RNA–Protein interactions for RNA: YMR039C

SUB1, Transcript of Transcriptional coactivator, yeastyeast

Gene SUB1, Length 879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SUB1YMR039C TY1B-PR2P0C2J0 1756 aa1.9□□□□□ -2.1
SUB1YMR039C SPA2P23201 1466 aaKnown RBP1.9□□□□□ -2.11
SUB1YMR039C FMP49A0A023PZB3 126 aa1.9□□□□□ -2.11
SUB1YMR039C YER039C-AP0CD97 72 aa1.9□□□□□ -2.11
SUB1YMR039C GPA2P10823 449 aa1.9□□□□□ -2.11
SUB1YMR039C MAK31P23059 88 aa1.9□□□□□ -2.11
SUB1YMR039C YHL018WP38744 120 aaPredicted RBP1.9□□□□□ -2.11
SUB1YMR039C YHR140WP38842 239 aa1.9□□□□□ -2.11
SUB1YMR039C YJL218WP40892 196 aaKnown RBP1.9□□□□□ -2.11
SUB1YMR039C SFT1P43682 97 aa1.9□□□□□ -2.11
SUB1YMR039C YGR017WP53210 297 aa1.9□□□□□ -2.11
SUB1YMR039C SAE3P89114 91 aa1.9□□□□□ -2.11
SUB1YMR039C YML079WQ03629 201 aa1.9□□□□□ -2.11
SUB1YMR039C UPS3Q04006 179 aa1.9□□□□□ -2.11
SUB1YMR039C RIM9Q04734 239 aa1.9□□□□□ -2.11
SUB1YMR039C YPR114WQ06107 315 aa1.9□□□□□ -2.11
SUB1YMR039C NKP2Q06162 153 aa1.9□□□□□ -2.11
SUB1YMR039C UIP4Q08926 304 aa1.9□□□□□ -2.11
SUB1YMR039C ATG41Q12048 136 aa1.9□□□□□ -2.11
SUB1YMR039C FCY1Q12178 158 aa1.9□□□□□ -2.11
SUB1YMR039C YCL001W-BQ96VH2 84 aa1.9□□□□□ -2.11
SUB1YMR039C TSC11P40061 1430 aa1.9□□□□□ -2.11
SUB1YMR039C MYO2P19524 1574 aaKnown RBP1.89□□□□□ -2.11
SUB1YMR039C UBR1P19812 1950 aa1.89□□□□□ -2.11
SUB1YMR039C YRF1-3P0CX14 1859 aa1.89□□□□□ -2.11
SUB1YMR039C YRF1-7P0CX15 1859 aa1.89□□□□□ -2.11
SUB1YMR039C YRF1-6P53819 1859 aa1.89□□□□□ -2.11
SUB1YMR039C MDM35O60200 86 aa1.89□□□□□ -2.11
SUB1YMR039C COX8P04039 78 aa1.89□□□□□ -2.11
SUB1YMR039C YOL162WP0CF19 215 aa1.89□□□□□ -2.11
SUB1YMR039C SRP21P32342 167 aa1.89□□□□□ -2.11
SUB1YMR039C YKR070WP36151 352 aaKnown RBP1.89□□□□□ -2.11
SUB1YMR039C YPT31P38555 223 aaKnown RBP1.89□□□□□ -2.11
SUB1YMR039C MOB1P40484 314 aa1.89□□□□□ -2.11
SUB1YMR039C GPI2P46961 280 aa1.89□□□□□ -2.11
SUB1YMR039C TMA23Q03525 211 aa1.89□□□□□ -2.11
SUB1YMR039C YHP1Q04116 353 aa1.89□□□□□ -2.11
SUB1YMR039C YHR007C-AQ07074 71 aa1.89□□□□□ -2.11
SUB1YMR039C RRT7Q07829 113 aa1.89□□□□□ -2.11
SUB1YMR039C YNL277W-AQ3E7Z0 62 aa1.89□□□□□ -2.11
SUB1YMR039C ESC1Q03661 1658 aaKnown RBP1.89□□□□□ -2.11
SUB1YMR039C HSP12P22943 109 aaKnown RBP1.88□□□□□ -2.11
SUB1YMR039C YBL010CP32788 280 aa1.88□□□□□ -2.11
SUB1YMR039C SHB17P36136 271 aaKnown RBP1.88□□□□□ -2.11
SUB1YMR039C RPS12P48589 143 aaKnown RBP1.88□□□□□ -2.11
SUB1YMR039C UPS1Q05776 175 aa1.88□□□□□ -2.11
SUB1YMR039C SPS2P08459 502 aa1.87□□□□□ -2.11
SUB1YMR039C INO4P13902 151 aa1.87□□□□□ -2.11
SUB1YMR039C RPL14AP36105 138 aaKnown RBP1.87□□□□□ -2.11
SUB1YMR039C ETR1P38071 380 aa1.87□□□□□ -2.11
SUB1YMR039C RPL14BP38754 138 aaKnown RBP1.87□□□□□ -2.11
SUB1YMR039C YNL019CP53975 284 aa1.87□□□□□ -2.11
SUB1YMR039C ATP19P81451 68 aa1.87□□□□□ -2.11
SUB1YMR039C AIM11P87275 137 aa1.87□□□□□ -2.11
SUB1YMR039C EST3Q03096 181 aa1.87□□□□□ -2.11
SUB1YMR039C YHR086W-AQ3E746 53 aa1.87□□□□□ -2.11
SUB1YMR039C YMR030W-AQ3E760 96 aa1.87□□□□□ -2.11
SUB1YMR039C YKL068W-AQ3E826 78 aa1.87□□□□□ -2.11
SUB1YMR039C MSB2P32334 1306 aa1.87□□□□□ -2.11
SUB1YMR039C TY1B-BRQ12193 1756 aa1.86□□□□□ -2.11
SUB1YMR039C STF2P16965 84 aa1.86□□□□□ -2.11
SUB1YMR039C DDR48P18899 430 aaKnown RBP1.86□□□□□ -2.11
SUB1YMR039C AHT1P29589 182 aa1.86□□□□□ -2.11
SUB1YMR039C YBR242WP38331 238 aa1.86□□□□□ -2.11
SUB1YMR039C HPA3P39979 161 aa1.86□□□□□ -2.11
SUB1YMR039C CCS1P40202 249 aaKnown RBP1.86□□□□□ -2.11
SUB1YMR039C YAE1P47118 141 aaPredicted RBP1.86□□□□□ -2.11
SUB1YMR039C ZEO1Q08245 113 aa1.86□□□□□ -2.11
SUB1YMR039C FLO9P39712 1322 aa1.86□□□□□ -2.11
SUB1YMR039C VAR1P02381 398 aa1.85□□□□□ -2.11
SUB1YMR039C HAP2P06774 265 aa1.85□□□□□ -2.11
SUB1YMR039C YGR269WP40326 108 aa1.85□□□□□ -2.11
SUB1YMR039C MPM1P40364 252 aa1.85□□□□□ -2.11
SUB1YMR039C GEP7P53171 287 aa1.85□□□□□ -2.11
SUB1YMR039C FIT2Q08906 153 aa1.85□□□□□ -2.11
SUB1YMR039C OCA6Q12454 224 aa1.85□□□□□ -2.11
SUB1YMR039C SCS22Q6Q595 175 aa1.85□□□□□ -2.11
SUB1YMR039C YLR422WQ06409 1932 aa1.85□□□□□ -2.11
SUB1YMR039C ADE6P38972 1358 aaKnown RBP1.85□□□□□ -2.11
SUB1YMR039C MRS4P23500 304 aa1.84□□□□□ -2.11
SUB1YMR039C RPB7P34087 171 aa1.84□□□□□ -2.11
SUB1YMR039C YKR045CP36138 183 aa1.84□□□□□ -2.11
SUB1YMR039C GAT4P40569 121 aa1.84□□□□□ -2.11
SUB1YMR039C YGL230CP53074 147 aa1.84□□□□□ -2.11
SUB1YMR039C YLR162WQ06235 118 aa1.84□□□□□ -2.11
SUB1YMR039C HUT1Q12520 339 aa1.84□□□□□ -2.11
SUB1YMR039C PDR11P40550 1411 aa1.83□□□□□ -2.12
SUB1YMR039C YBR219CP38317 127 aa1.83□□□□□ -2.12
SUB1YMR039C AIM18P38884 321 aa1.83□□□□□ -2.12
SUB1YMR039C YEL067CP39978 195 aa1.83□□□□□ -2.12
SUB1YMR039C RPL13BP40212 199 aaKnown RBP1.83□□□□□ -2.12
SUB1YMR039C FLX1P40464 311 aa1.83□□□□□ -2.12
SUB1YMR039C DIE2P50076 525 aa1.83□□□□□ -2.12
SUB1YMR039C SPG1P50088 95 aa1.83□□□□□ -2.12
SUB1YMR039C RCE1Q03530 315 aa1.83□□□□□ -2.12
SUB1YMR039C YLR042CQ07990 161 aa1.83□□□□□ -2.12
SUB1YMR039C YDL157CQ12082 118 aa1.83□□□□□ -2.12
SUB1YMR039C RPL13AQ12690 199 aaPredicted RBP1.83□□□□□ -2.12
SUB1YMR039C RPS25BP0C0T4 108 aaKnown RBP1.82□□□□□ -2.12
SUB1YMR039C SEC59P20048 519 aa1.82□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 77.2 ms