RNA–Protein interactions for RNA: YNL242W

ATG2, Transcript of Peripheral membrane protein required for autophagic vesicle formation, yeast

Gene ATG2, Length 4,779 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ATG2	YNL242W	NCE101	Q02820	53 aa		3.43	□□□□□ -1.86
ATG2	YNL242W	SDC1	Q03323	175 aa		3.43	□□□□□ -1.86
ATG2	YNL242W	YOR186W	Q08560	144 aa		3.43	□□□□□ -1.86
ATG2	YNL242W	RLM1	Q12224	676 aa		3.43	□□□□□ -1.86
ATG2	YNL242W	MSN1	P22148	382 aa		3.43	□□□□□ -1.86
ATG2	YNL242W	YGL230C	P53074	147 aa		3.43	□□□□□ -1.86
ATG2	YNL242W	YNR064C	P53750	290 aa		3.43	□□□□□ -1.86
ATG2	YNL242W	CDC39	P25655	2108 aa	Known RBP	3.43	□□□□□ -1.86
ATG2	YNL242W	YUH1	P35127	236 aa		3.42	□□□□□ -1.86
ATG2	YNL242W	ECO1	P43605	281 aa		3.42	□□□□□ -1.86
ATG2	YNL242W	FIT3	Q08907	204 aa		3.42	□□□□□ -1.86
ATG2	YNL242W	DAD1	Q12248	94 aa		3.42	□□□□□ -1.86
ATG2	YNL242W	VAR1	P02381	398 aa		3.42	□□□□□ -1.86
ATG2	YNL242W	SEC11	P15367	167 aa		3.42	□□□□□ -1.86
ATG2	YNL242W	SAS2	P40963	338 aa		3.42	□□□□□ -1.86
ATG2	YNL242W	YJR015W	P47090	510 aa		3.42	□□□□□ -1.86
ATG2	YNL242W	YOR376W	Q08900	122 aa		3.42	□□□□□ -1.86
ATG2	YNL242W	YDL180W	Q12301	547 aa		3.42	□□□□□ -1.86
ATG2	YNL242W	YOR192C-C	Q3E736	78 aa		3.42	□□□□□ -1.86
ATG2	YNL242W	YLR361C-A	Q3E795	98 aa		3.42	□□□□□ -1.86
ATG2	YNL242W	RPS16A	P0CX51	143 aa	Known RBP	3.42	□□□□□ -1.86
ATG2	YNL242W	RPS16B	P0CX52	143 aa	Known RBP	3.42	□□□□□ -1.86
ATG2	YNL242W	GPP2	P40106	250 aa	Known RBP	3.42	□□□□□ -1.86
ATG2	YNL242W	XBP1	P40489	647 aa		3.42	□□□□□ -1.86
ATG2	YNL242W	YOL029C	Q08187	201 aa		3.42	□□□□□ -1.86
ATG2	YNL242W	POC4	Q12245	148 aa	Predicted RBP	3.42	□□□□□ -1.86
ATG2	YNL242W	YOR343C	Q12484	108 aa		3.42	□□□□□ -1.86
ATG2	YNL242W	YPL229W	Q99395	206 aa		3.42	□□□□□ -1.86
ATG2	YNL242W	YBL059W	P34224	193 aa		3.42	□□□□□ -1.86
ATG2	YNL242W	DSK2	P48510	373 aa		3.42	□□□□□ -1.86
ATG2	YNL242W	YOR032W-A	Q8TGS1	66 aa		3.42	□□□□□ -1.86
ATG2	YNL242W	ACC1	Q00955	2233 aa	Known RBP	3.41	□□□□□ -1.86
ATG2	YNL242W	CCH1	P50077	2039 aa		3.41	□□□□□ -1.86
ATG2	YNL242W	RPS22A	P0C0W1	130 aa	Known RBP	3.41	□□□□□ -1.86
ATG2	YNL242W	RPL30	P14120	105 aa	Known RBP	3.41	□□□□□ -1.86
ATG2	YNL242W	PSD1	P39006	500 aa		3.41	□□□□□ -1.86
ATG2	YNL242W	RIM9	Q04734	239 aa		3.41	□□□□□ -1.86
ATG2	YNL242W	NIP7	Q08962	181 aa	Known RBP	3.41	□□□□□ -1.86
ATG2	YNL242W	MRS1	P07266	363 aa		3.41	□□□□□ -1.86
ATG2	YNL242W	FPR1	P20081	114 aa	Known RBP	3.41	□□□□□ -1.86
ATG2	YNL242W	YCR007C	P25354	239 aa		3.41	□□□□□ -1.86
ATG2	YNL242W	GPI2	P46961	280 aa		3.41	□□□□□ -1.86
ATG2	YNL242W	YGL118C	P53132	145 aa		3.41	□□□□□ -1.86
ATG2	YNL242W	GRE1	Q08969	168 aa		3.41	□□□□□ -1.86
ATG2	YNL242W	MCP1	Q12106	302 aa		3.41	□□□□□ -1.86
ATG2	YNL242W	YMR316C-A	I2HB70	103 aa		3.41	□□□□□ -1.86
ATG2	YNL242W	HEM13	P11353	328 aa	Known RBP	3.41	□□□□□ -1.86
ATG2	YNL242W	YCR023C	P25351	611 aa		3.41	□□□□□ -1.86
ATG2	YNL242W	RPB7	P34087	171 aa		3.41	□□□□□ -1.86
ATG2	YNL242W	ECM33	P38248	429 aa	Known RBP	3.41	□□□□□ -1.86
ATG2	YNL242W	UME6	P39001	836 aa		3.41	□□□□□ -1.86
ATG2	YNL242W	OXA1	P39952	402 aa		3.41	□□□□□ -1.86
ATG2	YNL242W	PRM5	P40476	318 aa		3.41	□□□□□ -1.86
ATG2	YNL242W	YIL059C	P40520	121 aa		3.41	□□□□□ -1.86
ATG2	YNL242W	GRH1	Q04410	372 aa	Known RBP	3.41	□□□□□ -1.86
ATG2	YNL242W	SWD3	P38123	315 aa		3.4	□□□□□ -1.86
ATG2	YNL242W	MRX11	Q03079	207 aa		3.4	□□□□□ -1.86
ATG2	YNL242W	YOL118C	Q08259	102 aa		3.4	□□□□□ -1.86
ATG2	YNL242W	IRC23	Q08416	157 aa		3.4	□□□□□ -1.86
ATG2	YNL242W	YPL264C	Q08980	353 aa		3.4	□□□□□ -1.86
ATG2	YNL242W	NCE102	Q12207	173 aa	RIP-Chip data	3.4	□□□□□ -1.86	not detected
ATG2	YNL242W	YLR365W	Q7LIF2	110 aa		3.4	□□□□□ -1.86
ATG2	YNL242W	YLR358C	O13565	187 aa		3.4	□□□□□ -1.86
ATG2	YNL242W	SCO1	P23833	295 aa		3.4	□□□□□ -1.86
ATG2	YNL242W	FMP46	P36141	133 aa	Known RBP	3.4	□□□□□ -1.86
ATG2	YNL242W	CWP2	P43497	92 aa		3.4	□□□□□ -1.86
ATG2	YNL242W	YJR096W	P47137	282 aa		3.4	□□□□□ -1.86
ATG2	YNL242W	YDL009C	Q12210	107 aa		3.4	□□□□□ -1.86
ATG2	YNL242W	YBR255C-A	Q3E776	120 aa		3.4	□□□□□ -1.86
ATG2	YNL242W	PCL2	P25693	308 aa		3.4	□□□□□ -1.87
ATG2	YNL242W	YOX1	P34161	385 aa		3.4	□□□□□ -1.87
ATG2	YNL242W	YER079W	P40052	210 aa	Known RBP	3.4	□□□□□ -1.87
ATG2	YNL242W	YGR269W	P40326	108 aa		3.4	□□□□□ -1.87
ATG2	YNL242W	KEG1	P43614	200 aa		3.4	□□□□□ -1.87
ATG2	YNL242W	POP3	P53833	195 aa	Predicted RBP	3.4	□□□□□ -1.87
ATG2	YNL242W	PRM3	Q08931	133 aa		3.4	□□□□□ -1.87
ATG2	YNL242W	RPS22B	Q3E7Y3	130 aa	Known RBP	3.4	□□□□□ -1.87
ATG2	YNL242W	RPL23A	P0CX41	137 aa	Known RBP	3.4	□□□□□ -1.87
ATG2	YNL242W	RPL23B	P0CX42	137 aa	Known RBP	3.4	□□□□□ -1.87
ATG2	YNL242W	MXR2	P25566	168 aa		3.4	□□□□□ -1.87
ATG2	YNL242W	HSP150	P32478	413 aa		3.4	□□□□□ -1.87
ATG2	YNL242W	YNL200C	P40165	246 aa	Known RBP	3.4	□□□□□ -1.87
ATG2	YNL242W	AIM11	P87275	137 aa		3.4	□□□□□ -1.87
ATG2	YNL242W	DPP1	Q05521	289 aa		3.4	□□□□□ -1.87
ATG2	YNL242W	YPR108W-A	Q3E7B3	70 aa		3.4	□□□□□ -1.87
ATG2	YNL242W	SHU1	P38751	150 aa		3.39	□□□□□ -1.87
ATG2	YNL242W	CYB5	P40312	120 aa		3.39	□□□□□ -1.87
ATG2	YNL242W	YIL012W	P40551	113 aa		3.39	□□□□□ -1.87
ATG2	YNL242W	HNT2	P49775	206 aa		3.39	□□□□□ -1.87
ATG2	YNL242W	RDL2	Q08742	149 aa	Known RBP	3.39	□□□□□ -1.87
ATG2	YNL242W	NHP2	P32495	156 aa	Predicted RBP	3.39	□□□□□ -1.87
ATG2	YNL242W	SGN1	P40561	250 aa	Known RBP RIP-Chip data	3.39	□□□□□ -1.87	not detected
ATG2	YNL242W	OST2	P46964	130 aa		3.39	□□□□□ -1.87
ATG2	YNL242W	RPL15B	P54780	204 aa	Predicted RBP	3.39	□□□□□ -1.87
ATG2	YNL242W	YIL102C-A	Q2V2P5	75 aa		3.39	□□□□□ -1.87
ATG2	YNL242W	YCL021W-A	Q96VH3	125 aa		3.39	□□□□□ -1.87
ATG2	YNL242W	MTR2	P34232	184 aa	Known RBP	3.39	□□□□□ -1.87
ATG2	YNL242W	MOH1	P38191	138 aa		3.39	□□□□□ -1.87
ATG2	YNL242W	YER190C-B	P0CX94	160 aa		3.39	□□□□□ -1.87
ATG2	YNL242W	YEL077W-A	P0CX95	160 aa		3.39	□□□□□ -1.87

Retrieved 100 of 5,963 RNA–protein pairs in 17.2 ms