RNA–Protein interactions for RNA: YEL012W

UBC8, Transcript of Ubiquitin-conjugating enzyme that regulates gluconeogenesis, yeast

Gene UBC8, Length 657 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBC8	YEL012W	YCR001W	P25347	104 aa		2.98	□□□□□ -1.93
UBC8	YEL012W	RRT1	P38192	103 aa		2.98	□□□□□ -1.93
UBC8	YEL012W	PET8	P38921	284 aa		2.98	□□□□□ -1.93
UBC8	YEL012W	PET100	P38958	111 aa		2.98	□□□□□ -1.93
UBC8	YEL012W	GLE2	P40066	365 aa		2.98	□□□□□ -1.93
UBC8	YEL012W	COX16	P47081	118 aa		2.98	□□□□□ -1.93
UBC8	YEL012W	ARO8	P53090	500 aa	Known RBP	2.98	□□□□□ -1.93
UBC8	YEL012W	SSU72	P53538	206 aa	Predicted RBP	2.98	□□□□□ -1.93
UBC8	YEL012W	GIM3	P53900	129 aa		2.98	□□□□□ -1.93
UBC8	YEL012W	MRX11	Q03079	207 aa		2.98	□□□□□ -1.93
UBC8	YEL012W	SCP1	Q08873	200 aa		2.98	□□□□□ -1.93
UBC8	YEL012W	RAD28	Q12021	506 aa		2.98	□□□□□ -1.93
UBC8	YEL012W	YGL258W-A	Q3E740	77 aa		2.98	□□□□□ -1.93
UBC8	YEL012W	YOL085C	Q99345	113 aa		2.98	□□□□□ -1.93
UBC8	YEL012W	ZRT1	P32804	376 aa		2.97	□□□□□ -1.93
UBC8	YEL012W	PAN3	P36102	679 aa	Predicted RBP	2.97	□□□□□ -1.93
UBC8	YEL012W	GOS1	P38736	223 aa		2.97	□□□□□ -1.93
UBC8	YEL012W	ADD37	Q03233	198 aa		2.97	□□□□□ -1.93
UBC8	YEL012W	YMR244W	Q04018	355 aa		2.97	□□□□□ -1.93
UBC8	YEL012W	YOR283W	Q12040	230 aa	Known RBP	2.97	□□□□□ -1.93
UBC8	YEL012W	ATG31	Q12421	196 aa		2.97	□□□□□ -1.93
UBC8	YEL012W	FMP16	Q12497	93 aa		2.97	□□□□□ -1.93
UBC8	YEL012W	SUS1	Q6WNK7	96 aa		2.97	□□□□□ -1.93
UBC8	YEL012W	KTI12	P34253	313 aa	Known RBP	2.96	□□□□□ -1.94
UBC8	YEL012W	UPS2	P35200	230 aa		2.96	□□□□□ -1.94
UBC8	YEL012W	YBL071C	P38185	102 aa		2.96	□□□□□ -1.94
UBC8	YEL012W	YPC1	P38298	316 aa		2.96	□□□□□ -1.94
UBC8	YEL012W	SNF11	P38956	169 aa		2.96	□□□□□ -1.94
UBC8	YEL012W	HPA3	P39979	161 aa		2.96	□□□□□ -1.94
UBC8	YEL012W	NSA2	P40078	261 aa	Known RBP	2.96	□□□□□ -1.94
UBC8	YEL012W	GVP36	P40531	326 aa	Known RBP	2.96	□□□□□ -1.94
UBC8	YEL012W	YIR035C	P40579	254 aa		2.96	□□□□□ -1.94
UBC8	YEL012W	YGR050C	P53231	118 aa		2.96	□□□□□ -1.94
UBC8	YEL012W	YNG1	Q08465	219 aa		2.96	□□□□□ -1.94
UBC8	YEL012W	POC4	Q12245	148 aa	Predicted RBP	2.96	□□□□□ -1.94
UBC8	YEL012W	RPL31A	P0C2H8	113 aa	Known RBP	2.95	□□□□□ -1.94
UBC8	YEL012W	YHR213W	P0CI67	198 aa		2.95	□□□□□ -1.94
UBC8	YEL012W	YER135C	P40082	130 aa		2.95	□□□□□ -1.94
UBC8	YEL012W	YIP3	P53633	176 aa		2.95	□□□□□ -1.94
UBC8	YEL012W	MRPS8	Q03799	155 aa		2.95	□□□□□ -1.94
UBC8	YEL012W	FRQ1	Q06389	190 aa		2.95	□□□□□ -1.94
UBC8	YEL012W	TPI1	P00942	248 aa	Known RBP	2.94	□□□□□ -1.94
UBC8	YEL012W	VMA22	P38784	181 aa		2.94	□□□□□ -1.94
UBC8	YEL012W	BDH1	P39714	382 aa		2.94	□□□□□ -1.94
UBC8	YEL012W	GPI2	P46961	280 aa		2.94	□□□□□ -1.94
UBC8	YEL012W	SDS23	P53172	527 aa		2.94	□□□□□ -1.94
UBC8	YEL012W	VPS28	Q02767	242 aa		2.94	□□□□□ -1.94
UBC8	YEL012W	SGF11	Q03067	99 aa		2.94	□□□□□ -1.94
UBC8	YEL012W	PAM18	Q07914	168 aa		2.94	□□□□□ -1.94
UBC8	YEL012W	YOR385W	Q08909	290 aa		2.94	□□□□□ -1.94
UBC8	YEL012W	IES3	Q12345	250 aa		2.94	□□□□□ -1.94
UBC8	YEL012W	YMR316C-A	I2HB70	103 aa		2.93	□□□□□ -1.94
UBC8	YEL012W	ERV15	P38312	142 aa		2.93	□□□□□ -1.94
UBC8	YEL012W	RRT13	P40042	185 aa		2.93	□□□□□ -1.94
UBC8	YEL012W	IMP2	P46972	177 aa		2.93	□□□□□ -1.94
UBC8	YEL012W	LCL2	Q08045	131 aa		2.93	□□□□□ -1.94
UBC8	YEL012W	MSH5	Q12175	901 aa		2.93	□□□□□ -1.94
UBC8	YEL012W	UTP23	Q12339	254 aa	Known RBP	2.93	□□□□□ -1.94
UBC8	YEL012W	YNL146C-A	Q3E7Z1	64 aa		2.93	□□□□□ -1.94
UBC8	YEL012W	CDC7	P06243	507 aa		2.92	□□□□□ -1.94
UBC8	YEL012W	QCR2	P07257	368 aa		2.92	□□□□□ -1.94
UBC8	YEL012W	MRPL20	P22354	195 aa	Predicted RBP	2.92	□□□□□ -1.94
UBC8	YEL012W	SNX4	P47057	423 aa		2.92	□□□□□ -1.94
UBC8	YEL012W	YJR015W	P47090	510 aa		2.92	□□□□□ -1.94
UBC8	YEL012W	YNR066C	P53752	436 aa		2.92	□□□□□ -1.94
UBC8	YEL012W	YOL160W	Q08321	113 aa		2.92	□□□□□ -1.94
UBC8	YEL012W	VAM10	Q08474	114 aa		2.92	□□□□□ -1.94
UBC8	YEL012W	YAL067W-A	Q8TGK6	75 aa		2.92	□□□□□ -1.94
UBC8	YEL012W	FCY2	P17064	533 aa		2.91	□□□□□ -1.94
UBC8	YEL012W	RPL16B	P26785	198 aa	Known RBP	2.91	□□□□□ -1.94
UBC8	YEL012W	RTC3	P38804	111 aa	Predicted RBP	2.91	□□□□□ -1.94
UBC8	YEL012W	AIM25	P47140	327 aa		2.91	□□□□□ -1.94
UBC8	YEL012W	NIF3	P53081	288 aa		2.91	□□□□□ -1.94
UBC8	YEL012W	BER1	Q06688	274 aa	Known RBP	2.91	□□□□□ -1.94
UBC8	YEL012W	LSO2	Q3E772	92 aa	Known RBP	2.91	□□□□□ -1.94
UBC8	YEL012W	RPS11A	P0CX47	156 aa	Known RBP	2.9	□□□□□ -1.95
UBC8	YEL012W	RPS11B	P0CX48	156 aa	Known RBP	2.9	□□□□□ -1.95
UBC8	YEL012W	MRP17	P28778	131 aa		2.9	□□□□□ -1.95
UBC8	YEL012W	SHB17	P36136	271 aa	Known RBP	2.9	□□□□□ -1.95
UBC8	YEL012W	LSM2	P38203	95 aa	Known RBP	2.9	□□□□□ -1.95
UBC8	YEL012W	FMP23	P38231	175 aa		2.9	□□□□□ -1.95
UBC8	YEL012W	CSH1	P38287	376 aa		2.9	□□□□□ -1.95
UBC8	YEL012W	MBA1	P38300	278 aa		2.9	□□□□□ -1.95
UBC8	YEL012W	RBL2	P48606	106 aa	Known RBP	2.9	□□□□□ -1.95
UBC8	YEL012W	HST4	P53688	370 aa		2.9	□□□□□ -1.95
UBC8	YEL012W	TMA20	P89886	181 aa	Predicted RBP	2.9	□□□□□ -1.95
UBC8	YEL012W	YCT1	Q12235	531 aa		2.9	□□□□□ -1.95
UBC8	YEL012W	YPS3	Q12303	508 aa		2.9	□□□□□ -1.95
UBC8	YEL012W	RDI1	Q12434	202 aa		2.9	□□□□□ -1.95
UBC8	YEL012W	COA2	Q3E823	68 aa		2.9	□□□□□ -1.95
UBC8	YEL012W	RPS25B	P0C0T4	108 aa	Known RBP	2.89	□□□□□ -1.95
UBC8	YEL012W	RPL2A	P0CX45	254 aa	Known RBP	2.89	□□□□□ -1.95
UBC8	YEL012W	RPL2B	P0CX46	254 aa	Known RBP	2.89	□□□□□ -1.95
UBC8	YEL012W	ANB1	P19211	157 aa		2.89	□□□□□ -1.95
UBC8	YEL012W	SEC22	P22214	214 aa		2.89	□□□□□ -1.95
UBC8	YEL012W	SER2	P42941	309 aa		2.89	□□□□□ -1.95
UBC8	YEL012W	LSM1	P47017	172 aa	Known RBP	2.89	□□□□□ -1.95
UBC8	YEL012W	CWC23	P52868	283 aa	Predicted RBP	2.89	□□□□□ -1.95
UBC8	YEL012W	CGR1	P53188	120 aa		2.89	□□□□□ -1.95
UBC8	YEL012W	FMP41	P53889	259 aa	Known RBP	2.89	□□□□□ -1.95

Retrieved 100 of 5,963 RNA–protein pairs in 21.5 ms