RNA–Protein interactions for RNA: YDR364C

CDC40, Transcript of Pre-mRNA splicing factor, yeastyeast

Gene CDC40, Length 1,368 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC40YDR364C ATG5Q12380 294 aa2.61□□□□□ -1.99
CDC40YDR364C BOL1Q3E793 110 aa2.61□□□□□ -1.99
CDC40YDR364C COA2Q3E823 68 aa2.61□□□□□ -1.99
CDC40YDR364C RPL9AP05738 191 aaKnown RBP2.6□□□□□ -1.99
CDC40YDR364C RPL43AP0CX25 92 aaKnown RBP2.6□□□□□ -1.99
CDC40YDR364C RPL43BP0CX26 92 aa2.6□□□□□ -1.99
CDC40YDR364C TCA17P32613 152 aa2.6□□□□□ -1.99
CDC40YDR364C CPR5P35176 225 aa2.6□□□□□ -1.99
CDC40YDR364C ECM31P38122 312 aa2.6□□□□□ -1.99
CDC40YDR364C SHG1P38337 142 aa2.6□□□□□ -1.99
CDC40YDR364C YHR138CP38841 114 aaPredicted RBP2.6□□□□□ -1.99
CDC40YDR364C CTR2P38865 189 aa2.6□□□□□ -1.99
CDC40YDR364C YEA4P40004 342 aa2.6□□□□□ -1.99
CDC40YDR364C EMC5P40540 141 aa2.6□□□□□ -1.99
CDC40YDR364C SNN1P48232 102 aa2.6□□□□□ -1.99
CDC40YDR364C RPL9BP51401 191 aaKnown RBP2.6□□□□□ -1.99
CDC40YDR364C MGA1P53050 456 aa2.6□□□□□ -1.99
CDC40YDR364C APJ1P53940 528 aa2.6□□□□□ -1.99
CDC40YDR364C MRX11Q03079 207 aa2.6□□□□□ -1.99
CDC40YDR364C HRD1Q08109 551 aa2.6□□□□□ -1.99
CDC40YDR364C TMC1Q08422 150 aaPredicted RBP2.6□□□□□ -1.99
CDC40YDR364C DCN1Q12395 269 aa2.6□□□□□ -1.99
CDC40YDR364C AGC1Q12482 902 aa2.6□□□□□ -1.99
CDC40YDR364C YCL048W-AQ2V2Q2 79 aa2.6□□□□□ -1.99
CDC40YDR364C VMA9Q3E7B6 73 aa2.6□□□□□ -1.99
CDC40YDR364C YMR105W-AQ8TGS8 64 aa2.6□□□□□ -1.99
CDC40YDR364C YHR213W-AQ8TGT4 77 aa2.6□□□□□ -1.99
CDC40YDR364C FAS1P07149 2051 aaKnown RBP2.59□□□□□ -1.99
CDC40YDR364C ROX3P25046 220 aa2.59□□□□□ -2
CDC40YDR364C SRB6P32570 121 aa2.59□□□□□ -2
CDC40YDR364C NTF2P33331 125 aaKnown RBP2.59□□□□□ -2
CDC40YDR364C MCM22P47167 239 aa2.59□□□□□ -2
CDC40YDR364C ERG25P53045 309 aa2.59□□□□□ -2
CDC40YDR364C YGR050CP53231 118 aa2.59□□□□□ -2
CDC40YDR364C YNR064CP53750 290 aa2.59□□□□□ -2
CDC40YDR364C PDR17P53844 350 aa2.59□□□□□ -2
CDC40YDR364C FYV6P53913 173 aa2.59□□□□□ -2
CDC40YDR364C YCL001W-AP87012 153 aa2.59□□□□□ -2
CDC40YDR364C YMR082CQ04276 118 aa2.59□□□□□ -2
CDC40YDR364C SPG4Q04438 115 aa2.59□□□□□ -2
CDC40YDR364C YPL264CQ08980 353 aa2.59□□□□□ -2
CDC40YDR364C ERV2Q12284 196 aa2.59□□□□□ -2
CDC40YDR364C YOS1Q3E834 85 aa2.59□□□□□ -2
CDC40YDR364C FCY2P17064 533 aa2.58□□□□□ -2
CDC40YDR364C YCR025CP25352 136 aa2.58□□□□□ -2
CDC40YDR364C CDC50P25656 391 aa2.58□□□□□ -2
CDC40YDR364C GPI18P38211 433 aa2.58□□□□□ -2
CDC40YDR364C YBR292CP38357 123 aa2.58□□□□□ -2
CDC40YDR364C YHL044WP38727 235 aa2.58□□□□□ -2
CDC40YDR364C MIG3P39943 394 aa2.58□□□□□ -2
CDC40YDR364C ARP3P47117 449 aaKnown RBP2.58□□□□□ -2
CDC40YDR364C FMP41P53889 259 aaKnown RBP2.58□□□□□ -2
CDC40YDR364C YLR179CQ06252 201 aaKnown RBP2.58□□□□□ -2
CDC40YDR364C YOR015WQ12169 119 aa2.58□□□□□ -2
CDC40YDR364C COX19Q3E731 98 aa2.58□□□□□ -2
CDC40YDR364C URA5P13298 226 aaKnown RBP2.57□□□□□ -2
CDC40YDR364C SPO13P23624 291 aa2.57□□□□□ -2
CDC40YDR364C ARO2P28777 376 aaKnown RBP2.57□□□□□ -2
CDC40YDR364C SPS18P32572 300 aa2.57□□□□□ -2
CDC40YDR364C IGD1P43598 195 aa2.57□□□□□ -2
CDC40YDR364C YJR056CP47115 236 aa2.57□□□□□ -2
CDC40YDR364C SBH2P52871 88 aa2.57□□□□□ -2
CDC40YDR364C DYN2Q02647 92 aa2.57□□□□□ -2
CDC40YDR364C YMR166CQ03829 368 aa2.57□□□□□ -2
CDC40YDR364C LOA1Q06508 300 aa2.57□□□□□ -2
CDC40YDR364C CSI2Q08054 341 aa2.57□□□□□ -2
CDC40YDR364C PRR2Q12310 699 aa2.57□□□□□ -2
CDC40YDR364C YGL258W-AQ3E740 77 aa2.57□□□□□ -2
CDC40YDR364C RPS25BP0C0T4 108 aaKnown RBP2.56□□□□□ -2
CDC40YDR364C QCR9P22289 66 aa2.56□□□□□ -2
CDC40YDR364C UPS2P35200 230 aa2.56□□□□□ -2
CDC40YDR364C NSA2P40078 261 aaKnown RBP2.56□□□□□ -2
CDC40YDR364C YGR269WP40326 108 aa2.56□□□□□ -2
CDC40YDR364C SSU72P53538 206 aaPredicted RBP2.56□□□□□ -2
CDC40YDR364C TMA23Q03525 211 aa2.56□□□□□ -2
CDC40YDR364C YMR244WQ04018 355 aa2.56□□□□□ -2
CDC40YDR364C FRQ1Q06389 190 aa2.56□□□□□ -2
CDC40YDR364C POC4Q12245 148 aaPredicted RBP2.56□□□□□ -2
CDC40YDR364C YPS3Q12303 508 aa2.56□□□□□ -2
CDC40YDR364C GEP5Q12393 293 aa2.56□□□□□ -2
CDC40YDR364C RPS25AQ3E792 108 aaPredicted RBP2.56□□□□□ -2
CDC40YDR364C CNB1P25296 175 aa2.55□□□□□ -2
CDC40YDR364C AHT1P29589 182 aa2.55□□□□□ -2
CDC40YDR364C YKL075CP36083 450 aa2.55□□□□□ -2
CDC40YDR364C SHB17P36136 271 aaKnown RBP2.55□□□□□ -2
CDC40YDR364C KRE9P39005 276 aa2.55□□□□□ -2
CDC40YDR364C SPC25P40014 221 aa2.55□□□□□ -2
CDC40YDR364C POG1P40473 351 aa2.55□□□□□ -2
CDC40YDR364C YIR020CP40575 100 aa2.55□□□□□ -2
CDC40YDR364C SMD3P43321 101 aaKnown RBP2.55□□□□□ -2
CDC40YDR364C YGR018CP53211 109 aa2.55□□□□□ -2
CDC40YDR364C YMR007WQ03675 126 aa2.55□□□□□ -2
CDC40YDR364C YML108WQ03759 105 aa2.55□□□□□ -2
CDC40YDR364C YHP1Q04116 353 aa2.55□□□□□ -2
CDC40YDR364C ARR2Q06597 130 aa2.55□□□□□ -2
CDC40YDR364C ATO3Q12359 275 aa2.55□□□□□ -2
CDC40YDR364C RAX2Q12465 1220 aa2.55□□□□□ -2
CDC40YDR364C PCC1Q3E833 88 aa2.55□□□□□ -2
CDC40YDR364C Q0297Q9ZZV8 51 aa2.55□□□□□ -2
CDC40YDR364C ACP1P32463 125 aa2.54□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 25.6 ms