RNA–Protein interactions for RNA: YLL039C

UBI4, Transcript of Ubiquitin, yeastyeast

Gene UBI4, Length 1,146 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBI4YLL039C YGR296C-BP0CX96 160 aa3.7□□□□□ -1.82
UBI4YLL039C YPL283W-BP0CX97 160 aa3.7□□□□□ -1.82
UBI4YLL039C YPR204C-AP0CX98 160 aa3.7□□□□□ -1.82
UBI4YLL039C RPB9P27999 122 aa3.7□□□□□ -1.82
UBI4YLL039C RPB7P34087 171 aa3.7□□□□□ -1.82
UBI4YLL039C SWD2P36104 329 aaPredicted RBP3.7□□□□□ -1.82
UBI4YLL039C PRY2P36110 329 aa3.7□□□□□ -1.82
UBI4YLL039C ICS2P38284 255 aa3.7□□□□□ -1.82
UBI4YLL039C PCL7P40186 285 aa3.7□□□□□ -1.82
UBI4YLL039C PRM5P40476 318 aa3.7□□□□□ -1.82
UBI4YLL039C MIC27P50945 234 aa3.7□□□□□ -1.82
UBI4YLL039C WSC2P53832 503 aa3.7□□□□□ -1.82
UBI4YLL039C RPL15BP54780 204 aaPredicted RBP3.7□□□□□ -1.82
UBI4YLL039C RPL21AQ02753 160 aaKnown RBP3.7□□□□□ -1.82
UBI4YLL039C ELC1Q03071 99 aa3.7□□□□□ -1.82
UBI4YLL039C YMR082CQ04276 118 aa3.7□□□□□ -1.82
UBI4YLL039C YMR317WQ04893 1140 aa3.7□□□□□ -1.82
UBI4YLL039C ADH6Q04894 360 aaKnown RBP3.7□□□□□ -1.82
UBI4YLL039C PRP11Q07350 266 aaPredicted RBP3.7□□□□□ -1.82
UBI4YLL039C FSF1Q12029 327 aaKnown RBP3.7□□□□□ -1.82
UBI4YLL039C YPL162CQ12042 273 aa3.7□□□□□ -1.82
UBI4YLL039C YDL157CQ12082 118 aa3.7□□□□□ -1.82
UBI4YLL039C RPL21BQ12672 160 aaKnown RBP3.7□□□□□ -1.82
UBI4YLL039C RPS22BQ3E7Y3 130 aaKnown RBP3.7□□□□□ -1.82
UBI4YLL039C YLR365WQ7LIF2 110 aa3.7□□□□□ -1.82
UBI4YLL039C FMP49A0A023PZB3 126 aa3.69□□□□□ -1.82
UBI4YLL039C MBF1O14467 151 aaKnown RBP3.69□□□□□ -1.82
UBI4YLL039C RPS22AP0C0W1 130 aaKnown RBP3.69□□□□□ -1.82
UBI4YLL039C OLE1P21147 510 aaKnown RBP3.69□□□□□ -1.82
UBI4YLL039C QCR9P22289 66 aa3.69□□□□□ -1.82
UBI4YLL039C RAD23P32628 398 aaKnown RBP3.69□□□□□ -1.82
UBI4YLL039C YUH1P35127 236 aa3.69□□□□□ -1.82
UBI4YLL039C SOR1P35497 357 aaKnown RBP3.69□□□□□ -1.82
UBI4YLL039C SHB17P36136 271 aaKnown RBP3.69□□□□□ -1.82
UBI4YLL039C CDC40P40968 455 aaPredicted RBP3.69□□□□□ -1.82
UBI4YLL039C YFL015CP43578 164 aa3.69□□□□□ -1.82
UBI4YLL039C RPA43P46669 326 aa3.69□□□□□ -1.82
UBI4YLL039C UBC11P52492 156 aa3.69□□□□□ -1.82
UBI4YLL039C ALG9P53868 555 aaKnown RBP3.69□□□□□ -1.82
UBI4YLL039C RIM9Q04734 239 aa3.69□□□□□ -1.82
UBI4YLL039C SCW10Q04951 389 aa3.69□□□□□ -1.82
UBI4YLL039C FSH2Q05015 223 aa3.69□□□□□ -1.82
UBI4YLL039C YDR286CQ05530 114 aa3.69□□□□□ -1.82
UBI4YLL039C STP4Q07351 490 aa3.69□□□□□ -1.82
UBI4YLL039C SOR2Q07786 357 aa3.69□□□□□ -1.82
UBI4YLL039C YOL118CQ08259 102 aa3.69□□□□□ -1.82
UBI4YLL039C YOR304C-AO14468 76 aa3.68□□□□□ -1.82
UBI4YLL039C HYP2P23301 157 aaKnown RBP3.68□□□□□ -1.82
UBI4YLL039C UPS2P35200 230 aa3.68□□□□□ -1.82
UBI4YLL039C ADH5P38113 351 aaKnown RBP3.68□□□□□ -1.82
UBI4YLL039C CYB5P40312 120 aa3.68□□□□□ -1.82
UBI4YLL039C YAR1P46683 200 aa3.68□□□□□ -1.82
UBI4YLL039C COX18P53239 316 aa3.68□□□□□ -1.82
UBI4YLL039C YNR071CP53757 342 aa3.68□□□□□ -1.82
UBI4YLL039C BOR1P53838 576 aa3.68□□□□□ -1.82
UBI4YLL039C UPS3Q04006 179 aa3.68□□□□□ -1.82
UBI4YLL039C IZH3Q07959 543 aa3.68□□□□□ -1.82
UBI4YLL039C YLR050CQ12155 161 aaKnown RBP3.68□□□□□ -1.82
UBI4YLL039C TPT1Q12272 230 aaKnown RBP3.68□□□□□ -1.82
UBI4YLL039C SME1Q12330 94 aaPredicted RBP3.68□□□□□ -1.82
UBI4YLL039C YIR021W-AQ3E739 70 aa3.68□□□□□ -1.82
UBI4YLL039C YLR363W-AQ3E747 85 aa3.68□□□□□ -1.82
UBI4YLL039C YPR108W-AQ3E7B3 70 aa3.68□□□□□ -1.82
UBI4YLL039C UBA3Q99344 299 aa3.68□□□□□ -1.82
UBI4YLL039C CCW14O13547 238 aa3.67□□□□□ -1.82
UBI4YLL039C SPS18P32572 300 aa3.67□□□□□ -1.82
UBI4YLL039C MSL1P40567 111 aaPredicted RBP3.67□□□□□ -1.82
UBI4YLL039C GPI2P46961 280 aa3.67□□□□□ -1.82
UBI4YLL039C UBP8P50102 471 aa3.67□□□□□ -1.82
UBI4YLL039C YGL118CP53132 145 aa3.67□□□□□ -1.82
UBI4YLL039C DUG3P53871 357 aa3.67□□□□□ -1.82
UBI4YLL039C YMR090WQ04304 227 aaKnown RBP3.67□□□□□ -1.82
UBI4YLL039C YOR292CQ08743 309 aa3.67□□□□□ -1.82
UBI4YLL039C SWT1Q12104 458 aa3.67□□□□□ -1.82
UBI4YLL039C YOR015WQ12169 119 aa3.67□□□□□ -1.82
UBI4YLL039C ERV2Q12284 196 aa3.67□□□□□ -1.82
UBI4YLL039C PRR2Q12310 699 aa3.67□□□□□ -1.82
UBI4YLL039C WIP1Q2V2P8 89 aa3.67□□□□□ -1.82
UBI4YLL039C YLR302CO13544 120 aa3.66□□□□□ -1.82
UBI4YLL039C POR1P04840 283 aaKnown RBP3.66□□□□□ -1.82
UBI4YLL039C RPL12AP0CX53 165 aaKnown RBP3.66□□□□□ -1.82
UBI4YLL039C RPL12BP0CX54 165 aa3.66□□□□□ -1.82
UBI4YLL039C HMRA1P0CY11 126 aa3.66□□□□□ -1.82
UBI4YLL039C BDH1P39714 382 aa3.66□□□□□ -1.82
UBI4YLL039C YER188WP40103 239 aa3.66□□□□□ -1.82
UBI4YLL039C PRE5P40302 234 aaKnown RBP3.66□□□□□ -1.82
UBI4YLL039C YJL118WP47022 219 aa3.66□□□□□ -1.82
UBI4YLL039C YGL230CP53074 147 aa3.66□□□□□ -1.82
UBI4YLL039C LST7P53237 242 aa3.66□□□□□ -1.82
UBI4YLL039C DAD3P69850 94 aa3.66□□□□□ -1.82
UBI4YLL039C TSA2Q04120 196 aa3.66□□□□□ -1.82
UBI4YLL039C YFH1Q07540 174 aa3.66□□□□□ -1.82
UBI4YLL039C YPL264CQ08980 353 aa3.66□□□□□ -1.82
UBI4YLL039C YKL023C-AQ2V2P3 75 aa3.66□□□□□ -1.82
UBI4YLL039C HUG1Q6Q5K6 68 aa3.66□□□□□ -1.82
UBI4YLL039C ECM33P38248 429 aaKnown RBP3.65□□□□□ -1.83
UBI4YLL039C TEM1P38987 245 aa3.65□□□□□ -1.83
UBI4YLL039C SNU13P39990 126 aaKnown RBP3.65□□□□□ -1.83
UBI4YLL039C HAC1P41546 238 aa3.65□□□□□ -1.83
UBI4YLL039C YJR015WP47090 510 aa3.65□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 7.9 ms