RNA–Protein interactions for RNA: YJL001W

PRE3, Transcript of Beta 1 subunit of the 20S proteasome, yeastyeast

Gene PRE3, Length 648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE3YJL001W CAF40P53829 373 aa4.42□□□□□ -1.7
PRE3YJL001W YPL264CQ08980 353 aa4.42□□□□□ -1.7
PRE3YJL001W YPL162CQ12042 273 aa4.42□□□□□ -1.7
PRE3YJL001W FCY2P17064 533 aa4.41□□□□□ -1.7
PRE3YJL001W YBR242WP38331 238 aa4.41□□□□□ -1.7
PRE3YJL001W RRF1P38771 230 aa4.41□□□□□ -1.7
PRE3YJL001W YJR015WP47090 510 aa4.41□□□□□ -1.7
PRE3YJL001W AIM24P47127 394 aa4.41□□□□□ -1.7
PRE3YJL001W HST4P53688 370 aa4.41□□□□□ -1.7
PRE3YJL001W SDH7Q04401 133 aa4.41□□□□□ -1.7
PRE3YJL001W YPR195CQ06594 109 aa4.41□□□□□ -1.7
PRE3YJL001W ARG80P07249 177 aa4.4□□□□□ -1.71
PRE3YJL001W PUT1P09368 476 aa4.4□□□□□ -1.71
PRE3YJL001W RPL2AP0CX45 254 aaKnown RBP4.4□□□□□ -1.71
PRE3YJL001W RPL2BP0CX46 254 aaKnown RBP4.4□□□□□ -1.71
PRE3YJL001W RPS11AP0CX47 156 aaKnown RBP4.4□□□□□ -1.71
PRE3YJL001W RPS11BP0CX48 156 aaKnown RBP4.4□□□□□ -1.71
PRE3YJL001W ZRC1P20107 442 aa4.4□□□□□ -1.71
PRE3YJL001W SEC22P22214 214 aa4.4□□□□□ -1.71
PRE3YJL001W ORM1P53224 222 aa4.4□□□□□ -1.71
PRE3YJL001W MRPS16Q02608 121 aa4.4□□□□□ -1.71
PRE3YJL001W YOL160WQ08321 113 aa4.4□□□□□ -1.71
PRE3YJL001W YPR063CQ12160 140 aa4.4□□□□□ -1.71
PRE3YJL001W AIM45Q12480 344 aaKnown RBP4.4□□□□□ -1.71
PRE3YJL001W COA2Q3E823 68 aa4.4□□□□□ -1.71
PRE3YJL001W SAL1D6W196 494 aa4.39□□□□□ -1.71
PRE3YJL001W RIB5P38145 238 aa4.39□□□□□ -1.71
PRE3YJL001W UBC7Q02159 165 aa4.39□□□□□ -1.71
PRE3YJL001W LOA1Q06508 300 aa4.39□□□□□ -1.71
PRE3YJL001W YMR316C-AI2HB70 103 aa4.38□□□□□ -1.71
PRE3YJL001W CPR1P14832 162 aaKnown RBP4.38□□□□□ -1.71
PRE3YJL001W YCR025CP25352 136 aa4.38□□□□□ -1.71
PRE3YJL001W YPC1P38298 316 aa4.38□□□□□ -1.71
PRE3YJL001W MCM22P47167 239 aa4.38□□□□□ -1.71
PRE3YJL001W RPS25BP0C0T4 108 aaKnown RBP4.37□□□□□ -1.71
PRE3YJL001W PDR17P53844 350 aa4.37□□□□□ -1.71
PRE3YJL001W FMP41P53889 259 aaKnown RBP4.37□□□□□ -1.71
PRE3YJL001W YMR090WQ04304 227 aaKnown RBP4.37□□□□□ -1.71
PRE3YJL001W RPS25AQ3E792 108 aaPredicted RBP4.37□□□□□ -1.71
PRE3YJL001W PPQ1P32945 549 aa4.36□□□□□ -1.71
PRE3YJL001W SHB17P36136 271 aaKnown RBP4.36□□□□□ -1.71
PRE3YJL001W MIX23P38162 196 aa4.36□□□□□ -1.71
PRE3YJL001W SFT2P38166 215 aa4.36□□□□□ -1.71
PRE3YJL001W RPL13BP40212 199 aaKnown RBP4.36□□□□□ -1.71
PRE3YJL001W RRT7Q07829 113 aa4.36□□□□□ -1.71
PRE3YJL001W CCW12Q12127 133 aa4.36□□□□□ -1.71
PRE3YJL001W RPL13AQ12690 199 aaPredicted RBP4.36□□□□□ -1.71
PRE3YJL001W AGA1P32323 725 aa4.35□□□□□ -1.71
PRE3YJL001W LSM2P38203 95 aaKnown RBP4.35□□□□□ -1.71
PRE3YJL001W YNL200CP40165 246 aaKnown RBP4.35□□□□□ -1.71
PRE3YJL001W PRE5P40302 234 aaKnown RBP4.35□□□□□ -1.71
PRE3YJL001W PPT2Q12036 173 aa4.35□□□□□ -1.71
PRE3YJL001W TPT1Q12272 230 aaKnown RBP4.35□□□□□ -1.71
PRE3YJL001W YLR146W-AQ2V2P1 62 aa4.35□□□□□ -1.71
PRE3YJL001W RPL12AP0CX53 165 aaKnown RBP4.34□□□□□ -1.71
PRE3YJL001W RPL12BP0CX54 165 aa4.34□□□□□ -1.71
PRE3YJL001W SLM6P38343 150 aa4.34□□□□□ -1.71
PRE3YJL001W YHR022CP38763 256 aa4.34□□□□□ -1.71
PRE3YJL001W YGR269WP40326 108 aa4.34□□□□□ -1.71
PRE3YJL001W YFL067WP43537 175 aa4.34□□□□□ -1.71
PRE3YJL001W MIC27P50945 234 aa4.34□□□□□ -1.71
PRE3YJL001W BOR1P53838 576 aa4.34□□□□□ -1.71
PRE3YJL001W CUP2P15315 225 aa4.33□□□□□ -1.72
PRE3YJL001W TIR2P33890 251 aa4.33□□□□□ -1.72
PRE3YJL001W PET100P38958 111 aa4.33□□□□□ -1.72
PRE3YJL001W YEA6P39953 335 aa4.33□□□□□ -1.72
PRE3YJL001W SHH3Q04487 196 aa4.33□□□□□ -1.72
PRE3YJL001W LCL2Q08045 131 aa4.33□□□□□ -1.72
PRE3YJL001W CKS1P20486 150 aaKnown RBP4.32□□□□□ -1.72
PRE3YJL001W SWM2P40342 146 aa4.32□□□□□ -1.72
PRE3YJL001W YMR082CQ04276 118 aa4.32□□□□□ -1.72
PRE3YJL001W ERV2Q12284 196 aa4.32□□□□□ -1.72
PRE3YJL001W DDI2P0CH63 225 aa4.31□□□□□ -1.72
PRE3YJL001W DDI3P0CH64 225 aa4.31□□□□□ -1.72
PRE3YJL001W ANB1P19211 157 aa4.31□□□□□ -1.72
PRE3YJL001W ACB1P31787 87 aa4.31□□□□□ -1.72
PRE3YJL001W DID2P69771 204 aa4.31□□□□□ -1.72
PRE3YJL001W PRR2Q12310 699 aa4.31□□□□□ -1.72
PRE3YJL001W YPR145C-AQ2V2P0 78 aa4.31□□□□□ -1.72
PRE3YJL001W YCR075W-AQ3E830 75 aa4.31□□□□□ -1.72
PRE3YJL001W YBR298C-AQ8TGK4 73 aa4.31□□□□□ -1.72
PRE3YJL001W YHR213W-AQ8TGT4 77 aa4.31□□□□□ -1.72
PRE3YJL001W IRC22P40006 225 aa4.3□□□□□ -1.72
PRE3YJL001W YJR111CP47148 283 aaKnown RBP4.3□□□□□ -1.72
PRE3YJL001W PNC1P53184 216 aaKnown RBP4.3□□□□□ -1.72
PRE3YJL001W SNO1Q03144 224 aa4.3□□□□□ -1.72
PRE3YJL001W YCL021W-AQ96VH3 125 aa4.3□□□□□ -1.72
PRE3YJL001W YOL085CQ99345 113 aa4.3□□□□□ -1.72
PRE3YJL001W MSK1P32048 576 aa4.29□□□□□ -1.72
PRE3YJL001W YPS5P53057 165 aa4.29□□□□□ -1.72
PRE3YJL001W CTR3Q06686 241 aa4.29□□□□□ -1.72
PRE3YJL001W SAR1P20606 190 aaKnown RBP4.28□□□□□ -1.72
PRE3YJL001W HMX1P32339 317 aa4.28□□□□□ -1.72
PRE3YJL001W EMP24P32803 203 aaKnown RBP4.28□□□□□ -1.72
PRE3YJL001W SPI1P40092 148 aa4.28□□□□□ -1.72
PRE3YJL001W YDR157WA0A023PZE8 133 aa4.27□□□□□ -1.73
PRE3YJL001W VAR1P02381 398 aa4.27□□□□□ -1.73
PRE3YJL001W RPB3P16370 318 aaKnown RBP4.27□□□□□ -1.73
PRE3YJL001W YBL059WP34224 193 aa4.27□□□□□ -1.73
PRE3YJL001W YEA4P40004 342 aa4.27□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 16.3 ms