RNA–Protein interactions for RNA: YJL033W

HCA4, Transcript of DEAD box RNA helicase, yeastyeast

Gene HCA4, Length 2,313 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HCA4YJL033W VAR1P02381 398 aa3.2□□□□□ -1.9
HCA4YJL033W RPL1AP0CX43 217 aaKnown RBP3.2□□□□□ -1.9
HCA4YJL033W RPL1BP0CX44 217 aaKnown RBP3.2□□□□□ -1.9
HCA4YJL033W CTA1P15202 515 aa3.2□□□□□ -1.9
HCA4YJL033W AHT1P29589 182 aa3.2□□□□□ -1.9
HCA4YJL033W TIM12P32830 109 aa3.2□□□□□ -1.9
HCA4YJL033W CMC1P36064 111 aa3.2□□□□□ -1.9
HCA4YJL033W DPP1Q05521 289 aa3.2□□□□□ -1.9
HCA4YJL033W ARC18Q05933 178 aaKnown RBP3.2□□□□□ -1.9
HCA4YJL033W MSB2P32334 1306 aa3.19□□□□□ -1.9
HCA4YJL033W SEC16P48415 2195 aaKnown RBP3.19□□□□□ -1.9
HCA4YJL033W YCR022CP25620 114 aa3.19□□□□□ -1.9
HCA4YJL033W ARO4P32449 370 aaKnown RBP3.19□□□□□ -1.9
HCA4YJL033W YKL071WP36086 256 aa3.19□□□□□ -1.9
HCA4YJL033W SEC72P39742 193 aaKnown RBP3.19□□□□□ -1.9
HCA4YJL033W YLR460CP54007 376 aa3.19□□□□□ -1.9
HCA4YJL033W GTO3Q04806 366 aa3.19□□□□□ -1.9
HCA4YJL033W YDL211CQ12121 372 aa3.19□□□□□ -1.9
HCA4YJL033W YLL053CP0CD98 152 aa3.19□□□□□ -1.9
HCA4YJL033W ZRT1P32804 376 aa3.19□□□□□ -1.9
HCA4YJL033W RPS27AP35997 82 aaKnown RBP3.19□□□□□ -1.9
HCA4YJL033W RPS27BP38711 82 aa3.19□□□□□ -1.9
HCA4YJL033W YML079WQ03629 201 aa3.19□□□□□ -1.9
HCA4YJL033W ECM18Q04623 453 aa3.19□□□□□ -1.9
HCA4YJL033W PRP46Q12417 451 aaPredicted RBP3.19□□□□□ -1.9
HCA4YJL033W YBL112CQ3E7Y4 105 aa3.19□□□□□ -1.9
HCA4YJL033W UBA3Q99344 299 aa3.19□□□□□ -1.9
HCA4YJL033W TRA1P38811 3744 aa3.18□□□□□ -1.9
HCA4YJL033W ACC1Q00955 2233 aaKnown RBP3.18□□□□□ -1.9
HCA4YJL033W FCY2P17064 533 aa3.18□□□□□ -1.9
HCA4YJL033W AGA1P32323 725 aa3.18□□□□□ -1.9
HCA4YJL033W ATX1P38636 73 aa3.18□□□□□ -1.9
HCA4YJL033W OGG1P53397 376 aaPredicted RBP3.18□□□□□ -1.9
HCA4YJL033W MSO1P53604 210 aaKnown RBP3.18□□□□□ -1.9
HCA4YJL033W SUR7P54003 302 aa3.18□□□□□ -1.9
HCA4YJL033W YDR102CQ03864 110 aa3.18□□□□□ -1.9
HCA4YJL033W LPP1Q04396 274 aa3.18□□□□□ -1.9
HCA4YJL033W POC4Q12245 148 aaPredicted RBP3.18□□□□□ -1.9
HCA4YJL033W BLM10P43583 2143 aa3.18□□□□□ -1.9
HCA4YJL033W GAL7P08431 366 aa3.18□□□□□ -1.9
HCA4YJL033W FPR1P20081 114 aaKnown RBP3.18□□□□□ -1.9
HCA4YJL033W MDH2P22133 377 aa3.18□□□□□ -1.9
HCA4YJL033W FYV4P38783 130 aaPredicted RBP3.18□□□□□ -1.9
HCA4YJL033W OXA1P39952 402 aa3.18□□□□□ -1.9
HCA4YJL033W PET191Q02772 108 aa3.18□□□□□ -1.9
HCA4YJL033W YPL039WQ03080 316 aa3.18□□□□□ -1.9
HCA4YJL033W RIM9Q04734 239 aa3.18□□□□□ -1.9
HCA4YJL033W YPR098CQ06089 161 aa3.18□□□□□ -1.9
HCA4YJL033W SNT309Q06091 175 aaPredicted RBP3.18□□□□□ -1.9
HCA4YJL033W SMT3Q12306 101 aaKnown RBP3.18□□□□□ -1.9
HCA4YJL033W YPL229WQ99395 206 aa3.18□□□□□ -1.9
HCA4YJL033W SOD1P00445 154 aaKnown RBP3.17□□□□□ -1.9
HCA4YJL033W COX10P21592 462 aa3.17□□□□□ -1.9
HCA4YJL033W HSP150P32478 413 aa3.17□□□□□ -1.9
HCA4YJL033W YOR062CP36025 268 aa3.17□□□□□ -1.9
HCA4YJL033W YHR180WP38868 163 aa3.17□□□□□ -1.9
HCA4YJL033W OST2P46964 130 aa3.17□□□□□ -1.9
HCA4YJL033W SDH7Q04401 133 aa3.17□□□□□ -1.9
HCA4YJL033W OPI3P05375 206 aa3.16□□□□□ -1.9
HCA4YJL033W CUP2P15315 225 aa3.16□□□□□ -1.9
HCA4YJL033W ERG2P32352 222 aa3.16□□□□□ -1.9
HCA4YJL033W TIR2P33890 251 aa3.16□□□□□ -1.9
HCA4YJL033W MRPL24P36525 258 aaPredicted RBP3.16□□□□□ -1.9
HCA4YJL033W ECM14P38836 430 aa3.16□□□□□ -1.9
HCA4YJL033W SRP14P38985 146 aa3.16□□□□□ -1.9
HCA4YJL033W GPI2P46961 280 aa3.16□□□□□ -1.9
HCA4YJL033W YGL235WP53071 178 aa3.16□□□□□ -1.9
HCA4YJL033W YLR152CP54072 576 aa3.16□□□□□ -1.9
HCA4YJL033W ATG40Q99325 256 aa3.16□□□□□ -1.9
HCA4YJL033W PAD1P33751 242 aaKnown RBP RIP-Chip data3.16□□□□□ -1.9not detected
HCA4YJL033W SRX1P36077 127 aa3.16□□□□□ -1.9
HCA4YJL033W YGP1P38616 354 aaKnown RBP3.16□□□□□ -1.9
HCA4YJL033W ARP3P47117 449 aaKnown RBP3.16□□□□□ -1.9
HCA4YJL033W MIC27P50945 234 aa3.16□□□□□ -1.9
HCA4YJL033W YIP5P53108 310 aa3.16□□□□□ -1.9
HCA4YJL033W CRH1P53301 507 aa3.16□□□□□ -1.9
HCA4YJL033W JID1Q12350 301 aa3.16□□□□□ -1.9
HCA4YJL033W MRS1P07266 363 aa3.15□□□□□ -1.9
HCA4YJL033W YSF3P0C074 85 aaPredicted RBP3.15□□□□□ -1.9
HCA4YJL033W RPS22AP0C0W1 130 aaKnown RBP3.15□□□□□ -1.9
HCA4YJL033W ARF1P11076 181 aaKnown RBP3.15□□□□□ -1.9
HCA4YJL033W YER085CP40058 173 aa3.15□□□□□ -1.9
HCA4YJL033W YNL200CP40165 246 aaKnown RBP3.15□□□□□ -1.9
HCA4YJL033W YIL163CP40448 117 aa3.15□□□□□ -1.9
HCA4YJL033W TDA4P47153 279 aa3.15□□□□□ -1.9
HCA4YJL033W SBH2P52871 88 aa3.15□□□□□ -1.9
HCA4YJL033W LIP2Q06005 328 aa3.15□□□□□ -1.9
HCA4YJL033W RPS22BQ3E7Y3 130 aaKnown RBP3.15□□□□□ -1.9
HCA4YJL033W TOR2P32600 2474 aaKnown RBP3.15□□□□□ -1.9
HCA4YJL033W YDR157WA0A023PZE8 133 aa3.15□□□□□ -1.91
HCA4YJL033W HMRA1P0CY11 126 aa3.15□□□□□ -1.91
HCA4YJL033W MRPL20P22354 195 aaPredicted RBP3.15□□□□□ -1.91
HCA4YJL033W MIC12P38341 106 aa3.15□□□□□ -1.91
HCA4YJL033W SAS2P40963 338 aa3.15□□□□□ -1.91
HCA4YJL033W YGL118CP53132 145 aa3.15□□□□□ -1.91
HCA4YJL033W YIP3P53633 176 aa3.15□□□□□ -1.91
HCA4YJL033W VPS71Q03433 280 aa3.15□□□□□ -1.91
HCA4YJL033W DGA1Q08650 418 aa3.15□□□□□ -1.91
HCA4YJL033W QCR9P22289 66 aa3.14□□□□□ -1.91
HCA4YJL033W REC114P32841 428 aa3.14□□□□□ -1.91
Retrieved 100 of 5,963 RNA–protein pairs in 26.9 ms