RNA–Protein interactions for RNA: YKR040C

YKR040C, Transcript of Dubious open reading frame, yeastyeast

Gene YKR040C, Length 504 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YKR040CYKR040C RPB3P16370 318 aaKnown RBP8.75□□□□□ -1.01
YKR040CYKR040C YPR063CQ12160 140 aa8.75□□□□□ -1.01
YKR040CYKR040C FMP16Q12497 93 aa8.75□□□□□ -1.01
YKR040CYKR040C MRS1P07266 363 aa8.74□□□□□ -1.01
YKR040CYKR040C MSK1P32048 576 aa8.74□□□□□ -1.01
YKR040CYKR040C RPS0AP32905 252 aaKnown RBP8.74□□□□□ -1.01
YKR040CYKR040C NNK1P36003 928 aa8.74□□□□□ -1.01
YKR040CYKR040C MIG3P39943 394 aa8.74□□□□□ -1.01
YKR040CYKR040C FMP41P53889 259 aaKnown RBP8.74□□□□□ -1.01
YKR040CYKR040C MRPS8Q03799 155 aa8.74□□□□□ -1.01
YKR040CYKR040C ERV2Q12284 196 aa8.74□□□□□ -1.01
YKR040CYKR040C HMX1P32339 317 aa8.73□□□□□ -1.01
YKR040CYKR040C RIB5P38145 238 aa8.73□□□□□ -1.01
YKR040CYKR040C YHR173CP38864 112 aa8.73□□□□□ -1.01
YKR040CYKR040C HUA1P40325 198 aa8.73□□□□□ -1.01
YKR040CYKR040C MCM22P47167 239 aa8.73□□□□□ -1.01
YKR040CYKR040C TOM7P53507 60 aa8.73□□□□□ -1.01
YKR040CYKR040C PAU1P0CE88 120 aa8.72□□□□□ -1.01
YKR040CYKR040C PAU14P0CE89 120 aa8.72□□□□□ -1.01
YKR040CYKR040C PAU6P0CE90 120 aa8.72□□□□□ -1.01
YKR040CYKR040C PAU18P0CE91 120 aa8.72□□□□□ -1.01
YKR040CYKR040C PAU8P0CE92 120 aa8.72□□□□□ -1.01
YKR040CYKR040C PAU11P0CE93 120 aa8.72□□□□□ -1.01
YKR040CYKR040C RNA15P25299 296 aaPredicted RBP8.72□□□□□ -1.01
YKR040CYKR040C PAU13P38725 120 aa8.72□□□□□ -1.01
YKR040CYKR040C PAU10Q03050 120 aa8.72□□□□□ -1.01
YKR040CYKR040C PAU20Q08322 120 aa8.72□□□□□ -1.01
YKR040CYKR040C PAU9Q3E770 120 aa8.72□□□□□ -1.01
YKR040CYKR040C HTB2P02294 131 aa8.71□□□□□ -1.02
YKR040CYKR040C MRPL20P22354 195 aaPredicted RBP8.71□□□□□ -1.02
YKR040CYKR040C SNN1P48232 102 aa8.71□□□□□ -1.02
YKR040CYKR040C UBC12P52491 188 aa8.71□□□□□ -1.02
YKR040CYKR040C RDS3Q06835 107 aaPredicted RBP8.71□□□□□ -1.02
YKR040CYKR040C STP4Q07351 490 aa8.71□□□□□ -1.02
YKR040CYKR040C VMA7P39111 118 aa8.7□□□□□ -1.02
YKR040CYKR040C CCW12Q12127 133 aa8.7□□□□□ -1.02
YKR040CYKR040C YHR022CP38763 256 aa8.69□□□□□ -1.02
YKR040CYKR040C RAV2Q03956 351 aa8.69□□□□□ -1.02
YKR040CYKR040C RPL31BP0C2H9 113 aaKnown RBP8.68□□□□□ -1.02
YKR040CYKR040C RPS11AP0CX47 156 aaKnown RBP8.66□□□□□ -1.02
YKR040CYKR040C RPS11BP0CX48 156 aaKnown RBP8.66□□□□□ -1.02
YKR040CYKR040C YIL163CP40448 117 aa8.66□□□□□ -1.02
YKR040CYKR040C YJR096WP47137 282 aa8.66□□□□□ -1.02
YKR040CYKR040C ATP14Q12349 124 aa8.66□□□□□ -1.02
YKR040CYKR040C YLR302CO13544 120 aa8.65□□□□□ -1.02
YKR040CYKR040C RPS22AP0C0W1 130 aaKnown RBP8.65□□□□□ -1.02
YKR040CYKR040C RPL2AP0CX45 254 aaKnown RBP8.65□□□□□ -1.02
YKR040CYKR040C RPL2BP0CX46 254 aaKnown RBP8.65□□□□□ -1.02
YKR040CYKR040C CYB5P40312 120 aa8.65□□□□□ -1.02
YKR040CYKR040C TMA17Q12513 150 aa8.65□□□□□ -1.02
YKR040CYKR040C CYC7P00045 113 aa8.64□□□□□ -1.03
YKR040CYKR040C CPT1P17898 393 aa8.64□□□□□ -1.03
YKR040CYKR040C AFR1P33304 620 aa8.64□□□□□ -1.03
YKR040CYKR040C YMR141CP40211 102 aa8.64□□□□□ -1.03
YKR040CYKR040C DAD4P69851 72 aa8.64□□□□□ -1.03
YKR040CYKR040C YOL085CQ99345 113 aa8.64□□□□□ -1.03
YKR040CYKR040C ECM25P32525 599 aa8.63□□□□□ -1.03
YKR040CYKR040C AME1P38313 324 aa8.63□□□□□ -1.03
YKR040CYKR040C SPI1P40092 148 aa8.63□□□□□ -1.03
YKR040CYKR040C YPT10P38146 199 aa8.62□□□□□ -1.03
YKR040CYKR040C YFR035CP43608 114 aa8.62□□□□□ -1.03
YKR040CYKR040C DAD1Q12248 94 aa8.62□□□□□ -1.03
YKR040CYKR040C COQ3P27680 312 aa8.61□□□□□ -1.03
YKR040CYKR040C VMA9Q3E7B6 73 aa8.61□□□□□ -1.03
YKR040CYKR040C PCC1Q3E833 88 aa8.61□□□□□ -1.03
YKR040CYKR040C YCR001WP25347 104 aa8.6□□□□□ -1.03
YKR040CYKR040C YDR215CQ12240 137 aa8.6□□□□□ -1.03
YKR040CYKR040C MDN1Q12019 4910 aaKnown RBP8.6□□□□□ -1.03
YKR040CYKR040C LDS1P31379 325 aa8.59□□□□□ -1.03
YKR040CYKR040C SRB6P32570 121 aa8.59□□□□□ -1.03
YKR040CYKR040C YGL185CP53100 379 aa8.59□□□□□ -1.03
YKR040CYKR040C SGF11Q03067 99 aa8.59□□□□□ -1.03
YKR040CYKR040C VAM10Q08474 114 aa8.59□□□□□ -1.03
YKR040CYKR040C VAR1P02381 398 aa8.58□□□□□ -1.04
YKR040CYKR040C HAL1Q01766 294 aa8.58□□□□□ -1.04
YKR040CYKR040C YMR253CQ04835 414 aa8.58□□□□□ -1.04
YKR040CYKR040C YLR342W-AQ3E810 57 aa8.58□□□□□ -1.04
YKR040CYKR040C MRPL4P36517 319 aa8.57□□□□□ -1.04
YKR040CYKR040C HIT1P46973 164 aa8.57□□□□□ -1.04
YKR040CYKR040C DAD3P69850 94 aa8.57□□□□□ -1.04
YKR040CYKR040C Q0142Q9ZZW4 58 aa8.57□□□□□ -1.04
YKR040CYKR040C Q0255P03881 472 aa8.56□□□□□ -1.04
YKR040CYKR040C SEC59P20048 519 aa8.56□□□□□ -1.04
YKR040CYKR040C YBR090CP38253 122 aa8.56□□□□□ -1.04
YKR040CYKR040C VHS2P40463 436 aa8.56□□□□□ -1.04
YKR040CYKR040C PHS1P40857 217 aa8.56□□□□□ -1.04
YKR040CYKR040C ATP19P81451 68 aa8.56□□□□□ -1.04
YKR040CYKR040C YOR105WQ08504 108 aa8.56□□□□□ -1.04
YKR040CYKR040C UTP23Q12339 254 aaKnown RBP8.56□□□□□ -1.04
YKR040CYKR040C YCR075W-AQ3E830 75 aa8.56□□□□□ -1.04
YKR040CYKR040C KEG1P43614 200 aa8.55□□□□□ -1.04
YKR040CYKR040C TY1A-DR3Q12441 440 aa8.55□□□□□ -1.04
YKR040CYKR040C POF1P25576 258 aa8.54□□□□□ -1.04
YKR040CYKR040C FZF1P32805 299 aa8.54□□□□□ -1.04
YKR040CYKR040C NAT3Q06504 195 aa8.54□□□□□ -1.04
YKR040CYKR040C TY1A-HP0C2I4 478 aaKnown RBP8.53□□□□□ -1.04
YKR040CYKR040C VMA16P23968 213 aa8.53□□□□□ -1.04
YKR040CYKR040C POG1P40473 351 aa8.53□□□□□ -1.04
YKR040CYKR040C YFR045WP43617 309 aa8.53□□□□□ -1.04
YKR040CYKR040C SRP21P32342 167 aa8.52□□□□□ -1.05
Retrieved 100 of 5,963 RNA–protein pairs in 57.4 ms