	376 aa		2.57	□□□□□ -2
DDI3	YNL335W	SEN15	Q04675	128 aa		2.57	□□□□□ -2
DDI3	YNL335W	IRC19	Q07843	230 aa		2.57	□□□□□ -2
DDI3	YNL335W	YLR118C	Q12354	227 aa		2.57	□□□□□ -2
DDI3	YNL335W	YOR343C	Q12484	108 aa		2.57	□□□□□ -2
DDI3	YNL335W	YCR101C	P25607	182 aa		2.56	□□□□□ -2
DDI3	YNL335W	RPS27A	P35997	82 aa	Known RBP	2.56	□□□□□ -2
DDI3	YNL335W	MRPL28	P36527	147 aa		2.56	□□□□□ -2
DDI3	YNL335W	RPS27B	P38711	82 aa		2.56	□□□□□ -2
DDI3	YNL335W	PHS1	P40857	217 aa		2.56	□□□□□ -2
DDI3	YNL335W	CYT2	Q00873	224 aa		2.56	□□□□□ -2
DDI3	YNL335W	CUE4	Q04201	117 aa	Predicted RBP	2.56	□□□□□ -2
DDI3	YNL335W	YMR082C	Q04276	118 aa		2.56	□□□□□ -2
DDI3	YNL335W	AVO2	Q04749	426 aa		2.56	□□□□□ -2
DDI3	YNL335W	MSA1	Q08471	629 aa		2.56	□□□□□ -2
DDI3	YNL335W	AKR2	Q12013	749 aa		2.56	□□□□□ -2
DDI3	YNL335W	MRPL44	P19956	98 aa		2.55	□□□□□ -2
DDI3	YNL335W	STP22	P25604	385 aa		2.55	□□□□□ -2
DDI3	YNL335W	HSP150	P32478	413 aa		2.55	□□□□□ -2
DDI3	YNL335W	SLM6	P38343	150 aa		2.55	□□□□□ -2
DDI3	YNL335W	TRM9	P49957	279 aa		2.55	□□□□□ -2
DDI3	YNL335W	ERG25	P53045	309 aa		2.55	□□□□□ -2
DDI3	YNL335W	NSA1	P53136	463 aa	Predicted RBP	2.55	□□□□□ -2
DDI3	YNL335W	PAU4	P53427	120 aa		2.55	□□□□□ -2
DDI3	YNL335W	YDR102C	Q03864	110 aa		2.55	□□□□□ -2
DDI3	YNL335W	YMR090W	Q04304	227 aa	Known RBP	2.55	□□□□□ -2
DDI3	YNL335W	COA2	Q3E823	68 aa		2.55	□□□□□ -2
DDI3	YNL335W	YOR020W-A	Q3E824	90 aa		2.55	□□□□□ -2
DDI3	YNL335W	COA6	Q3E846	104 aa		2.55	□□□□□ -2
DDI3	YNL335W	CDC36	P06100	191 aa	Predicted RBP	2.54	□□□□□ -2
DDI3	YNL335W	PAU19	P0CE85	124 aa		2.54	□□□□□ -2
DDI3	YNL335W	PAU21	P0CE86	164 aa		2.54	□□□□□ -2
DDI3	YNL335W	PAU22	P0CE87	164 aa		2.54	□□□□□ -2
DDI3	YNL335W	PAU1	P0CE88	120 aa		2.54	□□□□□ -2
DDI3	YNL335W	PAU14	P0CE89	120 aa		2.54	□□□□□ -2
DDI3	YNL335W	PAU6	P0CE90	120 aa		2.54	□□□□□ -2
DDI3	YNL335W	PAU18	P0CE91	120 aa		2.54	□□□□□ -2
DDI3	YNL335W	PAU8	P0CE92	120 aa		2.54	□□□□□ -2
DDI3	YNL335W	PAU11	P0CE93	120 aa		2.54	□□□□□ -2
DDI3	YNL335W	FUN14	P18411	198 aa		2.54	□□□□□ -2
DDI3	YNL335W	SPO13	P23624	291 aa		2.54	□□□□□ -2
DDI3	YNL335W	PAU3	P25610	124 aa		2.54	□□□□□ -2
DDI3	YNL335W	OCH1	P31755	480 aa		2.54	□□□□□ -2
DDI3	YNL335W	VMA11	P32842	164 aa		2.54	□□□□□ -2
DDI3	YNL335W	CPR5	P35176	225 aa		2.54	□□□□□ -2
DDI3	YNL335W	SRX1	P36077	127 aa		2.54	□□□□□ -2
DDI3	YNL335W	MRPL11	P36521	249 aa	Predicted RBP	2.54	□□□□□ -2
DDI3	YNL335W	PAU13	P38725	120 aa		2.54	□□□□□ -2
DDI3	YNL335W	YAR068W	P39564	161 aa		2.54	□□□□□ -2
DDI3	YNL335W	SMD3	P43321	101 aa	Known RBP	2.54	□□□□□ -2
DDI3	YNL335W	PAU5	P43575	122 aa		2.54	□□□□□ -2
DDI3	YNL335W	CIS3	P47001	227 aa		2.54	□□□□□ -2
DDI3	YNL335W	PAU10	Q03050	120 aa		2.54	□□□□□ -2
DDI3	YNL335W	DIG2	Q03373	323 aa	Known RBP	2.54	□□□□□ -2
DDI3	YNL335W	ATG39	Q06159	398 aa		2.54	□□□□□ -2
DDI3	YNL335W	PAU20	Q08322	120 aa		2.54	□□□□□ -2
DDI3	YNL335W	YRA1	Q12159	226 aa	Known RBP	2.54	□□□□□ -2
DDI3	YNL335W	HUT1	Q12520	339 aa		2.54	□□□□□ -2
DDI3	YNL335W	PAU9	Q3E770	120 aa		2.54	□□□□□ -2
DDI3	YNL335W	YIL134C-A	Q45U18	67 aa		2.54	□□□□□ -2

Retrieved 100 of 5,963 RNA–protein pairs in 54.3 ms