RNA–Protein interactions for RNA: YDR182W

CDC1, Transcript of Putative lipid phosphatase of the endoplasmic reticulum, yeast

Gene CDC1, Length 1,476 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CDC1	YDR182W	FCF2	Q12035	217 aa	Predicted RBP	4.69	□□□□□ -1.66
CDC1	YDR182W	SCM3	Q12334	223 aa		4.69	□□□□□ -1.66
CDC1	YDR182W	SAR1	P20606	190 aa	Known RBP	4.69	□□□□□ -1.66
CDC1	YDR182W	RPS2	P25443	254 aa	Known RBP	4.69	□□□□□ -1.66
CDC1	YDR182W	MBB1	P39534	108 aa		4.69	□□□□□ -1.66
CDC1	YDR182W	SGF11	Q03067	99 aa		4.69	□□□□□ -1.66
CDC1	YDR182W	AVO2	Q04749	426 aa		4.69	□□□□□ -1.66
CDC1	YDR182W	LOA1	Q06508	300 aa		4.69	□□□□□ -1.66
CDC1	YDR182W	YOL085C	Q99345	113 aa		4.69	□□□□□ -1.66
CDC1	YDR182W	YDR157W	A0A023PZE8	133 aa		4.68	□□□□□ -1.66
CDC1	YDR182W	DDI2	P0CH63	225 aa		4.68	□□□□□ -1.66
CDC1	YDR182W	DDI3	P0CH64	225 aa		4.68	□□□□□ -1.66
CDC1	YDR182W	RPS11A	P0CX47	156 aa	Known RBP	4.68	□□□□□ -1.66
CDC1	YDR182W	RPS11B	P0CX48	156 aa	Known RBP	4.68	□□□□□ -1.66
CDC1	YDR182W	AHT1	P29589	182 aa		4.68	□□□□□ -1.66
CDC1	YDR182W	HUA1	P40325	198 aa		4.68	□□□□□ -1.66
CDC1	YDR182W	DSK2	P48510	373 aa		4.68	□□□□□ -1.66
CDC1	YDR182W	ERV2	Q12284	196 aa		4.68	□□□□□ -1.66
CDC1	YDR182W	YGL194C-A	Q2V2P6	80 aa		4.68	□□□□□ -1.66
CDC1	YDR182W	RPL2A	P0CX45	254 aa	Known RBP	4.67	□□□□□ -1.66
CDC1	YDR182W	RPL2B	P0CX46	254 aa	Known RBP	4.67	□□□□□ -1.66
CDC1	YDR182W	QCR9	P22289	66 aa		4.67	□□□□□ -1.66
CDC1	YDR182W	SNX4	P47057	423 aa		4.67	□□□□□ -1.66
CDC1	YDR182W	TAD2	P47058	250 aa		4.67	□□□□□ -1.66
CDC1	YDR182W	YPR063C	Q12160	140 aa		4.67	□□□□□ -1.66
CDC1	YDR182W	RPB3	P16370	318 aa	Known RBP	4.66	□□□□□ -1.66
CDC1	YDR182W	EMP24	P32803	203 aa	Known RBP	4.66	□□□□□ -1.66
CDC1	YDR182W	YHR022C	P38763	256 aa		4.66	□□□□□ -1.66
CDC1	YDR182W	RPR2	P40571	144 aa		4.66	□□□□□ -1.66
CDC1	YDR182W	FMP41	P53889	259 aa	Known RBP	4.66	□□□□□ -1.66
CDC1	YDR182W	VAM10	Q08474	114 aa		4.66	□□□□□ -1.66
CDC1	YDR182W	FIT2	Q08906	153 aa		4.66	□□□□□ -1.66
CDC1	YDR182W	YPR145C-A	Q2V2P0	78 aa		4.66	□□□□□ -1.66
CDC1	YDR182W	MAG1	P22134	296 aa	Known RBP	4.65	□□□□□ -1.66
CDC1	YDR182W	PHO23	P50947	330 aa		4.65	□□□□□ -1.66
CDC1	YDR182W	CCW12	Q12127	133 aa		4.65	□□□□□ -1.66
CDC1	YDR182W	MRP2	P10663	115 aa	Predicted RBP	4.64	□□□□□ -1.67
CDC1	YDR182W	HSP12	P22943	109 aa	Known RBP	4.64	□□□□□ -1.67
CDC1	YDR182W	ECM25	P32525	599 aa		4.64	□□□□□ -1.67
CDC1	YDR182W	TRS20	P38334	175 aa		4.64	□□□□□ -1.67
CDC1	YDR182W	TOM7	P53507	60 aa		4.64	□□□□□ -1.67
CDC1	YDR182W	YNR066C	P53752	436 aa		4.64	□□□□□ -1.67
CDC1	YDR182W	ATC1	Q04005	294 aa		4.64	□□□□□ -1.67
CDC1	YDR182W	ANT1	Q06497	328 aa		4.64	□□□□□ -1.67
CDC1	YDR182W	YOR015W	Q12169	119 aa		4.64	□□□□□ -1.67
CDC1	YDR182W	MRPL50	P53724	139 aa		4.63	□□□□□ -1.67
CDC1	YDR182W	SDO1	Q07953	250 aa	Known RBP	4.63	□□□□□ -1.67
CDC1	YDR182W	YBR182C-A	Q8TGU6	64 aa		4.63	□□□□□ -1.67
CDC1	YDR182W	DIF1	O13577	133 aa		4.62	□□□□□ -1.67
CDC1	YDR182W	UBI4	P0CG63	381 aa	Known RBP	4.62	□□□□□ -1.67
CDC1	YDR182W	VMA16	P23968	213 aa		4.62	□□□□□ -1.67
CDC1	YDR182W	RPS0A	P32905	252 aa	Known RBP	4.62	□□□□□ -1.67
CDC1	YDR182W	RIB4	P50861	169 aa	Predicted RBP	4.62	□□□□□ -1.67
CDC1	YDR182W	GIS2	P53849	153 aa	Known RBP RIP-Chip data	4.62	□□□□□ -1.67	RIP-Chip
CDC1	YDR182W	MRX11	Q03079	207 aa		4.62	□□□□□ -1.67
CDC1	YDR182W	MRPS17	Q03246	237 aa	Predicted RBP	4.62	□□□□□ -1.67
CDC1	YDR182W	HTB2	P02294	131 aa		4.62	□□□□□ -1.67
CDC1	YDR182W	ASP1	P38986	381 aa	Predicted RBP	4.62	□□□□□ -1.67
CDC1	YDR182W	YMR141C	P40211	102 aa		4.62	□□□□□ -1.67
CDC1	YDR182W	VHS2	P40463	436 aa		4.62	□□□□□ -1.67
CDC1	YDR182W	CAF40	P53829	373 aa		4.62	□□□□□ -1.67
CDC1	YDR182W	ADD37	Q03233	198 aa		4.62	□□□□□ -1.67
CDC1	YDR182W	TMA23	Q03525	211 aa		4.62	□□□□□ -1.67
CDC1	YDR182W	RAV2	Q03956	351 aa		4.62	□□□□□ -1.67
CDC1	YDR182W	GCV3	P39726	170 aa	Predicted RBP	4.61	□□□□□ -1.67
CDC1	YDR182W	GAT4	P40569	121 aa		4.61	□□□□□ -1.67
CDC1	YDR182W	JAC1	P53193	184 aa		4.61	□□□□□ -1.67
CDC1	YDR182W	YPR195C	Q06594	109 aa		4.61	□□□□□ -1.67
CDC1	YDR182W	ATX2	Q12067	313 aa		4.61	□□□□□ -1.67
CDC1	YDR182W	TMA17	Q12513	150 aa		4.61	□□□□□ -1.67
CDC1	YDR182W	MRS1	P07266	363 aa		4.6	□□□□□ -1.67
CDC1	YDR182W	YJR096W	P47137	282 aa		4.6	□□□□□ -1.67
CDC1	YDR182W	YCR075W-A	Q3E830	75 aa		4.6	□□□□□ -1.67
CDC1	YDR182W	YBR292C	P38357	123 aa		4.59	□□□□□ -1.67
CDC1	YDR182W	SPI1	P40092	148 aa		4.59	□□□□□ -1.67
CDC1	YDR182W	MRPL20	P22354	195 aa	Predicted RBP	4.58	□□□□□ -1.68
CDC1	YDR182W	RPL14A	P36105	138 aa	Known RBP	4.58	□□□□□ -1.68
CDC1	YDR182W	MRPL4	P36517	319 aa		4.58	□□□□□ -1.68
CDC1	YDR182W	RPL14B	P38754	138 aa	Known RBP	4.58	□□□□□ -1.68
CDC1	YDR182W	LOC1	P43586	204 aa	Predicted RBP	4.58	□□□□□ -1.68
CDC1	YDR182W	YLR302C	O13544	120 aa		4.57	□□□□□ -1.68
CDC1	YDR182W	VAR1	P02381	398 aa		4.57	□□□□□ -1.68
CDC1	YDR182W	Q0255	P03881	472 aa		4.57	□□□□□ -1.68
CDC1	YDR182W	RPL31B	P0C2H9	113 aa	Known RBP	4.57	□□□□□ -1.68
CDC1	YDR182W	YHR173C	P38864	112 aa		4.57	□□□□□ -1.68
CDC1	YDR182W	SRB7	P47822	140 aa		4.57	□□□□□ -1.68
CDC1	YDR182W	YPS5	P53057	165 aa		4.57	□□□□□ -1.68
CDC1	YDR182W	SME1	Q12330	94 aa	Predicted RBP	4.57	□□□□□ -1.68
CDC1	YDR182W	CPT1	P17898	393 aa		4.56	□□□□□ -1.68
CDC1	YDR182W	YIL163C	P40448	117 aa		4.56	□□□□□ -1.68
CDC1	YDR182W	EMC5	P40540	141 aa		4.56	□□□□□ -1.68
CDC1	YDR182W	YLR415C	O13578	112 aa		4.56	□□□□□ -1.68
CDC1	YDR182W	RNA15	P25299	296 aa	Predicted RBP	4.56	□□□□□ -1.68
CDC1	YDR182W	HMX1	P32339	317 aa		4.56	□□□□□ -1.68
CDC1	YDR182W	RRT13	P40042	185 aa		4.56	□□□□□ -1.68
CDC1	YDR182W	DAD4	P69851	72 aa		4.56	□□□□□ -1.68
CDC1	YDR182W	SNO1	Q03144	224 aa		4.56	□□□□□ -1.68
CDC1	YDR182W	SMD3	P43321	101 aa	Known RBP	4.55	□□□□□ -1.68
CDC1	YDR182W	ATP23	P53722	227 aa		4.55	□□□□□ -1.68
CDC1	YDR182W	YMR253C	Q04835	414 aa		4.55	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 73.6 ms