RNA–Protein interactions for RNA: YGR009C

SEC9, Transcript of t-SNARE protein required for secretory vesicle-plasma membrane fusion, yeastyeast

Gene SEC9, Length 1,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC9YGR009C WWM1P43582 211 aaKnown RBP4.08□□□□□ -1.76
SEC9YGR009C DSK2P48510 373 aa4.08□□□□□ -1.76
SEC9YGR009C ENV10Q99382 181 aa4.08□□□□□ -1.76
SEC9YGR009C PAN1P32521 1480 aa4.07□□□□□ -1.76
SEC9YGR009C MID2P36027 376 aa4.07□□□□□ -1.76
SEC9YGR009C PHO88P38264 188 aaPredicted RBP4.07□□□□□ -1.76
SEC9YGR009C GGC1P38988 300 aa4.07□□□□□ -1.76
SEC9YGR009C SDS23P53172 527 aa4.07□□□□□ -1.76
SEC9YGR009C SMD1Q02260 146 aaPredicted RBP4.07□□□□□ -1.76
SEC9YGR009C ZRT3P34240 503 aa4.07□□□□□ -1.76
SEC9YGR009C ANS1P38832 159 aa4.07□□□□□ -1.76
SEC9YGR009C PAU15P40585 124 aa4.07□□□□□ -1.76
SEC9YGR009C ADD37Q03233 198 aa4.07□□□□□ -1.76
SEC9YGR009C AVO2Q04749 426 aa4.07□□□□□ -1.76
SEC9YGR009C YOR186WQ08560 144 aa4.07□□□□□ -1.76
SEC9YGR009C HSP12P22943 109 aaKnown RBP4.06□□□□□ -1.76
SEC9YGR009C LDB16P25587 256 aa4.06□□□□□ -1.76
SEC9YGR009C MRPL39P36533 70 aa4.06□□□□□ -1.76
SEC9YGR009C YHL018WP38744 120 aaPredicted RBP4.06□□□□□ -1.76
SEC9YGR009C MSA1Q08471 629 aa4.06□□□□□ -1.76
SEC9YGR009C POC4Q12245 148 aaPredicted RBP4.06□□□□□ -1.76
SEC9YGR009C DAD1Q12248 94 aa4.06□□□□□ -1.76
SEC9YGR009C YOR376W-AQ3E805 51 aa4.06□□□□□ -1.76
SEC9YGR009C YHR139C-AO13536 103 aa4.05□□□□□ -1.76
SEC9YGR009C UBC4P15731 148 aa4.05□□□□□ -1.76
SEC9YGR009C YCR099CP25657 155 aa4.05□□□□□ -1.76
SEC9YGR009C YIL169CP40442 995 aa4.05□□□□□ -1.76
SEC9YGR009C YMR187CQ03236 431 aa4.05□□□□□ -1.76
SEC9YGR009C YDL242WQ07746 117 aa4.05□□□□□ -1.76
SEC9YGR009C YDL157CQ12082 118 aa4.05□□□□□ -1.76
SEC9YGR009C YOL162WP0CF19 215 aa4.05□□□□□ -1.76
SEC9YGR009C KRE1P17260 313 aa4.05□□□□□ -1.76
SEC9YGR009C SIM1P40472 476 aa4.05□□□□□ -1.76
SEC9YGR009C YOR292CQ08743 309 aa4.05□□□□□ -1.76
SEC9YGR009C TY3B-IQ7LHG5 1498 aaKnown RBP4.05□□□□□ -1.76
SEC9YGR009C NRG2P38082 220 aa4.04□□□□□ -1.76
SEC9YGR009C GPI18P38211 433 aa4.04□□□□□ -1.76
SEC9YGR009C CUZ1P53899 274 aa4.04□□□□□ -1.76
SEC9YGR009C EST3Q03096 181 aa4.04□□□□□ -1.76
SEC9YGR009C IRC25Q07951 179 aa4.04□□□□□ -1.76
SEC9YGR009C YDL211CQ12121 372 aa4.04□□□□□ -1.76
SEC9YGR009C BCK1Q01389 1478 aa4.04□□□□□ -1.76
SEC9YGR009C RPA12P32529 125 aaKnown RBP4.03□□□□□ -1.76
SEC9YGR009C PCL5P38794 229 aa4.03□□□□□ -1.76
SEC9YGR009C YGL193CP53097 103 aa4.03□□□□□ -1.76
SEC9YGR009C MET32Q12041 191 aa4.03□□□□□ -1.76
SEC9YGR009C MIC10Q96VH5 97 aa4.03□□□□□ -1.76
SEC9YGR009C ATG40Q99325 256 aa4.03□□□□□ -1.76
SEC9YGR009C PUB1P32588 453 aaKnown RBP RIP-Chip data4.03□□□□□ -1.76not detected
SEC9YGR009C TIM17P39515 158 aa4.03□□□□□ -1.76
SEC9YGR009C SKI6P46948 246 aaPredicted RBP4.03□□□□□ -1.76
SEC9YGR009C ANT1Q06497 328 aa4.03□□□□□ -1.76
SEC9YGR009C TY4B-HP0C2J7 1802 aa4.02□□□□□ -1.77
SEC9YGR009C CYC1P00044 109 aaPredicted RBP4.02□□□□□ -1.77
SEC9YGR009C PAU19P0CE85 124 aa4.02□□□□□ -1.77
SEC9YGR009C PAU21P0CE86 164 aa4.02□□□□□ -1.77
SEC9YGR009C PAU22P0CE87 164 aa4.02□□□□□ -1.77
SEC9YGR009C PAU3P25610 124 aa4.02□□□□□ -1.77
SEC9YGR009C ECM34P38728 170 aa4.02□□□□□ -1.77
SEC9YGR009C GCV3P39726 170 aaPredicted RBP4.02□□□□□ -1.77
SEC9YGR009C YNL200CP40165 246 aaKnown RBP4.02□□□□□ -1.77
SEC9YGR009C TES1P41903 349 aaKnown RBP4.02□□□□□ -1.77
SEC9YGR009C VPS25P47142 202 aa4.02□□□□□ -1.77
SEC9YGR009C YGR018CP53211 109 aa4.02□□□□□ -1.77
SEC9YGR009C SUN4P53616 420 aa4.02□□□□□ -1.77
SEC9YGR009C NDD1Q08887 554 aa4.02□□□□□ -1.77
SEC9YGR009C YLR112WQ12130 139 aa4.02□□□□□ -1.77
SEC9YGR009C YDR119W-AQ2V2P9 66 aa4.02□□□□□ -1.77
SEC9YGR009C RPL40AP0CH08 128 aaKnown RBP4.02□□□□□ -1.77
SEC9YGR009C RPL40BP0CH09 128 aaKnown RBP4.02□□□□□ -1.77
SEC9YGR009C SVP26P38869 228 aa4.02□□□□□ -1.77
SEC9YGR009C NSA2P40078 261 aaKnown RBP4.02□□□□□ -1.77
SEC9YGR009C DFG10P40526 253 aa4.02□□□□□ -1.77
SEC9YGR009C DFM1Q12743 341 aaKnown RBP4.02□□□□□ -1.77
SEC9YGR009C YIL102C-AQ2V2P5 75 aa4.02□□□□□ -1.77
SEC9YGR009C YLR363W-AQ3E747 85 aa4.02□□□□□ -1.77
SEC9YGR009C BNI1P41832 1953 aa4.01□□□□□ -1.77
SEC9YGR009C MRP10O75012 95 aa4.01□□□□□ -1.77
SEC9YGR009C SPS100P13130 326 aa4.01□□□□□ -1.77
SEC9YGR009C RPL16AP26784 199 aaKnown RBP4.01□□□□□ -1.77
SEC9YGR009C AHP1P38013 176 aaKnown RBP4.01□□□□□ -1.77
SEC9YGR009C MRPS9P38120 278 aa4.01□□□□□ -1.77
SEC9YGR009C SNF2P22082 1703 aa4.01□□□□□ -1.77
SEC9YGR009C RPL15AP05748 204 aaKnown RBP4□□□□□ -1.77
SEC9YGR009C RPL22AP05749 121 aaKnown RBP4□□□□□ -1.77
SEC9YGR009C ERG4P25340 473 aa4□□□□□ -1.77
SEC9YGR009C TOM6P33448 61 aa4□□□□□ -1.77
SEC9YGR009C SWD3P38123 315 aa4□□□□□ -1.77
SEC9YGR009C PIR5P46999 287 aa4□□□□□ -1.77
SEC9YGR009C MPC1P53157 130 aaKnown RBP4□□□□□ -1.77
SEC9YGR009C RPL15BP54780 204 aaPredicted RBP4□□□□□ -1.77
SEC9YGR009C RRT7Q07829 113 aa4□□□□□ -1.77
SEC9YGR009C NAG1Q8TGN9 163 aa4□□□□□ -1.77
SEC9YGR009C RIM2P38127 377 aa4□□□□□ -1.77
SEC9YGR009C YBR292CP38357 123 aa4□□□□□ -1.77
SEC9YGR009C HTD2P38790 280 aaKnown RBP4□□□□□ -1.77
SEC9YGR009C PCP1P53259 346 aa4□□□□□ -1.77
SEC9YGR009C DDR48P18899 430 aaKnown RBP3.99□□□□□ -1.77
SEC9YGR009C MDH2P22133 377 aa3.99□□□□□ -1.77
SEC9YGR009C PET8P38921 284 aa3.99□□□□□ -1.77
Retrieved 100 of 5,963 RNA–protein pairs in 25.6 ms