RNA–Protein interactions for RNA: YDR233C

RTN1, Transcript of Reticulon protein, yeastyeast

Gene RTN1, Length 888 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTN1YDR233C SRP14P38985 146 aa2.22□□□□□ -2.05
RTN1YDR233C HKR1P41809 1802 aa2.21□□□□□ -2.05
RTN1YDR233C RPL22AP05749 121 aaKnown RBP2.21□□□□□ -2.06
RTN1YDR233C GSP2P32836 220 aaKnown RBP2.21□□□□□ -2.06
RTN1YDR233C RRT1P38192 103 aa2.21□□□□□ -2.06
RTN1YDR233C YNL200CP40165 246 aaKnown RBP2.21□□□□□ -2.06
RTN1YDR233C VAR1P02381 398 aa2.2□□□□□ -2.06
RTN1YDR233C STP22P25604 385 aa2.2□□□□□ -2.06
RTN1YDR233C ALB1P47019 175 aaPredicted RBP2.2□□□□□ -2.06
RTN1YDR233C YNL140CP53910 189 aa2.2□□□□□ -2.06
RTN1YDR233C PEX11Q12462 236 aa2.2□□□□□ -2.06
RTN1YDR233C DUR1,2P32528 1835 aaKnown RBP2.19□□□□□ -2.06
RTN1YDR233C TTI2P47168 421 aa2.19□□□□□ -2.06
RTN1YDR233C GIM5Q04493 163 aa2.19□□□□□ -2.06
RTN1YDR233C YMR321CQ04898 105 aa2.19□□□□□ -2.06
RTN1YDR233C YLR050CQ12155 161 aaKnown RBP2.19□□□□□ -2.06
RTN1YDR233C DDP1Q99321 188 aaKnown RBP2.19□□□□□ -2.06
RTN1YDR233C YCR023CP25351 611 aa2.18□□□□□ -2.06
RTN1YDR233C YCL042WP25572 119 aa2.18□□□□□ -2.06
RTN1YDR233C RME1P32338 300 aaKnown RBP2.17□□□□□ -2.06
RTN1YDR233C YEL067CP39978 195 aa2.17□□□□□ -2.06
RTN1YDR233C MPM1P40364 252 aa2.17□□□□□ -2.06
RTN1YDR233C RRP17Q04031 235 aaPredicted RBP2.17□□□□□ -2.06
RTN1YDR233C UPS1Q05776 175 aa2.17□□□□□ -2.06
RTN1YDR233C YOR015WQ12169 119 aa2.17□□□□□ -2.06
RTN1YDR233C YHR212W-AP0CX91 67 aa2.16□□□□□ -2.06
RTN1YDR233C CSH1P38287 376 aa2.16□□□□□ -2.06
RTN1YDR233C HSK3P69852 69 aa2.16□□□□□ -2.06
RTN1YDR233C PIR1Q03178 341 aa2.16□□□□□ -2.06
RTN1YDR233C YPR127WQ06494 345 aa2.16□□□□□ -2.06
RTN1YDR233C YOR381W-AQ3E804 55 aa2.16□□□□□ -2.06
RTN1YDR233C SLH1P53327 1967 aaKnown RBP2.16□□□□□ -2.06
RTN1YDR233C NSE4P43124 402 aa2.15□□□□□ -2.07
RTN1YDR233C TIM8P57744 87 aa2.15□□□□□ -2.07
RTN1YDR233C UPS3Q04006 179 aa2.15□□□□□ -2.07
RTN1YDR233C YER121WP40076 114 aa2.14□□□□□ -2.07
RTN1YDR233C DML1Q03652 475 aa2.14□□□□□ -2.07
RTN1YDR233C YOR214CQ12282 236 aa2.14□□□□□ -2.07
RTN1YDR233C COA3Q3E7B2 85 aa2.14□□□□□ -2.07
RTN1YDR233C SEN2P16658 377 aa2.13□□□□□ -2.07
RTN1YDR233C STF2P16965 84 aa2.13□□□□□ -2.07
RTN1YDR233C PHO13P19881 312 aa2.13□□□□□ -2.07
RTN1YDR233C HSP30P25619 332 aa2.13□□□□□ -2.07
RTN1YDR233C SOK1P40317 901 aa2.13□□□□□ -2.07
RTN1YDR233C YDR524C-BQ3E6R4 66 aa2.13□□□□□ -2.07
RTN1YDR233C YKR005CQ02203 525 aa2.12□□□□□ -2.07
RTN1YDR233C VPS28Q02767 242 aa2.12□□□□□ -2.07
RTN1YDR233C TLG1Q03322 224 aa2.12□□□□□ -2.07
RTN1YDR233C YHP1Q04116 353 aa2.12□□□□□ -2.07
RTN1YDR233C RIM9Q04734 239 aa2.12□□□□□ -2.07
RTN1YDR233C YGL235WP53071 178 aa2.11□□□□□ -2.07
RTN1YDR233C ATG41Q12048 136 aa2.11□□□□□ -2.07
RTN1YDR233C CMC2Q3E7A4 109 aa2.11□□□□□ -2.07
RTN1YDR233C HAP2P06774 265 aa2.1□□□□□ -2.07
RTN1YDR233C THI74Q04083 370 aa2.1□□□□□ -2.07
RTN1YDR233C ELP6Q04868 273 aa2.1□□□□□ -2.07
RTN1YDR233C TAR1Q8TGM6 124 aa2.1□□□□□ -2.07
RTN1YDR233C VPS51P36116 164 aa2.09□□□□□ -2.07
RTN1YDR233C XPT1P47165 209 aa2.09□□□□□ -2.07
RTN1YDR233C GSC2P40989 1895 aa2.09□□□□□ -2.08
RTN1YDR233C CMD1P06787 147 aaKnown RBP2.08□□□□□ -2.08
RTN1YDR233C ETR1P38071 380 aa2.08□□□□□ -2.08
RTN1YDR233C PLP1Q04004 230 aa2.08□□□□□ -2.08
RTN1YDR233C MYO1P08964 1928 aa2.07□□□□□ -2.08
RTN1YDR233C YBL010CP32788 280 aa2.07□□□□□ -2.08
RTN1YDR233C TIM13P53299 105 aa2.07□□□□□ -2.08
RTN1YDR233C MET31Q03081 177 aa2.07□□□□□ -2.08
RTN1YDR233C NUF2P33895 451 aa2.06□□□□□ -2.08
RTN1YDR233C CCS1P40202 249 aaKnown RBP2.06□□□□□ -2.08
RTN1YDR233C YDR391CQ04170 232 aa2.06□□□□□ -2.08
RTN1YDR233C TAO3P40468 2376 aa2.05□□□□□ -2.08
RTN1YDR233C RAD6P06104 172 aa2.05□□□□□ -2.08
RTN1YDR233C PEX34P25584 144 aa2.05□□□□□ -2.08
RTN1YDR233C UBC6P33296 250 aaPredicted RBP2.05□□□□□ -2.08
RTN1YDR233C YRA2P36036 203 aaKnown RBP RIP-Chip data2.05□□□□□ -2.08not detected
RTN1YDR233C MOB1P40484 314 aa2.05□□□□□ -2.08
RTN1YDR233C GLR1P41921 483 aaKnown RBP2.05□□□□□ -2.08
RTN1YDR233C YMR030W-AQ3E760 96 aa2.05□□□□□ -2.08
RTN1YDR233C QCR6P00127 147 aa2.04□□□□□ -2.08
RTN1YDR233C AIM18P38884 321 aa2.04□□□□□ -2.08
RTN1YDR233C YEL073CP39974 107 aa2.04□□□□□ -2.08
RTN1YDR233C YEL028WP39989 153 aa2.04□□□□□ -2.08
RTN1YDR233C PAC10P48363 199 aa2.04□□□□□ -2.08
RTN1YDR233C RPL22BP56628 122 aaKnown RBP2.04□□□□□ -2.08
RTN1YDR233C TOM1Q03280 3268 aa2.04□□□□□ -2.08
RTN1YDR233C YDR278CQ05612 105 aa2.04□□□□□ -2.08
RTN1YDR233C EFG1Q3E705 233 aaKnown RBP2.04□□□□□ -2.08
RTN1YDR233C RIF1P29539 1916 aa2.03□□□□□ -2.08
RTN1YDR233C GRX5Q02784 150 aa2.03□□□□□ -2.08
RTN1YDR233C SYM1Q06563 197 aa2.03□□□□□ -2.08
RTN1YDR233C YBR242WP38331 238 aa2.02□□□□□ -2.09
RTN1YDR233C RDI1Q12434 202 aa2.02□□□□□ -2.09
RTN1YDR233C YDR034W-BQ6Q5X2 51 aa2.02□□□□□ -2.09
RTN1YDR233C UBC8P28263 218 aa2.01□□□□□ -2.09
RTN1YDR233C MRPL15P36523 253 aa2.01□□□□□ -2.09
RTN1YDR233C FES1P38260 290 aa2.01□□□□□ -2.09
RTN1YDR233C NQM1P53228 333 aaPredicted RBP2.01□□□□□ -2.09
RTN1YDR233C SWC7Q06707 132 aa2.01□□□□□ -2.09
RTN1YDR233C LDB18Q07887 179 aa2.01□□□□□ -2.09
RTN1YDR233C OCA6Q12454 224 aa2.01□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 45.5 ms