RNA–Protein interactions for RNA: YLR265C

NEJ1, Transcript of Protein involved in regulation of nonhomologous end joining, yeast

Gene NEJ1, Length 1,029 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NEJ1	YLR265C	SRP21	P32342	167 aa		1.09	□□□□□ -2.23
NEJ1	YLR265C	MRPL24	P36525	258 aa	Predicted RBP	1.09	□□□□□ -2.23
NEJ1	YLR265C	YJR015W	P47090	510 aa		1.09	□□□□□ -2.23
NEJ1	YLR265C	RFU1	Q08003	200 aa		1.09	□□□□□ -2.23
NEJ1	YLR265C	HSP150	P32478	413 aa		1.08	□□□□□ -2.24
NEJ1	YLR265C	YAR064W	P39563	99 aa		1.08	□□□□□ -2.24
NEJ1	YLR265C	YEL014C	P39999	101 aa		1.08	□□□□□ -2.24
NEJ1	YLR265C	APS3	P47064	194 aa		1.08	□□□□□ -2.24
NEJ1	YLR265C	FMN1	Q03778	218 aa		1.08	□□□□□ -2.24
NEJ1	YLR265C	NMA1	Q06178	401 aa	Known RBP	1.08	□□□□□ -2.24
NEJ1	YLR265C	KEI1	Q06346	221 aa		1.08	□□□□□ -2.24
NEJ1	YLR265C	IRC19	Q07843	230 aa		1.08	□□□□□ -2.24
NEJ1	YLR265C	FCY1	Q12178	158 aa		1.08	□□□□□ -2.24
NEJ1	YLR265C	DDR48	P18899	430 aa	Known RBP	1.07	□□□□□ -2.24
NEJ1	YLR265C	RCF2	P53721	224 aa		1.07	□□□□□ -2.24
NEJ1	YLR265C	YDC1	Q02896	317 aa		1.07	□□□□□ -2.24
NEJ1	YLR265C	UGX2	P32772	223 aa		1.06	□□□□□ -2.24
NEJ1	YLR265C	AIM36	Q03798	255 aa		1.06	□□□□□ -2.24
NEJ1	YLR265C	YBR027C	P38220	110 aa		1.05	□□□□□ -2.24
NEJ1	YLR265C	IPT1	P38954	527 aa		1.05	□□□□□ -2.24
NEJ1	YLR265C	YIL102C	P40488	101 aa		1.05	□□□□□ -2.24
NEJ1	YLR265C	SCS22	Q6Q595	175 aa		1.05	□□□□□ -2.24
NEJ1	YLR265C	YGL041W-A	P0C5N3	154 aa		1.04	□□□□□ -2.24
NEJ1	YLR265C	EST3	Q03096	181 aa		1.04	□□□□□ -2.24
NEJ1	YLR265C	RRT7	Q07829	113 aa		1.04	□□□□□ -2.24
NEJ1	YLR265C	PET54	P10834	293 aa		1.03	□□□□□ -2.24
NEJ1	YLR265C	ECM31	P38122	312 aa		1.03	□□□□□ -2.24
NEJ1	YLR265C	ATG8	P38182	117 aa	RIP-Chip data	1.03	□□□□□ -2.24	not detected
NEJ1	YLR265C	IPI1	P38803	334 aa	Predicted RBP	1.03	□□□□□ -2.24
NEJ1	YLR265C	MOG1	P47123	218 aa		1.03	□□□□□ -2.24
NEJ1	YLR265C	EFM5	P53200	248 aa	Known RBP	1.03	□□□□□ -2.24
NEJ1	YLR265C	TMA23	Q03525	211 aa		1.03	□□□□□ -2.24
NEJ1	YLR265C	VAM10	Q08474	114 aa		1.03	□□□□□ -2.24
NEJ1	YLR265C	YOL013W-A	P0C272	63 aa	Predicted RBP	1.02	□□□□□ -2.25
NEJ1	YLR265C	PKR1	Q03880	122 aa	Known RBP	1.02	□□□□□ -2.25
NEJ1	YLR265C	RAV2	Q03956	351 aa		1.02	□□□□□ -2.25
NEJ1	YLR265C	HSP12	P22943	109 aa	Known RBP	1.01	□□□□□ -2.25
NEJ1	YLR265C	YCR001W	P25347	104 aa		1.01	□□□□□ -2.25
NEJ1	YLR265C	ATP19	P81451	68 aa		1.01	□□□□□ -2.25
NEJ1	YLR265C	YPR153W	Q06537	140 aa		1.01	□□□□□ -2.25
NEJ1	YLR265C	RIB3	Q99258	208 aa		1.01	□□□□□ -2.25
NEJ1	YLR265C	UBR1	P19812	1950 aa		1	□□□□□ -2.25
NEJ1	YLR265C	COX5B	P00425	151 aa		1	□□□□□ -2.25
NEJ1	YLR265C	HYP2	P23301	157 aa	Known RBP	1	□□□□□ -2.25
NEJ1	YLR265C	YGR201C	P42936	225 aa		1	□□□□□ -2.25
NEJ1	YLR265C	GPI2	P46961	280 aa		1	□□□□□ -2.25
NEJ1	YLR265C	YMR320W	Q04897	101 aa		1	□□□□□ -2.25
NEJ1	YLR265C	GPI11	Q06636	219 aa		1	□□□□□ -2.25
NEJ1	YLR265C	YOR1	P53049	1477 aa		0.99	□□□□□ -2.25
NEJ1	YLR265C	SEN15	Q04675	128 aa		0.99	□□□□□ -2.25
NEJ1	YLR265C	NHP6A	P11632	93 aa	Known RBP	0.98	□□□□□ -2.25
NEJ1	YLR265C	VMA10	P48836	114 aa	Known RBP	0.98	□□□□□ -2.25
NEJ1	YLR265C	YCL001W-A	P87012	153 aa		0.98	□□□□□ -2.25
NEJ1	YLR265C	SED1	Q01589	338 aa		0.98	□□□□□ -2.25
NEJ1	YLR265C	HSL1	P34244	1518 aa		0.98	□□□□□ -2.25
NEJ1	YLR265C	FMP49	A0A023PZB3	126 aa		0.97	□□□□□ -2.25
NEJ1	YLR265C	FYV5	P25585	152 aa		0.97	□□□□□ -2.25
NEJ1	YLR265C	DIE2	P50076	525 aa		0.97	□□□□□ -2.25
NEJ1	YLR265C	RPL33A	P05744	107 aa	Known RBP	0.96	□□□□□ -2.26
NEJ1	YLR265C	HHY1	P39982	102 aa		0.96	□□□□□ -2.26
NEJ1	YLR265C	YNL122C	P53921	115 aa	Predicted RBP	0.96	□□□□□ -2.26
NEJ1	YLR265C	MHF1	Q3E835	90 aa		0.96	□□□□□ -2.26
NEJ1	YLR265C	RPS1B	P23248	255 aa	Known RBP	0.95	□□□□□ -2.26
NEJ1	YLR265C	SUI1	P32911	108 aa	Known RBP	0.95	□□□□□ -2.26
NEJ1	YLR265C	ROM2	P51862	1356 aa	Known RBP	0.95	□□□□□ -2.26
NEJ1	YLR265C	HAP2	P06774	265 aa		0.94	□□□□□ -2.26
NEJ1	YLR265C	YGL014C-A	P0C5N1	53 aa		0.94	□□□□□ -2.26
NEJ1	YLR265C	RBL2	P48606	106 aa	Known RBP	0.94	□□□□□ -2.26
NEJ1	YLR265C	YDR366C	P87287	132 aa		0.94	□□□□□ -2.26
NEJ1	YLR265C	SOM1	Q05676	74 aa		0.94	□□□□□ -2.26
NEJ1	YLR265C	LSM1	P47017	172 aa	Known RBP	0.93	□□□□□ -2.26
NEJ1	YLR265C	COF1	Q03048	143 aa	Known RBP	0.93	□□□□□ -2.26
NEJ1	YLR265C	HUT1	Q12520	339 aa		0.93	□□□□□ -2.26
NEJ1	YLR265C	CDC39	P25655	2108 aa	Known RBP	0.92	□□□□□ -2.26
NEJ1	YLR265C	PHB1	P40961	287 aa		0.92	□□□□□ -2.26
NEJ1	YLR265C	MGR2	Q02889	113 aa		0.92	□□□□□ -2.26
NEJ1	YLR265C	YOR385W	Q08909	290 aa		0.92	□□□□□ -2.26
NEJ1	YLR265C	YMR122C	Q03879	124 aa		0.91	□□□□□ -2.26
NEJ1	YLR265C	YOR072W	Q08486	104 aa		0.91	□□□□□ -2.26
NEJ1	YLR265C	YHR213W-B	Q8TGK1	99 aa		0.91	□□□□□ -2.26
NEJ1	YLR265C	DDP1	Q99321	188 aa	Known RBP	0.91	□□□□□ -2.26
NEJ1	YLR265C	HFA1	P32874	2273 aa		0.91	□□□□□ -2.26
NEJ1	YLR265C	RPS22A	P0C0W1	130 aa	Known RBP	0.9	□□□□□ -2.27
NEJ1	YLR265C	RPL40A	P0CH08	128 aa	Known RBP	0.9	□□□□□ -2.27
NEJ1	YLR265C	RPL40B	P0CH09	128 aa	Known RBP	0.9	□□□□□ -2.27
NEJ1	YLR265C	YHR140W	P38842	239 aa		0.9	□□□□□ -2.27
NEJ1	YLR265C	LSM8	P47093	109 aa	Known RBP	0.9	□□□□□ -2.27
NEJ1	YLR265C	YGR039W	P53225	103 aa		0.9	□□□□□ -2.27
NEJ1	YLR265C	HHO1	P53551	258 aa		0.9	□□□□□ -2.27
NEJ1	YLR265C	YNL019C	P53975	284 aa		0.9	□□□□□ -2.27
NEJ1	YLR265C	SPC3	Q12133	184 aa		0.9	□□□□□ -2.27
NEJ1	YLR265C	RPS22B	Q3E7Y3	130 aa	Known RBP	0.9	□□□□□ -2.27
NEJ1	YLR265C	FUN14	P18411	198 aa		0.89	□□□□□ -2.27
NEJ1	YLR265C	RPS1A	P33442	255 aa	Known RBP	0.89	□□□□□ -2.27
NEJ1	YLR265C	YAP3	P38749	330 aa		0.89	□□□□□ -2.27
NEJ1	YLR265C	RAF1	Q06891	181 aa		0.89	□□□□□ -2.27
NEJ1	YLR265C	PRM3	Q08931	133 aa		0.89	□□□□□ -2.27
NEJ1	YLR265C	RPC19	P28000	142 aa	Known RBP	0.88	□□□□□ -2.27
NEJ1	YLR265C	LST8	P41318	303 aa		0.88	□□□□□ -2.27
NEJ1	YLR265C	SPG1	P50088	95 aa		0.88	□□□□□ -2.27

Retrieved 100 of 5,963 RNA–protein pairs in 7.5 ms