RNA–Protein interactions for RNA: YHR027C

RPN1, Transcript of Non-ATPase base subunit of the 19S RP of the 26S proteasome, yeastyeast

Gene RPN1, Length 2,982 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN1YHR027C YDR029WQ12111 104 aa2.64□□□□□ -1.99
RPN1YHR027C FCY1Q12178 158 aa2.64□□□□□ -1.99
RPN1YHR027C NPC2Q12408 173 aa2.64□□□□□ -1.99
RPN1YHR027C CSR2Q12734 1121 aa2.64□□□□□ -1.99
RPN1YHR027C DFM1Q12743 341 aaKnown RBP2.64□□□□□ -1.99
RPN1YHR027C YKL183C-AQ3E765 70 aa2.64□□□□□ -1.99
RPN1YHR027C FUB1P25659 250 aa2.64□□□□□ -1.99
RPN1YHR027C ERG2P32352 222 aa2.64□□□□□ -1.99
RPN1YHR027C NHP2P32495 156 aaPredicted RBP2.64□□□□□ -1.99
RPN1YHR027C CYB5P40312 120 aa2.64□□□□□ -1.99
RPN1YHR027C YIR016WP40572 265 aa2.64□□□□□ -1.99
RPN1YHR027C CPD1P53314 239 aa2.64□□□□□ -1.99
RPN1YHR027C POP3P53833 195 aaPredicted RBP2.64□□□□□ -1.99
RPN1YHR027C ERF2Q06551 359 aa2.64□□□□□ -1.99
RPN1YHR027C YDL180WQ12301 547 aa2.64□□□□□ -1.99
RPN1YHR027C YLL053CP0CD98 152 aa2.64□□□□□ -1.99
RPN1YHR027C RFA3P26755 122 aaKnown RBP2.64□□□□□ -1.99
RPN1YHR027C CSE2P33308 149 aa2.64□□□□□ -1.99
RPN1YHR027C SRX1P36077 127 aa2.64□□□□□ -1.99
RPN1YHR027C QRI5P32344 111 aa2.63□□□□□ -1.99
RPN1YHR027C PRS4P38063 326 aaPredicted RBP2.63□□□□□ -1.99
RPN1YHR027C RPP1P38786 293 aa2.63□□□□□ -1.99
RPN1YHR027C YGR269WP40326 108 aa2.63□□□□□ -1.99
RPN1YHR027C DFG10P40526 253 aa2.63□□□□□ -1.99
RPN1YHR027C RRG8Q06109 277 aa2.63□□□□□ -1.99
RPN1YHR027C HPA2Q06592 156 aa2.63□□□□□ -1.99
RPN1YHR027C MSA1Q08471 629 aa2.63□□□□□ -1.99
RPN1YHR027C RDL2Q08742 149 aaKnown RBP2.63□□□□□ -1.99
RPN1YHR027C SMT3Q12306 101 aaKnown RBP2.63□□□□□ -1.99
RPN1YHR027C YLR412C-AQ3E742 68 aa2.63□□□□□ -1.99
RPN1YHR027C YCL021W-AQ96VH3 125 aa2.63□□□□□ -1.99
RPN1YHR027C MLF3P32047 452 aa2.63□□□□□ -1.99
RPN1YHR027C YKR041WP36134 250 aa2.63□□□□□ -1.99
RPN1YHR027C MST28P39552 234 aa2.63□□□□□ -1.99
RPN1YHR027C CDC1P40986 491 aa2.63□□□□□ -1.99
RPN1YHR027C TDA4P47153 279 aa2.63□□□□□ -1.99
RPN1YHR027C TPC1P53257 314 aa2.63□□□□□ -1.99
RPN1YHR027C COX12Q01519 83 aa2.63□□□□□ -1.99
RPN1YHR027C YPL039WQ03080 316 aa2.63□□□□□ -1.99
RPN1YHR027C YMR320WQ04897 101 aa2.63□□□□□ -1.99
RPN1YHR027C SNT309Q06091 175 aaPredicted RBP2.63□□□□□ -1.99
RPN1YHR027C XYL2Q07993 356 aa2.63□□□□□ -1.99
RPN1YHR027C YDL211CQ12121 372 aa2.63□□□□□ -1.99
RPN1YHR027C YPR011CQ12251 326 aa2.63□□□□□ -1.99
RPN1YHR027C PDE1P22434 369 aa2.62□□□□□ -1.99
RPN1YHR027C VMA3P25515 160 aa2.62□□□□□ -1.99
RPN1YHR027C YKL044WP36092 106 aa2.62□□□□□ -1.99
RPN1YHR027C FMP46P36141 133 aaKnown RBP2.62□□□□□ -1.99
RPN1YHR027C YIL163CP40448 117 aa2.62□□□□□ -1.99
RPN1YHR027C UBC9P50623 157 aaPredicted RBP2.62□□□□□ -1.99
RPN1YHR027C CAX4P53223 239 aa2.62□□□□□ -1.99
RPN1YHR027C YLR152CP54072 576 aa2.62□□□□□ -1.99
RPN1YHR027C HPF1Q05164 967 aa2.62□□□□□ -1.99
RPN1YHR027C GEP3Q08622 556 aa2.62□□□□□ -1.99
RPN1YHR027C YOR292CQ08743 309 aa2.62□□□□□ -1.99
RPN1YHR027C BOL1Q3E793 110 aa2.62□□□□□ -1.99
RPN1YHR027C KTI11Q3E840 82 aa2.62□□□□□ -1.99
RPN1YHR027C QCR9P22289 66 aa2.62□□□□□ -1.99
RPN1YHR027C REC114P32841 428 aa2.62□□□□□ -1.99
RPN1YHR027C MRPS5P33759 307 aa2.62□□□□□ -1.99
RPN1YHR027C HST4P53688 370 aa2.62□□□□□ -1.99
RPN1YHR027C ERG13P54839 491 aaKnown RBP2.62□□□□□ -1.99
RPN1YHR027C YMR103CQ04436 120 aa2.62□□□□□ -1.99
RPN1YHR027C RFM1Q12192 310 aa2.62□□□□□ -1.99
RPN1YHR027C YMR31P19955 123 aa2.61□□□□□ -1.99
RPN1YHR027C SVP26P38869 228 aa2.61□□□□□ -1.99
RPN1YHR027C MRPL49P40858 161 aaPredicted RBP2.61□□□□□ -1.99
RPN1YHR027C YNL143CP53908 130 aa2.61□□□□□ -1.99
RPN1YHR027C SNP1Q00916 300 aaPredicted RBP2.61□□□□□ -1.99
RPN1YHR027C YMR007WQ03675 126 aa2.61□□□□□ -1.99
RPN1YHR027C YMR316C-AI2HB70 103 aa2.61□□□□□ -1.99
RPN1YHR027C ERV1P27882 189 aa2.61□□□□□ -1.99
RPN1YHR027C OM14P38325 134 aa2.61□□□□□ -1.99
RPN1YHR027C GON7P46984 123 aa2.61□□□□□ -1.99
RPN1YHR027C CIS3P47001 227 aa2.61□□□□□ -1.99
RPN1YHR027C KNH1P50112 268 aa2.61□□□□□ -1.99
RPN1YHR027C YGR164WP53291 111 aa2.61□□□□□ -1.99
RPN1YHR027C YNR071CP53757 342 aa2.61□□□□□ -1.99
RPN1YHR027C YLR042CQ07990 161 aa2.61□□□□□ -1.99
RPN1YHR027C YOR097CQ12274 175 aaPredicted RBP2.61□□□□□ -1.99
RPN1YHR027C MPD1Q12404 318 aaKnown RBP2.61□□□□□ -1.99
RPN1YHR027C RPS21BQ3E754 87 aaKnown RBP2.61□□□□□ -1.99
RPN1YHR027C RPS21AP0C0V8 87 aaKnown RBP2.61□□□□□ -1.99
RPN1YHR027C MDM10P18409 493 aa2.61□□□□□ -1.99
RPN1YHR027C YCR050CP25630 102 aa2.61□□□□□ -1.99
RPN1YHR027C TOM6P33448 61 aa2.61□□□□□ -1.99
RPN1YHR027C TIM17P39515 158 aa2.61□□□□□ -1.99
RPN1YHR027C DSK2P48510 373 aa2.61□□□□□ -1.99
RPN1YHR027C YGR219WP53307 113 aa2.61□□□□□ -1.99
RPN1YHR027C ROT1Q03691 256 aa2.61□□□□□ -1.99
RPN1YHR027C MCH4Q08268 501 aa2.61□□□□□ -1.99
RPN1YHR027C HNT3Q08702 217 aa2.61□□□□□ -1.99
RPN1YHR027C USV1Q12132 391 aa2.61□□□□□ -1.99
RPN1YHR027C RPL2AP0CX45 254 aaKnown RBP2.6□□□□□ -1.99
RPN1YHR027C RPL2BP0CX46 254 aaKnown RBP2.6□□□□□ -1.99
RPN1YHR027C RPS16AP0CX51 143 aaKnown RBP2.6□□□□□ -1.99
RPN1YHR027C RPS16BP0CX52 143 aaKnown RBP2.6□□□□□ -1.99
RPN1YHR027C IML3P38265 245 aa2.6□□□□□ -1.99
RPN1YHR027C ECM34P38728 170 aa2.6□□□□□ -1.99
RPN1YHR027C GLE2P40066 365 aa2.6□□□□□ -1.99
Retrieved 100 of 5,963 RNA–protein pairs in 64.3 ms