RNA–Protein interactions for RNA: YJR029W

YJR029W, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeast

Gene YJR029W, Length 5,268 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YJR029W	YJR029W	CLG1	P35190	452 aa		0.85	□□□□□ -2.27
YJR029W	YJR029W	SRL3	P36167	246 aa		0.85	□□□□□ -2.27
YJR029W	YJR029W	RIB1	P38066	345 aa		0.85	□□□□□ -2.27
YJR029W	YJR029W	YEL028W	P39989	153 aa		0.85	□□□□□ -2.27
YJR029W	YJR029W	SPI1	P40092	148 aa		0.85	□□□□□ -2.27
YJR029W	YJR029W	YJL068C	P40363	299 aa		0.85	□□□□□ -2.27
YJR029W	YJR029W	YIL054W	P40524	105 aa		0.85	□□□□□ -2.27
YJR029W	YJR029W	HYR1	P40581	163 aa	Known RBP	0.85	□□□□□ -2.27
YJR029W	YJR029W	BNS1	P50084	137 aa		0.85	□□□□□ -2.27
YJR029W	YJR029W	YML119W	Q03208	357 aa		0.85	□□□□□ -2.27
YJR029W	YJR029W	RIM9	Q04734	239 aa		0.85	□□□□□ -2.27
YJR029W	YJR029W	SVS1	Q12254	260 aa		0.85	□□□□□ -2.27
YJR029W	YJR029W	DFM1	Q12743	341 aa	Known RBP	0.85	□□□□□ -2.27
YJR029W	YJR029W	YPR010C-A	A5Z2X5	72 aa		0.85	□□□□□ -2.27
YJR029W	YJR029W	MXR2	P25566	168 aa		0.85	□□□□□ -2.27
YJR029W	YJR029W	ADK2	P26364	225 aa		0.85	□□□□□ -2.27
YJR029W	YJR029W	COX13	P32799	129 aa		0.85	□□□□□ -2.27
YJR029W	YJR029W	RPL14A	P36105	138 aa	Known RBP	0.85	□□□□□ -2.27
YJR029W	YJR029W	UTH1	P36135	365 aa		0.85	□□□□□ -2.27
YJR029W	YJR029W	RPL14B	P38754	138 aa	Known RBP	0.85	□□□□□ -2.27
YJR029W	YJR029W	CCS1	P40202	249 aa	Known RBP	0.85	□□□□□ -2.27
YJR029W	YJR029W	HIS6	P40545	261 aa		0.85	□□□□□ -2.27
YJR029W	YJR029W	YFR054C	P43622	192 aa		0.85	□□□□□ -2.27
YJR029W	YJR029W	LSM3	P57743	89 aa	Known RBP	0.85	□□□□□ -2.27
YJR029W	YJR029W	TMS1	Q12116	473 aa		0.85	□□□□□ -2.27
YJR029W	YJR029W	TAO3	P40468	2376 aa		0.85	□□□□□ -2.27
YJR029W	YJR029W	YPR170W-B	P0C5R9	85 aa		0.85	□□□□□ -2.27
YJR029W	YJR029W	MRPL31	P14063	131 aa	Predicted RBP	0.85	□□□□□ -2.27
YJR029W	YJR029W	YEL045C	P32616	141 aa		0.85	□□□□□ -2.27
YJR029W	YJR029W	SWD3	P38123	315 aa		0.85	□□□□□ -2.27
YJR029W	YJR029W	ATP23	P53722	227 aa		0.85	□□□□□ -2.27
YJR029W	YJR029W	CYT2	Q00873	224 aa		0.85	□□□□□ -2.27
YJR029W	YJR029W	YDR102C	Q03864	110 aa		0.85	□□□□□ -2.27
YJR029W	YJR029W	TAF9	Q05027	157 aa		0.85	□□□□□ -2.27
YJR029W	YJR029W	PAM18	Q07914	168 aa		0.85	□□□□□ -2.27
YJR029W	YJR029W	TIM18	Q08749	192 aa		0.85	□□□□□ -2.27
YJR029W	YJR029W	NCE102	Q12207	173 aa	RIP-Chip data	0.85	□□□□□ -2.27	not detected
YJR029W	YJR029W	YOR343C	Q12484	108 aa		0.85	□□□□□ -2.27
YJR029W	YJR029W	KRE5	P22023	1365 aa		0.85	□□□□□ -2.27
YJR029W	YJR029W	ARO4	P32449	370 aa	Known RBP	0.85	□□□□□ -2.27
YJR029W	YJR029W	YKL097C	P34245	136 aa		0.85	□□□□□ -2.27
YJR029W	YJR029W	YBR292C	P38357	123 aa		0.85	□□□□□ -2.27
YJR029W	YJR029W	YPT31	P38555	223 aa	Known RBP	0.85	□□□□□ -2.27
YJR029W	YJR029W	CTR2	P38865	189 aa		0.85	□□□□□ -2.27
YJR029W	YJR029W	YEL057C	P39983	233 aa		0.85	□□□□□ -2.27
YJR029W	YJR029W	GAT1	P43574	510 aa		0.85	□□□□□ -2.27
YJR029W	YJR029W	FYV6	P53913	173 aa		0.85	□□□□□ -2.27
YJR029W	YJR029W	MIX17	Q03667	156 aa		0.85	□□□□□ -2.27
YJR029W	YJR029W	CCW12	Q12127	133 aa		0.85	□□□□□ -2.27
YJR029W	YJR029W	RPO41	P13433	1351 aa	Known RBP	0.84	□□□□□ -2.27
YJR029W	YJR029W	ECM12	O13529	151 aa		0.84	□□□□□ -2.27
YJR029W	YJR029W	VPS63	O13549	108 aa		0.84	□□□□□ -2.27
YJR029W	YJR029W	MTC7	P32633	139 aa		0.84	□□□□□ -2.27
YJR029W	YJR029W	YKT6	P36015	200 aa	Known RBP	0.84	□□□□□ -2.27
YJR029W	YJR029W	PRY2	P36110	329 aa		0.84	□□□□□ -2.27
YJR029W	YJR029W	GRX7	P38068	203 aa		0.84	□□□□□ -2.27
YJR029W	YJR029W	LSM2	P38203	95 aa	Known RBP	0.84	□□□□□ -2.27
YJR029W	YJR029W	AIM4	P38305	123 aa	Predicted RBP	0.84	□□□□□ -2.27
YJR029W	YJR029W	SAS2	P40963	338 aa		0.84	□□□□□ -2.27
YJR029W	YJR029W	CWP2	P43497	92 aa		0.84	□□□□□ -2.27
YJR029W	YJR029W	YDL121C	Q07541	149 aa		0.84	□□□□□ -2.27
YJR029W	YJR029W	MCT1	Q12283	360 aa		0.84	□□□□□ -2.27
YJR029W	YJR029W	SLO1	Q3E784	85 aa		0.84	□□□□□ -2.27
YJR029W	YJR029W	SKI3	P17883	1432 aa	Known RBP	0.84	□□□□□ -2.27
YJR029W	YJR029W	TAF2	P23255	1407 aa		0.84	□□□□□ -2.27
YJR029W	YJR029W	SNT2	P53127	1403 aa		0.84	□□□□□ -2.27
YJR029W	YJR029W	RPS19A	P07280	144 aa	Known RBP	0.84	□□□□□ -2.27
YJR029W	YJR029W	RPS19B	P07281	144 aa	Predicted RBP	0.84	□□□□□ -2.27
YJR029W	YJR029W	YHR032W-A	P0C5N6	59 aa		0.84	□□□□□ -2.27
YJR029W	YJR029W	RPL23A	P0CX41	137 aa	Known RBP	0.84	□□□□□ -2.27
YJR029W	YJR029W	RPL23B	P0CX42	137 aa	Known RBP	0.84	□□□□□ -2.27
YJR029W	YJR029W	ATP12	P22135	325 aa		0.84	□□□□□ -2.27
YJR029W	YJR029W	YCR100C	P25606	316 aa		0.84	□□□□□ -2.27
YJR029W	YJR029W	YBR013C	P38215	129 aa		0.84	□□□□□ -2.27
YJR029W	YJR029W	ICS2	P38284	255 aa		0.84	□□□□□ -2.27
YJR029W	YJR029W	NTC20	P38302	140 aa	Predicted RBP	0.84	□□□□□ -2.27
YJR029W	YJR029W	WSC4	P38739	605 aa		0.84	□□□□□ -2.27
YJR029W	YJR029W	PET8	P38921	284 aa		0.84	□□□□□ -2.27
YJR029W	YJR029W	SOP4	P39543	234 aa	Predicted RBP	0.84	□□□□□ -2.27
YJR029W	YJR029W	YEL014C	P39999	101 aa		0.84	□□□□□ -2.27
YJR029W	YJR029W	GNA1	P43577	159 aa	Predicted RBP	0.84	□□□□□ -2.27
YJR029W	YJR029W	MPC1	P53157	130 aa	Known RBP	0.84	□□□□□ -2.27
YJR029W	YJR029W	FIT2	Q08906	153 aa		0.84	□□□□□ -2.27
YJR029W	YJR029W	YLR112W	Q12130	139 aa		0.84	□□□□□ -2.27
YJR029W	YJR029W	YPR145C-A	Q2V2P0	78 aa		0.84	□□□□□ -2.27
YJR029W	YJR029W	YLR363W-A	Q3E747	85 aa		0.84	□□□□□ -2.27
YJR029W	YJR029W	YLL006W-A	Q3E814	58 aa		0.84	□□□□□ -2.27
YJR029W	YJR029W	MBF1	O14467	151 aa	Known RBP	0.84	□□□□□ -2.28
YJR029W	YJR029W	MRP1	P10662	321 aa	Known RBP	0.84	□□□□□ -2.28
YJR029W	YJR029W	CMC1	P36064	111 aa		0.84	□□□□□ -2.28
YJR029W	YJR029W	THI2	P38141	450 aa		0.84	□□□□□ -2.28
YJR029W	YJR029W	YMR141C	P40211	102 aa		0.84	□□□□□ -2.28
YJR029W	YJR029W	VHS2	P40463	436 aa		0.84	□□□□□ -2.28
YJR029W	YJR029W	SWS2	P53937	143 aa		0.84	□□□□□ -2.28
YJR029W	YJR029W	ATO3	Q12359	275 aa		0.84	□□□□□ -2.28
YJR029W	YJR029W	YLR099W-A	Q3E798	87 aa		0.84	□□□□□ -2.28
YJR029W	YJR029W	YFL041W-A	Q3E817	63 aa		0.84	□□□□□ -2.28
YJR029W	YJR029W	OST5	Q92316	86 aa		0.84	□□□□□ -2.28
YJR029W	YJR029W	TCB3	Q03640	1545 aa	Known RBP	0.84	□□□□□ -2.28
YJR029W	YJR029W	RME1	P32338	300 aa	Known RBP	0.84	□□□□□ -2.28

Retrieved 100 of 5,963 RNA–protein pairs in 142.9 ms