RNA–Protein interactions for RNA: YMR078C

CTF18, Transcript of Subunit of a complex with Ctf8p, yeastyeast

Gene CTF18, Length 2,226 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTF18YMR078C KIN28P06242 306 aa1.92□□□□□ -2.1
CTF18YMR078C HSP150P32478 413 aa1.92□□□□□ -2.1
CTF18YMR078C NMA1Q06178 401 aaKnown RBP1.91□□□□□ -2.1
CTF18YMR078C IRC19Q07843 230 aa1.91□□□□□ -2.1
CTF18YMR078C DCV1P43595 202 aa1.91□□□□□ -2.1
CTF18YMR078C FMN1Q03778 218 aa1.91□□□□□ -2.1
CTF18YMR078C PET54P10834 293 aa1.9□□□□□ -2.1
CTF18YMR078C RCF2P53721 224 aa1.9□□□□□ -2.1
CTF18YMR078C PRE1P22141 198 aaKnown RBP1.9□□□□□ -2.11
CTF18YMR078C IPI1P38803 334 aaPredicted RBP1.89□□□□□ -2.11
CTF18YMR078C CCW12Q12127 133 aa1.89□□□□□ -2.11
CTF18YMR078C FCY1Q12178 158 aa1.89□□□□□ -2.11
CTF18YMR078C MOG1P47123 218 aa1.89□□□□□ -2.11
CTF18YMR078C YDC1Q02896 317 aa1.88□□□□□ -2.11
CTF18YMR078C KEI1Q06346 221 aa1.88□□□□□ -2.11
CTF18YMR078C SCS22Q6Q595 175 aa1.87□□□□□ -2.11
CTF18YMR078C UBR1P19812 1950 aa1.87□□□□□ -2.11
CTF18YMR078C IPT1P38954 527 aa1.87□□□□□ -2.11
CTF18YMR078C YBR027CP38220 110 aa1.86□□□□□ -2.11
CTF18YMR078C APS3P47064 194 aa1.86□□□□□ -2.11
CTF18YMR078C YJR015WP47090 510 aa1.86□□□□□ -2.11
CTF18YMR078C EST3Q03096 181 aa1.86□□□□□ -2.11
CTF18YMR078C PKR1Q03880 122 aaKnown RBP1.86□□□□□ -2.11
CTF18YMR078C YMR320WQ04897 101 aa1.86□□□□□ -2.11
CTF18YMR078C YAR064WP39563 99 aa1.85□□□□□ -2.11
CTF18YMR078C RRT7Q07829 113 aa1.85□□□□□ -2.11
CTF18YMR078C ATG8P38182 117 aaRIP-Chip data1.83□□□□□ -2.12not detected
CTF18YMR078C RAV2Q03956 351 aa1.83□□□□□ -2.12
CTF18YMR078C UGX2P32772 223 aa1.83□□□□□ -2.12
CTF18YMR078C HSP12P22943 109 aaKnown RBP1.82□□□□□ -2.12
CTF18YMR078C CDC39P25655 2108 aaKnown RBP1.82□□□□□ -2.12
CTF18YMR078C YGR201CP42936 225 aa1.82□□□□□ -2.12
CTF18YMR078C YGL041W-AP0C5N3 154 aa1.82□□□□□ -2.12
CTF18YMR078C ECM31P38122 312 aa1.82□□□□□ -2.12
CTF18YMR078C YOR1P53049 1477 aa1.81□□□□□ -2.12
CTF18YMR078C COX5BP00425 151 aa1.81□□□□□ -2.12
CTF18YMR078C VAM10Q08474 114 aa1.8□□□□□ -2.12
CTF18YMR078C RPL37BP51402 88 aaKnown RBP1.79□□□□□ -2.12
CTF18YMR078C YPR153WQ06537 140 aa1.79□□□□□ -2.12
CTF18YMR078C HFA1P32874 2273 aa1.79□□□□□ -2.12
CTF18YMR078C YOL013W-AP0C272 63 aaPredicted RBP1.79□□□□□ -2.12
CTF18YMR078C ATP19P81451 68 aa1.78□□□□□ -2.12
CTF18YMR078C YCL001W-AP87012 153 aa1.78□□□□□ -2.12
CTF18YMR078C GPI11Q06636 219 aa1.78□□□□□ -2.12
CTF18YMR078C RIB3Q99258 208 aa1.78□□□□□ -2.12
CTF18YMR078C YIL102CP40488 101 aa1.78□□□□□ -2.13
CTF18YMR078C GPI2P46961 280 aa1.77□□□□□ -2.13
CTF18YMR078C YER188C-AP0C0V2 99 aa1.76□□□□□ -2.13
CTF18YMR078C TMA23Q03525 211 aa1.76□□□□□ -2.13
CTF18YMR078C YCR001WP25347 104 aa1.76□□□□□ -2.13
CTF18YMR078C DIE2P50076 525 aa1.76□□□□□ -2.13
CTF18YMR078C SEN15Q04675 128 aa1.76□□□□□ -2.13
CTF18YMR078C HYP2P23301 157 aaKnown RBP1.74□□□□□ -2.13
CTF18YMR078C FYV5P25585 152 aa1.74□□□□□ -2.13
CTF18YMR078C AIM36Q03798 255 aa1.74□□□□□ -2.13
CTF18YMR078C LSM1P47017 172 aaKnown RBP1.74□□□□□ -2.13
CTF18YMR078C NHP6AP11632 93 aaKnown RBP1.73□□□□□ -2.13
CTF18YMR078C RPS1BP23248 255 aaKnown RBP1.73□□□□□ -2.13
CTF18YMR078C RBL2P48606 106 aaKnown RBP1.72□□□□□ -2.13
CTF18YMR078C YDR366CP87287 132 aa1.72□□□□□ -2.13
CTF18YMR078C SED1Q01589 338 aa1.72□□□□□ -2.13
CTF18YMR078C SUI1P32911 108 aaKnown RBP1.71□□□□□ -2.14
CTF18YMR078C MON2P48563 1636 aaPredicted RBP1.71□□□□□ -2.14
CTF18YMR078C RPL33AP05744 107 aaKnown RBP1.71□□□□□ -2.14
CTF18YMR078C VMA10P48836 114 aaKnown RBP1.71□□□□□ -2.14
CTF18YMR078C COF1Q03048 143 aaKnown RBP1.7□□□□□ -2.14
CTF18YMR078C SOM1Q05676 74 aa1.7□□□□□ -2.14
CTF18YMR078C HSL1P34244 1518 aa1.7□□□□□ -2.14
CTF18YMR078C YOR385WQ08909 290 aa1.69□□□□□ -2.14
CTF18YMR078C MHF1Q3E835 90 aa1.69□□□□□ -2.14
CTF18YMR078C YGL014C-AP0C5N1 53 aa1.68□□□□□ -2.14
CTF18YMR078C PHB1P40961 287 aa1.68□□□□□ -2.14
CTF18YMR078C YNL122CP53921 115 aaPredicted RBP1.67□□□□□ -2.14
CTF18YMR078C HUT1Q12520 339 aa1.67□□□□□ -2.14
CTF18YMR078C TRS20P38334 175 aa1.67□□□□□ -2.14
CTF18YMR078C YHR140WP38842 239 aa1.67□□□□□ -2.14
CTF18YMR078C YAP3P38749 330 aa1.66□□□□□ -2.14
CTF18YMR078C ROM2P51862 1356 aaKnown RBP1.66□□□□□ -2.14
CTF18YMR078C HHY1P39982 102 aa1.66□□□□□ -2.14
CTF18YMR078C SPC3Q12133 184 aa1.65□□□□□ -2.15
CTF18YMR078C DDP1Q99321 188 aaKnown RBP1.65□□□□□ -2.15
CTF18YMR078C FMP49A0A023PZB3 126 aa1.64□□□□□ -2.15
CTF18YMR078C RPS1AP33442 255 aaKnown RBP1.64□□□□□ -2.15
CTF18YMR078C YGR039WP53225 103 aa1.64□□□□□ -2.15
CTF18YMR078C HHO1P53551 258 aa1.63□□□□□ -2.15
CTF18YMR078C LSM8P47093 109 aaKnown RBP1.63□□□□□ -2.15
CTF18YMR078C RPL40AP0CH08 128 aaKnown RBP1.61□□□□□ -2.15
CTF18YMR078C RPL40BP0CH09 128 aaKnown RBP1.61□□□□□ -2.15
CTF18YMR078C RPL14AP36105 138 aaKnown RBP1.61□□□□□ -2.15
CTF18YMR078C RPL14BP38754 138 aaKnown RBP1.61□□□□□ -2.15
CTF18YMR078C HPM1P40481 377 aa1.61□□□□□ -2.15
CTF18YMR078C HAP2P06774 265 aa1.6□□□□□ -2.15
CTF18YMR078C YMR122CQ03879 124 aa1.6□□□□□ -2.15
CTF18YMR078C RAF1Q06891 181 aa1.6□□□□□ -2.15
CTF18YMR078C PRM3Q08931 133 aa1.6□□□□□ -2.15
CTF18YMR078C FUN14P18411 198 aa1.6□□□□□ -2.15
CTF18YMR078C YNL019CP53975 284 aa1.6□□□□□ -2.15
CTF18YMR078C MGR2Q02889 113 aa1.6□□□□□ -2.15
CTF18YMR078C RPC19P28000 142 aaKnown RBP1.59□□□□□ -2.15
CTF18YMR078C YPL067CQ02754 198 aa1.59□□□□□ -2.16
Retrieved 100 of 5,963 RNA–protein pairs in 154.2 ms