RNA–Protein interactions for RNA: YLR132C

USB1, Transcript of Putative phosphodiesterase specific for U6 snRNA 3' end modification, yeastyeast

Gene USB1, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
USB1YLR132C GPI17Q04080 534 aa2.29□□□□□ -2.04
USB1YLR132C GGA1Q06336 557 aa2.29□□□□□ -2.04
USB1YLR132C SPC3Q12133 184 aa2.29□□□□□ -2.04
USB1YLR132C RPL25P04456 142 aaKnown RBP2.28□□□□□ -2.04
USB1YLR132C SRP102P36057 244 aaPredicted RBP2.28□□□□□ -2.04
USB1YLR132C DSE2P38844 325 aa2.28□□□□□ -2.04
USB1YLR132C HPM1P40481 377 aa2.28□□□□□ -2.04
USB1YLR132C BMT5P40493 336 aa2.28□□□□□ -2.04
USB1YLR132C XPT1P47165 209 aa2.28□□□□□ -2.04
USB1YLR132C YGL101WP53144 215 aa2.28□□□□□ -2.04
USB1YLR132C HHT1P61830 136 aa2.28□□□□□ -2.04
USB1YLR132C DYN3Q04949 312 aa2.28□□□□□ -2.04
USB1YLR132C TSC3Q3E790 80 aa2.28□□□□□ -2.04
USB1YLR132C HTB1P02293 131 aaKnown RBP2.27□□□□□ -2.05
USB1YLR132C HTB2P02294 131 aa2.27□□□□□ -2.05
USB1YLR132C YHR212W-AP0CX91 67 aa2.27□□□□□ -2.05
USB1YLR132C TIR3P40552 269 aa2.27□□□□□ -2.05
USB1YLR132C RFU1Q08003 200 aa2.27□□□□□ -2.05
USB1YLR132C MHF2Q3E829 80 aa2.27□□□□□ -2.05
USB1YLR132C PHO85P17157 305 aa2.26□□□□□ -2.05
USB1YLR132C ATP7P30902 174 aa2.26□□□□□ -2.05
USB1YLR132C SVP26P38869 228 aa2.26□□□□□ -2.05
USB1YLR132C YNL033WP53964 284 aa2.26□□□□□ -2.05
USB1YLR132C YNL019CP53975 284 aa2.26□□□□□ -2.05
USB1YLR132C YPL067CQ02754 198 aa2.26□□□□□ -2.05
USB1YLR132C GPI11Q06636 219 aa2.26□□□□□ -2.05
USB1YLR132C CDC7P06243 507 aa2.25□□□□□ -2.05
USB1YLR132C RPL30P14120 105 aaKnown RBP2.25□□□□□ -2.05
USB1YLR132C SNC2P33328 115 aa2.25□□□□□ -2.05
USB1YLR132C TMA19P35691 167 aaKnown RBP2.25□□□□□ -2.05
USB1YLR132C ECM31P38122 312 aa2.25□□□□□ -2.05
USB1YLR132C BUD25P85052 153 aa2.25□□□□□ -2.05
USB1YLR132C FCY1Q12178 158 aa2.25□□□□□ -2.05
USB1YLR132C ADF1Q2V2Q1 113 aa2.25□□□□□ -2.05
USB1YLR132C URA5P13298 226 aaKnown RBP2.24□□□□□ -2.05
USB1YLR132C MAG1P22134 296 aaKnown RBP2.24□□□□□ -2.05
USB1YLR132C BET1P22804 142 aa2.24□□□□□ -2.05
USB1YLR132C UMP1P38293 148 aa2.24□□□□□ -2.05
USB1YLR132C RPS20P38701 121 aaKnown RBP2.24□□□□□ -2.05
USB1YLR132C YNL217WP40152 326 aa2.24□□□□□ -2.05
USB1YLR132C VPS55P47111 140 aa2.24□□□□□ -2.05
USB1YLR132C CCC1P47818 322 aa2.24□□□□□ -2.05
USB1YLR132C LSM7P53905 115 aaKnown RBP2.24□□□□□ -2.05
USB1YLR132C HOR7Q05827 59 aa2.24□□□□□ -2.05
USB1YLR132C YOR289WQ12012 251 aaPredicted RBP2.24□□□□□ -2.05
USB1YLR132C YPL162CQ12042 273 aa2.24□□□□□ -2.05
USB1YLR132C RIB3Q99258 208 aa2.24□□□□□ -2.05
USB1YLR132C DDI2P0CH63 225 aa2.23□□□□□ -2.05
USB1YLR132C DDI3P0CH64 225 aa2.23□□□□□ -2.05
USB1YLR132C RFA3P26755 122 aaKnown RBP2.23□□□□□ -2.05
USB1YLR132C SPS18P32572 300 aa2.23□□□□□ -2.05
USB1YLR132C IPT1P38954 527 aa2.23□□□□□ -2.05
USB1YLR132C YKR005CQ02203 525 aa2.23□□□□□ -2.05
USB1YLR132C ELP6Q04868 273 aa2.23□□□□□ -2.05
USB1YLR132C SEC4P07560 215 aaKnown RBP2.22□□□□□ -2.05
USB1YLR132C GVP36P40531 326 aaKnown RBP2.22□□□□□ -2.05
USB1YLR132C NQM1P53228 333 aaPredicted RBP2.22□□□□□ -2.05
USB1YLR132C YGR050CP53231 118 aa2.22□□□□□ -2.05
USB1YLR132C PGA1P53896 198 aa2.22□□□□□ -2.05
USB1YLR132C NRK1P53915 240 aa2.22□□□□□ -2.05
USB1YLR132C GAL83Q04739 417 aa2.22□□□□□ -2.05
USB1YLR132C PRM3Q08931 133 aa2.22□□□□□ -2.05
USB1YLR132C MPD1Q12404 318 aaKnown RBP2.22□□□□□ -2.05
USB1YLR132C RPL27AP0C2H6 136 aaKnown RBP2.21□□□□□ -2.06
USB1YLR132C RPL27BP0C2H7 136 aaKnown RBP2.21□□□□□ -2.06
USB1YLR132C CKS1P20486 150 aaKnown RBP2.21□□□□□ -2.06
USB1YLR132C TTI2P47168 421 aa2.21□□□□□ -2.06
USB1YLR132C COG5P53951 403 aa2.21□□□□□ -2.06
USB1YLR132C YHP1Q04116 353 aa2.21□□□□□ -2.06
USB1YLR132C UPS1Q05776 175 aa2.21□□□□□ -2.06
USB1YLR132C SNF4P12904 322 aa2.2□□□□□ -2.06
USB1YLR132C CPR5P35176 225 aa2.2□□□□□ -2.06
USB1YLR132C UTP30P36144 274 aaKnown RBP2.2□□□□□ -2.06
USB1YLR132C YRB2P40517 327 aa2.2□□□□□ -2.06
USB1YLR132C DOC1P53068 250 aa2.2□□□□□ -2.06
USB1YLR132C SAY1P53324 424 aa2.2□□□□□ -2.06
USB1YLR132C YDR274CP87283 123 aa2.2□□□□□ -2.06
USB1YLR132C KIN28P06242 306 aa2.19□□□□□ -2.06
USB1YLR132C TFC1P32367 649 aa2.19□□□□□ -2.06
USB1YLR132C RIO2P40160 425 aaKnown RBP2.19□□□□□ -2.06
USB1YLR132C AIM25P47140 327 aa2.19□□□□□ -2.06
USB1YLR132C SOL1P50278 321 aa2.19□□□□□ -2.06
USB1YLR132C HUT1Q12520 339 aa2.19□□□□□ -2.06
USB1YLR132C RPB3P16370 318 aaKnown RBP2.18□□□□□ -2.06
USB1YLR132C STF2P16965 84 aa2.18□□□□□ -2.06
USB1YLR132C FZF1P32805 299 aa2.18□□□□□ -2.06
USB1YLR132C YBR285WP38354 144 aa2.18□□□□□ -2.06
USB1YLR132C MPC2P38857 129 aa2.18□□□□□ -2.06
USB1YLR132C DLS1P40366 167 aa2.18□□□□□ -2.06
USB1YLR132C YFR035CP43608 114 aa2.18□□□□□ -2.06
USB1YLR132C ERJ5P43613 295 aaPredicted RBP2.18□□□□□ -2.06
USB1YLR132C MMS2P53152 137 aa2.18□□□□□ -2.06
USB1YLR132C HSK3P69852 69 aa2.18□□□□□ -2.06
USB1YLR132C YOL160WQ08321 113 aa2.18□□□□□ -2.06
USB1YLR132C YKL068W-AQ3E826 78 aa2.18□□□□□ -2.06
USB1YLR132C YFR032C-BQ8TGU2 87 aa2.18□□□□□ -2.06
USB1YLR132C ADK1P07170 222 aaKnown RBP2.17□□□□□ -2.06
USB1YLR132C ECM4P36156 370 aa2.17□□□□□ -2.06
USB1YLR132C SRL3P36167 246 aa2.17□□□□□ -2.06
USB1YLR132C YBR209WP38311 105 aa2.17□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms