RNA–Protein interactions for RNA: YMR190C

SGS1, Transcript of RecQ family nucleolar DNA helicase, yeastyeast

Gene SGS1, Length 4,344 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SGS1YMR190C ATG8P38182 117 aaRIP-Chip data1.94□□□□□ -2.1not detected
SGS1YMR190C CDS1P38221 457 aa1.94□□□□□ -2.1
SGS1YMR190C YFL019CP43576 117 aa1.94□□□□□ -2.1
SGS1YMR190C CPD1P53314 239 aa1.94□□□□□ -2.1
SGS1YMR190C ATP23P53722 227 aa1.94□□□□□ -2.1
SGS1YMR190C UBC7Q02159 165 aa1.94□□□□□ -2.1
SGS1YMR190C YOP1Q12402 180 aa1.94□□□□□ -2.1
SGS1YMR190C SEC59P20048 519 aa1.93□□□□□ -2.1
SGS1YMR190C QCR9P22289 66 aa1.93□□□□□ -2.1
SGS1YMR190C QDR3P38227 689 aa1.93□□□□□ -2.1
SGS1YMR190C YDR114CQ04597 100 aa1.93□□□□□ -2.1
SGS1YMR190C YGL041C-BQ3E750 60 aa1.93□□□□□ -2.1
SGS1YMR190C RTC6O14464 93 aa1.93□□□□□ -2.1
SGS1YMR190C SOD1P00445 154 aaKnown RBP1.93□□□□□ -2.1
SGS1YMR190C RIB4P50861 169 aaPredicted RBP1.93□□□□□ -2.1
SGS1YMR190C YGL262WP53054 175 aa1.93□□□□□ -2.1
SGS1YMR190C YGR151CP53287 111 aa1.93□□□□□ -2.1
SGS1YMR190C YMR090WQ04304 227 aaKnown RBP1.93□□□□□ -2.1
SGS1YMR190C RPS11AP0CX47 156 aaKnown RBP1.93□□□□□ -2.1
SGS1YMR190C RPS11BP0CX48 156 aaKnown RBP1.93□□□□□ -2.1
SGS1YMR190C ERS1P17261 260 aa1.93□□□□□ -2.1
SGS1YMR190C LAC1P28496 418 aa1.93□□□□□ -2.1
SGS1YMR190C AVT5P38176 459 aa1.93□□□□□ -2.1
SGS1YMR190C YPT31P38555 223 aaKnown RBP1.93□□□□□ -2.1
SGS1YMR190C VMA21P41806 77 aa1.93□□□□□ -2.1
SGS1YMR190C MGA1P53050 456 aa1.93□□□□□ -2.1
SGS1YMR190C VTS1Q08831 523 aaKnown RBP RIP-Chip data1.93□□□□□ -2.1not detected
SGS1YMR190C RPS22AP0C0W1 130 aaKnown RBP1.93□□□□□ -2.1
SGS1YMR190C HYP2P23301 157 aaKnown RBP1.93□□□□□ -2.1
SGS1YMR190C CDC50P25656 391 aa1.93□□□□□ -2.1
SGS1YMR190C SDH8P38345 138 aa1.93□□□□□ -2.1
SGS1YMR190C SRP14P38985 146 aa1.93□□□□□ -2.1
SGS1YMR190C BOR1P53838 576 aa1.93□□□□□ -2.1
SGS1YMR190C YOR015WQ12169 119 aa1.93□□□□□ -2.1
SGS1YMR190C POC4Q12245 148 aaPredicted RBP1.93□□□□□ -2.1
SGS1YMR190C ADH3P07246 375 aaKnown RBP1.92□□□□□ -2.1
SGS1YMR190C PAU1P0CE88 120 aa1.92□□□□□ -2.1
SGS1YMR190C PAU14P0CE89 120 aa1.92□□□□□ -2.1
SGS1YMR190C PAU6P0CE90 120 aa1.92□□□□□ -2.1
SGS1YMR190C PAU18P0CE91 120 aa1.92□□□□□ -2.1
SGS1YMR190C PAU8P0CE92 120 aa1.92□□□□□ -2.1
SGS1YMR190C PAU11P0CE93 120 aa1.92□□□□□ -2.1
SGS1YMR190C YCR022CP25620 114 aa1.92□□□□□ -2.1
SGS1YMR190C MRPL4P36517 319 aa1.92□□□□□ -2.1
SGS1YMR190C CSH1P38287 376 aa1.92□□□□□ -2.1
SGS1YMR190C PAU13P38725 120 aa1.92□□□□□ -2.1
SGS1YMR190C YGR018CP53211 109 aa1.92□□□□□ -2.1
SGS1YMR190C YGR026WP53217 278 aa1.92□□□□□ -2.1
SGS1YMR190C PAU10Q03050 120 aa1.92□□□□□ -2.1
SGS1YMR190C PAU20Q08322 120 aa1.92□□□□□ -2.1
SGS1YMR190C FCF2Q12035 217 aaPredicted RBP1.92□□□□□ -2.1
SGS1YMR190C UTP23Q12339 254 aaKnown RBP1.92□□□□□ -2.1
SGS1YMR190C SNU23Q12368 194 aaPredicted RBP1.92□□□□□ -2.1
SGS1YMR190C PAU9Q3E770 120 aa1.92□□□□□ -2.1
SGS1YMR190C BPH1P25356 2167 aa1.92□□□□□ -2.1
SGS1YMR190C RPB3P16370 318 aaKnown RBP1.92□□□□□ -2.1
SGS1YMR190C RPL14AP36105 138 aaKnown RBP1.92□□□□□ -2.1
SGS1YMR190C RPL14BP38754 138 aaKnown RBP1.92□□□□□ -2.1
SGS1YMR190C GPI2P46961 280 aa1.92□□□□□ -2.1
SGS1YMR190C DYN2Q02647 92 aa1.92□□□□□ -2.1
SGS1YMR190C POF1P25576 258 aa1.92□□□□□ -2.1
SGS1YMR190C BDH1P39714 382 aa1.92□□□□□ -2.1
SGS1YMR190C PCL7P40186 285 aa1.92□□□□□ -2.1
SGS1YMR190C YMR007WQ03675 126 aa1.92□□□□□ -2.1
SGS1YMR190C ATO3Q12359 275 aa1.92□□□□□ -2.1
SGS1YMR190C SUR2P38992 349 aa1.91□□□□□ -2.1
SGS1YMR190C RRT13P40042 185 aa1.91□□□□□ -2.1
SGS1YMR190C GLE2P40066 365 aa1.91□□□□□ -2.1
SGS1YMR190C RPS25BP0C0T4 108 aaKnown RBP1.91□□□□□ -2.1
SGS1YMR190C SOH1P38633 127 aa1.91□□□□□ -2.1
SGS1YMR190C SAS2P40963 338 aa1.91□□□□□ -2.1
SGS1YMR190C NSE4P43124 402 aa1.91□□□□□ -2.1
SGS1YMR190C ATG27P46989 271 aa1.91□□□□□ -2.1
SGS1YMR190C LST7P53237 242 aa1.91□□□□□ -2.1
SGS1YMR190C OCA2P53949 197 aa1.91□□□□□ -2.1
SGS1YMR190C DIA1P54005 336 aa1.91□□□□□ -2.1
SGS1YMR190C RPS25AQ3E792 108 aaPredicted RBP1.91□□□□□ -2.1
SGS1YMR190C CMC2Q3E7A4 109 aa1.91□□□□□ -2.1
SGS1YMR190C PIS1P06197 220 aaKnown RBP1.91□□□□□ -2.1
SGS1YMR190C CDC7P06243 507 aa1.91□□□□□ -2.1
SGS1YMR190C PAU19P0CE85 124 aa1.91□□□□□ -2.1
SGS1YMR190C PAU21P0CE86 164 aa1.91□□□□□ -2.1
SGS1YMR190C PAU22P0CE87 164 aa1.91□□□□□ -2.1
SGS1YMR190C NHP6AP11632 93 aaKnown RBP1.91□□□□□ -2.1
SGS1YMR190C RNA15P25299 296 aaPredicted RBP1.91□□□□□ -2.1
SGS1YMR190C PAU3P25610 124 aa1.91□□□□□ -2.1
SGS1YMR190C CTR2P38865 189 aa1.91□□□□□ -2.1
SGS1YMR190C HSP10P38910 106 aa1.91□□□□□ -2.1
SGS1YMR190C SPI1P40092 148 aa1.91□□□□□ -2.1
SGS1YMR190C YML122CQ03207 126 aa1.91□□□□□ -2.1
SGS1YMR190C SHH3Q04487 196 aa1.91□□□□□ -2.1
SGS1YMR190C DXO1Q06349 442 aa1.91□□□□□ -2.1
SGS1YMR190C TIR1P10863 254 aa1.9□□□□□ -2.1
SGS1YMR190C FCY2P17064 533 aa1.9□□□□□ -2.1
SGS1YMR190C NSA2P40078 261 aaKnown RBP1.9□□□□□ -2.1
SGS1YMR190C IMP2P46972 177 aa1.9□□□□□ -2.1
SGS1YMR190C YNL234WP53857 426 aa1.9□□□□□ -2.1
SGS1YMR190C YMR166CQ03829 368 aa1.9□□□□□ -2.1
SGS1YMR190C ARR3Q06598 404 aa1.9□□□□□ -2.1
SGS1YMR190C CMC1P36064 111 aa1.9□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 52.4 ms