RNA–Protein interactions for RNA: YIR006C

PAN1, Transcript of Part of actin cytoskeleton-regulatory complex Pan1p-Sla1p-End3p, yeastyeast

Gene PAN1, Length 4,443 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PAN1YIR006C UPS3Q04006 179 aa3.99□□□□□ -1.77
PAN1YIR006C ILV5P06168 395 aaKnown RBP3.98□□□□□ -1.77
PAN1YIR006C YCR023CP25351 611 aa3.98□□□□□ -1.77
PAN1YIR006C FYV4P38783 130 aaPredicted RBP3.98□□□□□ -1.77
PAN1YIR006C YER181CP40097 107 aa3.98□□□□□ -1.77
PAN1YIR006C YIL152WP40455 235 aa3.98□□□□□ -1.77
PAN1YIR006C LOC1P43586 204 aaPredicted RBP3.98□□□□□ -1.77
PAN1YIR006C YOR304C-AO14468 76 aa3.98□□□□□ -1.77
PAN1YIR006C RPL31AP0C2H8 113 aaKnown RBP3.98□□□□□ -1.77
PAN1YIR006C RPL32P38061 130 aaKnown RBP3.98□□□□□ -1.77
PAN1YIR006C BDH1P39714 382 aa3.98□□□□□ -1.77
PAN1YIR006C COA2Q3E823 68 aa3.98□□□□□ -1.77
PAN1YIR006C STT4P37297 1900 aa3.98□□□□□ -1.77
PAN1YIR006C YGR045CP53229 120 aa3.98□□□□□ -1.77
PAN1YIR006C CPD1P53314 239 aa3.98□□□□□ -1.77
PAN1YIR006C ROX3P25046 220 aa3.98□□□□□ -1.77
PAN1YIR006C ARO2P28777 376 aaKnown RBP3.98□□□□□ -1.77
PAN1YIR006C YGR151CP53287 111 aa3.98□□□□□ -1.77
PAN1YIR006C MRPL19P53875 158 aa3.98□□□□□ -1.77
PAN1YIR006C YPL162CQ12042 273 aa3.98□□□□□ -1.77
PAN1YIR006C SPO24Q3E752 67 aa3.98□□□□□ -1.77
PAN1YIR006C MRS3P10566 314 aa3.97□□□□□ -1.77
PAN1YIR006C PAU16P35994 123 aa3.97□□□□□ -1.77
PAN1YIR006C BUD8P41698 603 aa3.97□□□□□ -1.77
PAN1YIR006C YFL054CP43549 646 aa3.97□□□□□ -1.77
PAN1YIR006C YJL163CP46996 555 aa3.97□□□□□ -1.77
PAN1YIR006C YGR050CP53231 118 aa3.97□□□□□ -1.77
PAN1YIR006C DAP1Q12091 152 aa3.97□□□□□ -1.77
PAN1YIR006C ECM33P38248 429 aaKnown RBP3.97□□□□□ -1.77
PAN1YIR006C YBR209WP38311 105 aa3.97□□□□□ -1.77
PAN1YIR006C PCP1P53259 346 aa3.97□□□□□ -1.77
PAN1YIR006C VAR1P02381 398 aa3.97□□□□□ -1.77
PAN1YIR006C YPL073CP40323 161 aa3.97□□□□□ -1.77
PAN1YIR006C ABM1P47146 123 aa3.97□□□□□ -1.77
PAN1YIR006C POP3P53833 195 aaPredicted RBP3.97□□□□□ -1.77
PAN1YIR006C YCL021W-AQ96VH3 125 aa3.97□□□□□ -1.77
PAN1YIR006C YLR358CO13565 187 aa3.96□□□□□ -1.77
PAN1YIR006C RAD6P06104 172 aa3.96□□□□□ -1.77
PAN1YIR006C PIS1P06197 220 aaKnown RBP3.96□□□□□ -1.77
PAN1YIR006C YFL068WP0CX99 160 aa3.96□□□□□ -1.77
PAN1YIR006C YLL066W-AP0CY00 160 aa3.96□□□□□ -1.77
PAN1YIR006C YLL067W-AP0CY01 160 aa3.96□□□□□ -1.77
PAN1YIR006C MRPL38P35996 138 aaPredicted RBP3.96□□□□□ -1.77
PAN1YIR006C YJR096WP47137 282 aa3.96□□□□□ -1.77
PAN1YIR006C COX18P53239 316 aa3.96□□□□□ -1.77
PAN1YIR006C SUR7P54003 302 aa3.96□□□□□ -1.77
PAN1YIR006C YMR181CQ03231 154 aa3.96□□□□□ -1.77
PAN1YIR006C FCF1Q05498 189 aaPredicted RBP3.96□□□□□ -1.77
PAN1YIR006C RPL39P04650 51 aa3.96□□□□□ -1.78
PAN1YIR006C YER190C-BP0CX94 160 aa3.96□□□□□ -1.78
PAN1YIR006C YEL077W-AP0CX95 160 aa3.96□□□□□ -1.78
PAN1YIR006C YGR296C-BP0CX96 160 aa3.96□□□□□ -1.78
PAN1YIR006C YPL283W-BP0CX97 160 aa3.96□□□□□ -1.78
PAN1YIR006C YPR204C-AP0CX98 160 aa3.96□□□□□ -1.78
PAN1YIR006C SCO1P23833 295 aa3.96□□□□□ -1.78
PAN1YIR006C YHR140WP38842 239 aa3.96□□□□□ -1.78
PAN1YIR006C MRL1Q06815 381 aa3.96□□□□□ -1.78
PAN1YIR006C YPL261CQ08976 102 aa3.96□□□□□ -1.78
PAN1YIR006C FOL3Q12676 427 aaPredicted RBP3.96□□□□□ -1.78
PAN1YIR006C TOM40P23644 387 aaKnown RBP3.96□□□□□ -1.78
PAN1YIR006C PAU23Q07987 124 aa3.96□□□□□ -1.78
PAN1YIR006C PAU17Q12370 124 aa3.96□□□□□ -1.78
PAN1YIR006C YMR31P19955 123 aa3.95□□□□□ -1.78
PAN1YIR006C NCA3P46955 337 aa3.95□□□□□ -1.78
PAN1YIR006C ACC1Q00955 2233 aaKnown RBP3.95□□□□□ -1.78
PAN1YIR006C RPL27AP0C2H6 136 aaKnown RBP3.95□□□□□ -1.78
PAN1YIR006C YCR006CP25350 157 aa3.95□□□□□ -1.78
PAN1YIR006C PRS4P38063 326 aaPredicted RBP3.95□□□□□ -1.78
PAN1YIR006C EGT2P42835 1041 aa3.95□□□□□ -1.78
PAN1YIR006C CRH1P53301 507 aa3.95□□□□□ -1.78
PAN1YIR006C HPA2Q06592 156 aa3.95□□□□□ -1.78
PAN1YIR006C RPL12AP0CX53 165 aaKnown RBP3.95□□□□□ -1.78
PAN1YIR006C RPL12BP0CX54 165 aa3.95□□□□□ -1.78
PAN1YIR006C AHT1P29589 182 aa3.95□□□□□ -1.78
PAN1YIR006C MRPS5P33759 307 aa3.95□□□□□ -1.78
PAN1YIR006C YER084WP40057 128 aa3.95□□□□□ -1.78
PAN1YIR006C TOM7P53507 60 aa3.95□□□□□ -1.78
PAN1YIR006C IZH1Q03419 316 aa3.95□□□□□ -1.78
PAN1YIR006C MBB1P39534 108 aa3.94□□□□□ -1.78
PAN1YIR006C SNU13P39990 126 aaKnown RBP3.94□□□□□ -1.78
PAN1YIR006C YOL118CQ08259 102 aa3.94□□□□□ -1.78
PAN1YIR006C YCR024C-BQ3E7Z8 88 aa3.94□□□□□ -1.78
PAN1YIR006C YKR070WP36151 352 aaKnown RBP3.94□□□□□ -1.78
PAN1YIR006C UME6P39001 836 aa3.94□□□□□ -1.78
PAN1YIR006C GPP2P40106 250 aaKnown RBP3.94□□□□□ -1.78
PAN1YIR006C YIL059CP40520 121 aa3.94□□□□□ -1.78
PAN1YIR006C RAV2Q03956 351 aa3.94□□□□□ -1.78
PAN1YIR006C WSC3Q12215 556 aa3.94□□□□□ -1.78
PAN1YIR006C YLR118CQ12354 227 aa3.94□□□□□ -1.78
PAN1YIR006C DAL80P26343 269 aa3.94□□□□□ -1.78
PAN1YIR006C SGN1P40561 250 aaKnown RBP RIP-Chip data3.94□□□□□ -1.78not detected
PAN1YIR006C URA2P07259 2214 aaKnown RBP3.94□□□□□ -1.78
PAN1YIR006C CMC1P36064 111 aa3.94□□□□□ -1.78
PAN1YIR006C FSF1Q12029 327 aaKnown RBP3.94□□□□□ -1.78
PAN1YIR006C USV1Q12132 391 aa3.94□□□□□ -1.78
PAN1YIR006C RPP2AP05319 106 aaKnown RBP3.93□□□□□ -1.78
PAN1YIR006C CDC43P18898 376 aa3.93□□□□□ -1.78
PAN1YIR006C YGR039WP53225 103 aa3.93□□□□□ -1.78
PAN1YIR006C YDR215CQ12240 137 aa3.93□□□□□ -1.78
PAN1YIR006C PEX4P29340 183 aa3.93□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 90.4 ms