RNA–Protein interactions for RNA: YNL078W

NIS1, Transcript of Protein localized in the bud neck at G2/M phase, yeast

Gene NIS1, Length 1,224 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NIS1	YNL078W	YLR365W	Q7LIF2	110 aa		3.2	□□□□□ -1.9
NIS1	YNL078W	QCR9	P22289	66 aa		3.19	□□□□□ -1.9
NIS1	YNL078W	RAD23	P32628	398 aa	Known RBP	3.19	□□□□□ -1.9
NIS1	YNL078W	RPB7	P34087	171 aa		3.19	□□□□□ -1.9
NIS1	YNL078W	WSC4	P38739	605 aa		3.19	□□□□□ -1.9
NIS1	YNL078W	YAR068W	P39564	161 aa		3.19	□□□□□ -1.9
NIS1	YNL078W	COX15	P40086	486 aa		3.19	□□□□□ -1.9
NIS1	YNL078W	MOB1	P40484	314 aa		3.19	□□□□□ -1.9
NIS1	YNL078W	DFG10	P40526	253 aa		3.19	□□□□□ -1.9
NIS1	YNL078W	BRP1	P53194	125 aa		3.19	□□□□□ -1.9
NIS1	YNL078W	RIM9	Q04734	239 aa		3.19	□□□□□ -1.9
NIS1	YNL078W	SMT3	Q12306	101 aa	Known RBP	3.19	□□□□□ -1.9
NIS1	YNL078W	GEP5	Q12393	293 aa		3.19	□□□□□ -1.9
NIS1	YNL078W	YOR343C	Q12484	108 aa		3.19	□□□□□ -1.9
NIS1	YNL078W	YPR108W-A	Q3E7B3	70 aa		3.19	□□□□□ -1.9
NIS1	YNL078W	FLO9	P39712	1322 aa		3.19	□□□□□ -1.9
NIS1	YNL078W	INO4	P13902	151 aa		3.18	□□□□□ -1.9
NIS1	YNL078W	COX10	P21592	462 aa		3.18	□□□□□ -1.9
NIS1	YNL078W	HMX1	P32339	317 aa		3.18	□□□□□ -1.9
NIS1	YNL078W	QRI5	P32344	111 aa		3.18	□□□□□ -1.9
NIS1	YNL078W	ZRT1	P32804	376 aa		3.18	□□□□□ -1.9
NIS1	YNL078W	SRX1	P36077	127 aa		3.18	□□□□□ -1.9
NIS1	YNL078W	YHR138C	P38841	114 aa	Predicted RBP	3.18	□□□□□ -1.9
NIS1	YNL078W	CYB5	P40312	120 aa		3.18	□□□□□ -1.9
NIS1	YNL078W	CUP9	P41817	306 aa		3.18	□□□□□ -1.9
NIS1	YNL078W	YFR054C	P43622	192 aa		3.18	□□□□□ -1.9
NIS1	YNL078W	TDA4	P47153	279 aa		3.18	□□□□□ -1.9
NIS1	YNL078W	PCP1	P53259	346 aa		3.18	□□□□□ -1.9
NIS1	YNL078W	VPS71	Q03433	280 aa		3.18	□□□□□ -1.9
NIS1	YNL078W	BET5	Q03630	159 aa		3.18	□□□□□ -1.9
NIS1	YNL078W	MIM1	Q08176	113 aa		3.18	□□□□□ -1.9
NIS1	YNL078W	POC4	Q12245	148 aa	Predicted RBP	3.18	□□□□□ -1.9
NIS1	YNL078W	ISD11	Q6Q560	94 aa		3.18	□□□□□ -1.9
NIS1	YNL078W	ATG40	Q99325	256 aa		3.18	□□□□□ -1.9
NIS1	YNL078W	CDC39	P25655	2108 aa	Known RBP	3.17	□□□□□ -1.9
NIS1	YNL078W	ECM14	P38836	430 aa		3.17	□□□□□ -1.9
NIS1	YNL078W	MST28	P39552	234 aa		3.17	□□□□□ -1.9
NIS1	YNL078W	YFL065C	P43539	102 aa		3.17	□□□□□ -1.9
NIS1	YNL078W	MIC27	P50945	234 aa		3.17	□□□□□ -1.9
NIS1	YNL078W	YIP5	P53108	310 aa		3.17	□□□□□ -1.9
NIS1	YNL078W	YNR048W	P53740	393 aa		3.17	□□□□□ -1.9
NIS1	YNL078W	EOS1	P53938	366 aa		3.17	□□□□□ -1.9
NIS1	YNL078W	NCE101	Q02820	53 aa		3.17	□□□□□ -1.9
NIS1	YNL078W	DPP1	Q05521	289 aa		3.17	□□□□□ -1.9
NIS1	YNL078W	YOL118C	Q08259	102 aa		3.17	□□□□□ -1.9
NIS1	YNL078W	YPR203W	Q08994	102 aa		3.17	□□□□□ -1.9
NIS1	YNL078W	VPS68	Q12016	184 aa		3.17	□□□□□ -1.9
NIS1	YNL078W	MCP1	Q12106	302 aa		3.17	□□□□□ -1.9
NIS1	YNL078W	FOL3	Q12676	427 aa	Predicted RBP	3.17	□□□□□ -1.9
NIS1	YNL078W	YKR104W	P0CE69	306 aa		3.16	□□□□□ -1.9
NIS1	YNL078W	RPL12A	P0CX53	165 aa	Known RBP	3.16	□□□□□ -1.9
NIS1	YNL078W	RPL12B	P0CX54	165 aa		3.16	□□□□□ -1.9
NIS1	YNL078W	FCY2	P17064	533 aa		3.16	□□□□□ -1.9
NIS1	YNL078W	UGX2	P32772	223 aa		3.16	□□□□□ -1.9
NIS1	YNL078W	DER1	P38307	211 aa		3.16	□□□□□ -1.9
NIS1	YNL078W	YGP1	P38616	354 aa	Known RBP	3.16	□□□□□ -1.9
NIS1	YNL078W	LYS1	P38998	373 aa	RIP-Chip data	3.16	□□□□□ -1.9	not detected
NIS1	YNL078W	DSK2	P48510	373 aa		3.16	□□□□□ -1.9
NIS1	YNL078W	YGL118C	P53132	145 aa		3.16	□□□□□ -1.9
NIS1	YNL078W	POP3	P53833	195 aa	Predicted RBP	3.16	□□□□□ -1.9
NIS1	YNL078W	YMR181C	Q03231	154 aa		3.16	□□□□□ -1.9
NIS1	YNL078W	YPR098C	Q06089	161 aa		3.16	□□□□□ -1.9
NIS1	YNL078W	PAM18	Q07914	168 aa		3.16	□□□□□ -1.9
NIS1	YNL078W	TIM18	Q08749	192 aa		3.16	□□□□□ -1.9
NIS1	YNL078W	FIT3	Q08907	204 aa		3.16	□□□□□ -1.9
NIS1	YNL078W	PRP46	Q12417	451 aa	Predicted RBP	3.16	□□□□□ -1.9
NIS1	YNL078W	YPL229W	Q99395	206 aa		3.16	□□□□□ -1.9
NIS1	YNL078W	MRS1	P07266	363 aa		3.15	□□□□□ -1.91
NIS1	YNL078W	HMRA1	P0CY11	126 aa		3.15	□□□□□ -1.91
NIS1	YNL078W	MSI1	P13712	422 aa		3.15	□□□□□ -1.91
NIS1	YNL078W	SAG1	P20840	650 aa		3.15	□□□□□ -1.91
NIS1	YNL078W	SWD3	P38123	315 aa		3.15	□□□□□ -1.91
NIS1	YNL078W	YHR130C	P38834	111 aa		3.15	□□□□□ -1.91
NIS1	YNL078W	YHR180W	P38868	163 aa		3.15	□□□□□ -1.91
NIS1	YNL078W	SNF11	P38956	169 aa		3.15	□□□□□ -1.91
NIS1	YNL078W	PCL7	P40186	285 aa		3.15	□□□□□ -1.91
NIS1	YNL078W	OST1	P41543	476 aa	Known RBP	3.15	□□□□□ -1.91
NIS1	YNL078W	ARP3	P47117	449 aa	Known RBP	3.15	□□□□□ -1.91
NIS1	YNL078W	GEP7	P53171	287 aa		3.15	□□□□□ -1.91
NIS1	YNL078W	SDS23	P53172	527 aa		3.15	□□□□□ -1.91
NIS1	YNL078W	YGR050C	P53231	118 aa		3.15	□□□□□ -1.91
NIS1	YNL078W	YNR064C	P53750	290 aa		3.15	□□□□□ -1.91
NIS1	YNL078W	YML079W	Q03629	201 aa		3.15	□□□□□ -1.91
NIS1	YNL078W	YLR296W	Q05898	108 aa		3.15	□□□□□ -1.91
NIS1	YNL078W	GRE1	Q08969	168 aa		3.15	□□□□□ -1.91
NIS1	YNL078W	YDL180W	Q12301	547 aa		3.15	□□□□□ -1.91
NIS1	YNL078W	DFM1	Q12743	341 aa	Known RBP	3.15	□□□□□ -1.91
NIS1	YNL078W	YOR192C-C	Q3E736	78 aa		3.15	□□□□□ -1.91
NIS1	YNL078W	YLR361C-A	Q3E795	98 aa		3.15	□□□□□ -1.91
NIS1	YNL078W	GAL7	P08431	366 aa		3.14	□□□□□ -1.91
NIS1	YNL078W	RPL23A	P0CX41	137 aa	Known RBP	3.14	□□□□□ -1.91
NIS1	YNL078W	RPL23B	P0CX42	137 aa	Known RBP	3.14	□□□□□ -1.91
NIS1	YNL078W	TOA2	P32774	122 aa		3.14	□□□□□ -1.91
NIS1	YNL078W	SEC72	P39742	193 aa	Known RBP	3.14	□□□□□ -1.91
NIS1	YNL078W	HUA1	P40325	198 aa		3.14	□□□□□ -1.91
NIS1	YNL078W	OST2	P46964	130 aa		3.14	□□□□□ -1.91
NIS1	YNL078W	DYN2	Q02647	92 aa		3.14	□□□□□ -1.91
NIS1	YNL078W	MIX17	Q03667	156 aa		3.14	□□□□□ -1.91
NIS1	YNL078W	API2	Q04413	109 aa		3.14	□□□□□ -1.91
NIS1	YNL078W	YOL029C	Q08187	201 aa		3.14	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 30.7 ms